RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 DBNDD1Q9H9R9 158 aa18.21■□□□□ 0.51
TUBE1-204ENST00000603621 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
TUBE1-204ENST00000603621 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
TUBE1-204ENST00000603621 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
TUBE1-204ENST00000603621 ANKRD18BA2A2Z9 1011 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 RAD17O75943 681 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-204ENST00000603621 HSPA6P17066 643 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 RARSP54136 660 aaKnown RBP18.2■□□□□ 0.5
TUBE1-204ENST00000603621 DOK7Q18PE1 504 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-204ENST00000603621 SMC1BQ8NDV3 1235 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
TUBE1-204ENST00000603621 TAF1DQ9H5J8 278 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-204ENST00000603621 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 XDHP47989 1333 aa18.2■□□□□ 0.5
TUBE1-204ENST00000603621 G3V3G9 751 aa18.19■□□□□ 0.5
TUBE1-204ENST00000603621 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
TUBE1-204ENST00000603621 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
TUBE1-204ENST00000603621 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
TUBE1-204ENST00000603621 FSTL1Q12841 308 aa18.19■□□□□ 0.5
TUBE1-204ENST00000603621 IFIT5Q13325 482 aaKnown RBP18.19■□□□□ 0.5
TUBE1-204ENST00000603621 DCAF8Q5TAQ9 597 aa18.19■□□□□ 0.5
TUBE1-204ENST00000603621 CIAPIN1Q6FI81 312 aa18.19■□□□□ 0.5
TUBE1-204ENST00000603621 YDJCA8MPS7 323 aa18.18■□□□□ 0.5
TUBE1-204ENST00000603621 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
TUBE1-204ENST00000603621 EPHX2P34913 555 aa18.18■□□□□ 0.5
TUBE1-204ENST00000603621 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
TUBE1-204ENST00000603621 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
TUBE1-204ENST00000603621 WTIPA6NIX2 430 aaPredicted RBP18.17■□□□□ 0.5
TUBE1-204ENST00000603621 ECE2O60344 883 aa18.17■□□□□ 0.5
TUBE1-204ENST00000603621 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
TUBE1-204ENST00000603621 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
TUBE1-204ENST00000603621 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
TUBE1-204ENST00000603621 EPS15P42566 896 aa18.16■□□□□ 0.5
TUBE1-204ENST00000603621 SCNN1DP51172 638 aa18.16■□□□□ 0.5
TUBE1-204ENST00000603621 TNIP1Q15025 636 aa18.16■□□□□ 0.5
TUBE1-204ENST00000603621 ZBED9Q6R2W3 1325 aa18.16■□□□□ 0.5
TUBE1-204ENST00000603621 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 BCAR3O75815 825 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 GMPSP49915 693 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-204ENST00000603621 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
TUBE1-204ENST00000603621 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-204ENST00000603621 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-204ENST00000603621 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
TUBE1-204ENST00000603621 KCNQ5Q9NR82 932 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 UTYO14607 1347 aa18.15■□□□□ 0.5
TUBE1-204ENST00000603621 PSMD14O00487 310 aa18.14■□□□□ 0.49
TUBE1-204ENST00000603621 CHRNDQ07001 517 aa18.14■□□□□ 0.49
TUBE1-204ENST00000603621 LDHDQ86WU2 507 aa18.14■□□□□ 0.49
TUBE1-204ENST00000603621 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
TUBE1-204ENST00000603621 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
TUBE1-204ENST00000603621 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
TUBE1-204ENST00000603621 TAF5LO75529 589 aa18.13■□□□□ 0.49
TUBE1-204ENST00000603621 KCNJ4P48050 445 aa18.13■□□□□ 0.49
TUBE1-204ENST00000603621 APLP1P51693 650 aa18.13■□□□□ 0.49
TUBE1-204ENST00000603621 PNMA8AQ86V59 439 aaPredicted RBP18.13■□□□□ 0.49
TUBE1-204ENST00000603621 CNNM1Q9NRU3 951 aa18.13■□□□□ 0.49
TUBE1-204ENST00000603621 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
TUBE1-204ENST00000603621 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 PLIN1O60240 522 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 HTRA3P83110 453 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 LDHAL6AQ6ZMR3 332 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 GPRC5DQ9NZD1 345 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 ZNF804BA4D1E1 1349 aa18.12■□□□□ 0.49
TUBE1-204ENST00000603621 SNAP23O00161 211 aa18.11■□□□□ 0.49
TUBE1-204ENST00000603621 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
TUBE1-204ENST00000603621 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
TUBE1-204ENST00000603621 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
TUBE1-204ENST00000603621 MED23Q9ULK4 1368 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 SHTN1A0MZ66 631 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 KLRK1P26718 216 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
TUBE1-204ENST00000603621 TXNRD3Q86VQ6 643 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 ARHGAP45Q92619 1136 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
TUBE1-204ENST00000603621 ADARB2Q9NS39 739 aaKnown RBP18.1■□□□□ 0.49
TUBE1-204ENST00000603621 CNOT7Q9UIV1 285 aaKnown RBP18.1■□□□□ 0.49
TUBE1-204ENST00000603621 CEP350Q5VT06 3117 aa18.1■□□□□ 0.49
TUBE1-204ENST00000603621 PSME4Q14997 1843 aa18.09■□□□□ 0.49
TUBE1-204ENST00000603621 ADAMTSL1Q8N6G6 1762 aa18.09■□□□□ 0.49
TUBE1-204ENST00000603621 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
TUBE1-204ENST00000603621 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
TUBE1-204ENST00000603621 FBXW7Q969H0 707 aa18.09■□□□□ 0.49
TUBE1-204ENST00000603621 H7C1D1 291 aa18.08■□□□□ 0.48
TUBE1-204ENST00000603621 TRIM27P14373 513 aa18.08■□□□□ 0.48
TUBE1-204ENST00000603621 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.48
TUBE1-204ENST00000603621 MICALL2Q8IY33 904 aa18.08■□□□□ 0.48
TUBE1-204ENST00000603621 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
TUBE1-204ENST00000603621 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
TUBE1-204ENST00000603621 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
TUBE1-204ENST00000603621 CNTROBQ8N137 903 aa18.07■□□□□ 0.48
TUBE1-204ENST00000603621 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms