RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 SEC16BQ96JE7 1060 aa6.24□□□□□ -1.41
AC004542.1-201ENST00000602955 SALL4Q9UJQ4 1053 aa6.24□□□□□ -1.41
AC004542.1-201ENST00000602955 TMA7Q9Y2S6 64 aaKnown RBP6.24□□□□□ -1.41
AC004542.1-201ENST00000602955 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 FIGNL2A6NMB9 653 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 SASH3O75995 380 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 CYP2E1P05181 493 aaPredicted RBP6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 MMRN1Q13201 1228 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 CCINQ13939 588 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 CCDC85BQ15834 202 aaPredicted RBP6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 EFHC2Q5JST6 749 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 KIAA0825Q8IV33 1275 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 SPON2Q9BUD6 331 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 OXCT2Q9BYC2 517 aaPredicted RBP6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 GSX2Q9BZM3 304 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 ADAMTS1Q9UHI8 967 aa6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
AC004542.1-201ENST00000602955 PHF20L1A8MW92 1017 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 MMP20O60882 483 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 AVPP01185 164 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 RLBP1P12271 317 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 HOXD8P13378 290 aaPredicted RBP6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 FCGRTP55899 365 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 LAMC2Q13753 1193 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 CTC1Q2NKJ3 1217 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 FIGNL1Q6PIW4 674 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 RELL1Q8IUW5 271 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 PMFBP1Q8TBY8 1022 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 TMEM74Q96NL1 305 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 TCF12Q99081 682 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 OSBPL2Q9H1P3 480 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 PIF1Q9H611 641 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 KCNQ5Q9NR82 932 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 KANSL3Q9P2N6 904 aa6.22□□□□□ -1.41
AC004542.1-201ENST00000602955 TLDC2A0PJX2 215 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 ATXN7O15265 892 aaPredicted RBP6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 MAP3K6O95382 1288 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 TARSP26639 723 aaKnown RBP6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 SOX18P35713 384 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 SFSWAPQ12872 951 aaKnown RBP6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 TRIM46Q7Z4K8 759 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 CCNJLQ8IV13 435 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 NBPF4Q96M43 638 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 ZSWIM4Q9H7M6 989 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 EFCC1Q9HA90 598 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 LIN7BQ9HAP6 207 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 ZFYVE1Q9HBF4 777 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 ZFATQ9P243 1243 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 PCDHGC4Q9Y5F7 938 aa6.21□□□□□ -1.42
AC004542.1-201ENST00000602955 SENP3-EIF4A1A0A087X0R7 540 aa6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 KIF4AO95239 1232 aa6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 BMP1P13497 986 aa6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 NCLP19338 710 aaKnown RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 EIF4A3P38919 411 aaKnown RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 KRT25Q7Z3Z0 450 aa6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 ZNF296Q8WUU4 475 aaPredicted RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 GAS2L1Q99501 681 aaPredicted RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 TLR7Q9NYK1 1049 aaKnown RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 DNMT3LQ9UJW3 386 aa6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 CDK11AQ9UQ88 783 aaPredicted RBP6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 TBX22Q9Y458 520 aa6.2□□□□□ -1.42
AC004542.1-201ENST00000602955 PSAPP07602 524 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 THBS1P07996 1170 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 RARAP10276 462 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 GBP2P32456 591 aaPredicted RBP6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 SOX9P48436 509 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 TNP2Q05952 138 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 HYAL2Q12891 473 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 UBAP2LQ14157 1087 aaKnown RBP6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 ZNF746Q6NUN9 644 aaPredicted RBP6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 DTHD1Q6ZMT9 781 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 CKAP2LQ8IYA6 745 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 PHC3Q8NDX5 983 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 RHOVQ96L33 236 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 CNTNAP3BQ96NU0 1288 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 ZKSCAN3Q9BRR0 538 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 CNTNAP3Q9BZ76 1288 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 CEP44Q9C0F1 390 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 AKAP2Q9Y2D5 859 aa6.19□□□□□ -1.42
AC004542.1-201ENST00000602955 MINDY4BA8MYZ0 360 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 SSBP05455 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 NFKB1P19838 968 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 GARTP22102 1010 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 ITPKAP23677 461 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 NASPP49321 788 aaPredicted RBP6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 SERINC3Q13530 473 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 COL9A2Q14055 689 aaPredicted RBP6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 COL13A1Q5TAT6 717 aaPredicted RBP6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 NCAPG2Q86XI2 1143 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 CEP120Q8N960 986 aa6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 EAF1Q96JC9 268 aaPredicted RBP6.18□□□□□ -1.42
AC004542.1-201ENST00000602955 ZFP42Q96MM3 310 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms