RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TBC1D9Q6ZT07 1266 aa21.97■■□□□ 1.11
VRK3-225ENST00000601912 TIMM10P62072 90 aa21.96■■□□□ 1.11
VRK3-225ENST00000601912 DDR1Q08345 913 aa21.96■■□□□ 1.11
VRK3-225ENST00000601912 CNTROBQ8N137 903 aa21.96■■□□□ 1.11
VRK3-225ENST00000601912 DBNDD2Q9BQY9 259 aa21.96■■□□□ 1.11
VRK3-225ENST00000601912 ZNF609O15014 1411 aa21.96■■□□□ 1.11
VRK3-225ENST00000601912 RIC1Q4ADV7 1423 aa21.96■■□□□ 1.11
VRK3-225ENST00000601912 LRP5O75197 1615 aa21.95■■□□□ 1.11
VRK3-225ENST00000601912 DDX46Q7L014 1031 aaKnown RBP21.95■■□□□ 1.1
VRK3-225ENST00000601912 PDE8BO95263 885 aa21.95■■□□□ 1.1
VRK3-225ENST00000601912 SEC24BO95487 1268 aa21.94■■□□□ 1.1
VRK3-225ENST00000601912 ATP5JP18859 108 aa21.94■■□□□ 1.1
VRK3-225ENST00000601912 ATP2B3Q16720 1220 aa21.94■■□□□ 1.1
VRK3-225ENST00000601912 BSDC1Q9NW68 430 aaPredicted RBP21.94■■□□□ 1.1
VRK3-225ENST00000601912 GORABQ5T7V8 394 aa21.93■■□□□ 1.1
VRK3-225ENST00000601912 VGLL2Q8N8G2 317 aa21.93■■□□□ 1.1
VRK3-225ENST00000601912 PARP3Q9Y6F1 533 aa21.93■■□□□ 1.1
VRK3-225ENST00000601912 MAP4K4O95819 1239 aaPredicted RBP21.92■■□□□ 1.1
VRK3-225ENST00000601912 RPS8P62241 208 aaKnown RBP21.92■■□□□ 1.1
VRK3-225ENST00000601912 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
VRK3-225ENST00000601912 CCDC158Q5M9N0 1113 aa21.92■■□□□ 1.1
VRK3-225ENST00000601912 BOLA2Q9H3K6 86 aa21.92■■□□□ 1.1
VRK3-225ENST00000601912 MMP10P09238 476 aa21.91■■□□□ 1.1
VRK3-225ENST00000601912 EVI5LQ96CN4 794 aa21.91■■□□□ 1.1
VRK3-225ENST00000601912 MFAP1P55081 439 aaKnown RBP21.91■■□□□ 1.1
VRK3-225ENST00000601912 RPGRQ92834 1020 aaKnown RBP21.91■■□□□ 1.1
VRK3-225ENST00000601912 CELF1Q92879 486 aaKnown RBP21.91■■□□□ 1.1
VRK3-225ENST00000601912 XAGE2Q96GT9 111 aa21.91■■□□□ 1.1
VRK3-225ENST00000601912 CASZ1Q86V15 1759 aa21.9■■□□□ 1.1
VRK3-225ENST00000601912 QSER1Q2KHR3 1735 aa21.9■■□□□ 1.1
VRK3-225ENST00000601912 HELBQ8NG08 1087 aaPredicted RBP21.9■■□□□ 1.1
VRK3-225ENST00000601912 LPIN2Q92539 896 aa21.9■■□□□ 1.1
VRK3-225ENST00000601912 CHRNDQ07001 517 aa21.89■■□□□ 1.1
VRK3-225ENST00000601912 MSL1Q68DK7 614 aa21.89■■□□□ 1.1
VRK3-225ENST00000601912 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
VRK3-225ENST00000601912 SLC5A1P13866 664 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 CRY2Q49AN0 593 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 SPEF2Q9C093 1822 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 GRAPQ13588 217 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 TTC39AQ5SRH9 613 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 GRAPLQ8TC17 118 aaPredicted RBP21.88■■□□□ 1.09
VRK3-225ENST00000601912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.88■■□□□ 1.09
VRK3-225ENST00000601912 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
VRK3-225ENST00000601912 HAUS7Q99871 368 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 BRIP1Q9BX63 1249 aa21.88■■□□□ 1.09
VRK3-225ENST00000601912 TAF5LO75529 589 aa21.87■■□□□ 1.09
VRK3-225ENST00000601912 IFIT1P09914 478 aaKnown RBP21.87■■□□□ 1.09
VRK3-225ENST00000601912 FGFR2P21802 821 aa21.87■■□□□ 1.09
VRK3-225ENST00000601912 CHMLP26374 656 aa21.87■■□□□ 1.09
VRK3-225ENST00000601912 ADORA1P30542 326 aa21.87■■□□□ 1.09
VRK3-225ENST00000601912 MINPP1Q9UNW1 487 aa21.87■■□□□ 1.09
VRK3-225ENST00000601912 ANP32AP39687 249 aaKnown RBP21.86■■□□□ 1.09
VRK3-225ENST00000601912 AK9Q5TCS8 1911 aa21.86■■□□□ 1.09
VRK3-225ENST00000601912 KLRG2A4D1S0 409 aaPredicted RBP21.85■■□□□ 1.09
VRK3-225ENST00000601912 DNAJC2Q99543 621 aaKnown RBP21.85■■□□□ 1.09
VRK3-225ENST00000601912 ANKRD2Q9GZV1 360 aa21.85■■□□□ 1.09
VRK3-225ENST00000601912 NRXN2Q9P2S2 1712 aa21.85■■□□□ 1.09
VRK3-225ENST00000601912 HIP1O00291 1037 aa21.85■■□□□ 1.09
VRK3-225ENST00000601912 PDE6BP35913 854 aa21.85■■□□□ 1.09
VRK3-225ENST00000601912 TAF1P21675 1872 aa21.84■■□□□ 1.09
VRK3-225ENST00000601912 REC8O95072 547 aa21.84■■□□□ 1.09
VRK3-225ENST00000601912 COL4A1P02462 1669 aa21.83■■□□□ 1.09
VRK3-225ENST00000601912 HOXA10P31260 410 aaPredicted RBP21.83■■□□□ 1.09
VRK3-225ENST00000601912 UBE4AQ14139 1066 aa21.83■■□□□ 1.09
VRK3-225ENST00000601912 SLC16A10Q8TF71 515 aa21.83■■□□□ 1.09
VRK3-225ENST00000601912 ZNF512BQ96KM6 892 aaPredicted RBP21.83■■□□□ 1.09
VRK3-225ENST00000601912 FSD1Q9BTV5 496 aa21.83■■□□□ 1.09
VRK3-225ENST00000601912 DIAPH3Q9NSV4 1193 aa21.83■■□□□ 1.09
VRK3-225ENST00000601912 UQCRFS1P1P0C7P4 283 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 RUFY2Q8WXA3 655 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 TBC1D32Q96NH3 1257 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 ESYT1Q9BSJ8 1104 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 C22orf23Q9BZE7 217 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 BBOX1O75936 387 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 PAG1Q9NWQ8 432 aa21.82■■□□□ 1.08
VRK3-225ENST00000601912 KCNJ4P48050 445 aa21.81■■□□□ 1.08
VRK3-225ENST00000601912 CCDC102BQ68D86 513 aa21.81■■□□□ 1.08
VRK3-225ENST00000601912 TICAM2Q86XR7 235 aa21.8■■□□□ 1.08
VRK3-225ENST00000601912 SNAP23O00161 211 aa21.79■■□□□ 1.08
VRK3-225ENST00000601912 GOLIM4O00461 696 aa21.79■■□□□ 1.08
VRK3-225ENST00000601912 FKBP4Q02790 459 aaKnown RBP eCLIP21.79■■□□□ 1.08
VRK3-225ENST00000601912 TMC4Q7Z404 712 aa21.79■■□□□ 1.08
VRK3-225ENST00000601912 EDC3Q96F86 508 aaKnown RBP21.79■■□□□ 1.08
VRK3-225ENST00000601912 NPR1P16066 1061 aa21.79■■□□□ 1.08
VRK3-225ENST00000601912 ARID4AP29374 1257 aaPredicted RBP21.79■■□□□ 1.08
VRK3-225ENST00000601912 CWC27Q6UX04 472 aaKnown RBP21.79■■□□□ 1.08
VRK3-225ENST00000601912 KBTBD3Q8NAB2 608 aa21.79■■□□□ 1.08
VRK3-225ENST00000601912 NDUFB9Q9Y6M9 179 aa21.79■■□□□ 1.08
VRK3-225ENST00000601912 ARAP2Q8WZ64 1704 aa21.78■■□□□ 1.08
VRK3-225ENST00000601912 RFX7Q2KHR2 1363 aa21.78■■□□□ 1.08
VRK3-225ENST00000601912 SRGNP10124 158 aa21.78■■□□□ 1.08
VRK3-225ENST00000601912 PHKA1P46020 1223 aa21.78■■□□□ 1.08
VRK3-225ENST00000601912 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.08
VRK3-225ENST00000601912 PDGFDQ9GZP0 370 aaPredicted RBP21.78■■□□□ 1.08
VRK3-225ENST00000601912 ANKIB1Q9P2G1 1089 aa21.78■■□□□ 1.08
VRK3-225ENST00000601912 ANKRD31Q8N7Z5 1873 aa21.77■■□□□ 1.08
VRK3-225ENST00000601912 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
VRK3-225ENST00000601912 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
VRK3-225ENST00000601912 CAVIN4Q5BKX8 364 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms