RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 SYCE3A1L190 88 aa18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 RPS6KB1P23443 525 aa18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 COL9A3Q14050 684 aaPredicted RBP18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 DDX46Q7L014 1031 aaKnown RBP18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 TEX13AQ9BXU3 409 aaPredicted RBP18.9■□□□□ 0.62
SSR4P1-203ENST00000599569 ZNF609O15014 1411 aa18.89■□□□□ 0.62
SSR4P1-203ENST00000599569 DOT1LQ8TEK3 1739 aa18.89■□□□□ 0.62
SSR4P1-203ENST00000599569 GADD45BO75293 160 aaPredicted RBP18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 TIMM10P62072 90 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 SYAP1Q96A49 352 aaPredicted RBP18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 CIAO1O76071 339 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 KRT32Q14532 448 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 NECAB1Q8N987 351 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 ASAP1Q9ULH1 1129 aa18.89■□□□□ 0.61
SSR4P1-203ENST00000599569 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 ONECUT3O60422 494 aaPredicted RBP18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 CHGBP05060 677 aa18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 TICAM2Q86XR7 235 aa18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 MTMR6Q9Y217 621 aa18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
SSR4P1-203ENST00000599569 DNAJC10Q8IXB1 793 aa18.87■□□□□ 0.61
SSR4P1-203ENST00000599569 TCEANC2Q96MN5 208 aa18.87■□□□□ 0.61
SSR4P1-203ENST00000599569 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
SSR4P1-203ENST00000599569 BCL9O00512 1426 aa18.87■□□□□ 0.61
SSR4P1-203ENST00000599569 PDIA4P13667 645 aaKnown RBP18.86■□□□□ 0.61
SSR4P1-203ENST00000599569 TOB2Q14106 344 aaPredicted RBP18.86■□□□□ 0.61
SSR4P1-203ENST00000599569 CCDC129Q6ZRS4 1044 aa18.86■□□□□ 0.61
SSR4P1-203ENST00000599569 SH3TC1Q8TE82 1336 aa18.86■□□□□ 0.61
SSR4P1-203ENST00000599569 PALLDQ8WX93 1383 aa18.86■□□□□ 0.61
SSR4P1-203ENST00000599569 ZNF330Q9Y3S2 320 aaPredicted RBP18.86■□□□□ 0.61
SSR4P1-203ENST00000599569 A0A1B0GUL7 405 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 ESPNB1AK53 854 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 GOLIM4O00461 696 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 KCNQ2O43526 872 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 STARD3NLO95772 234 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 CLCN1P35523 988 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 NEK1Q96PY6 1258 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 KIF6Q6ZMV9 814 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 HELLSQ9NRZ9 838 aa18.85■□□□□ 0.61
SSR4P1-203ENST00000599569 DTNBO60941 627 aa18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 CYP21A2P08686 494 aa18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 ZNF772Q68DY9 489 aaPredicted RBP18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 CEP126Q9P2H0 1117 aa18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 LARP1BQ659C4 914 aaKnown RBP18.84■□□□□ 0.61
SSR4P1-203ENST00000599569 PHF14O94880 888 aa18.83■□□□□ 0.61
SSR4P1-203ENST00000599569 IFIT1P09914 478 aaKnown RBP18.83■□□□□ 0.61
SSR4P1-203ENST00000599569 UBE2HP62256 183 aa18.83■□□□□ 0.61
SSR4P1-203ENST00000599569 PLA2G12BQ9BX93 195 aa18.83■□□□□ 0.61
SSR4P1-203ENST00000599569 PDCP20941 246 aa18.83■□□□□ 0.6
SSR4P1-203ENST00000599569 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.6
SSR4P1-203ENST00000599569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSR4P1-203ENST00000599569 VPS37CA5D8V6 355 aaPredicted RBP18.82■□□□□ 0.6
SSR4P1-203ENST00000599569 CSPP1Q1MSJ5 1256 aa18.82■□□□□ 0.6
SSR4P1-203ENST00000599569 PTF1AQ7RTS3 328 aa18.82■□□□□ 0.6
SSR4P1-203ENST00000599569 FAM89AQ96GI7 184 aa18.82■□□□□ 0.6
SSR4P1-203ENST00000599569 DNM1Q05193 864 aaKnown RBP18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 ZMYM1Q5SVZ6 1142 aa18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 GIGYF2Q6Y7W6 1299 aaKnown RBP18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 FIBPO43427 364 aa18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 CSF1RP07333 972 aa18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 RGS17Q9UGC6 210 aaPredicted RBP18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
SSR4P1-203ENST00000599569 PDLIM2Q96JY6 352 aa18.8■□□□□ 0.6
SSR4P1-203ENST00000599569 TSPY26PQ9H489 355 aa18.8■□□□□ 0.6
SSR4P1-203ENST00000599569 SLFNL1Q499Z3 407 aa18.8■□□□□ 0.6
SSR4P1-203ENST00000599569 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 STK3Q13188 491 aa18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 CCDC183Q5T5S1 534 aa18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 Q6ZUG5 572 aa18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 RNF113AO15541 343 aaKnown RBP18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 IFIT5Q13325 482 aaKnown RBP18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 SLC4A9Q96Q91 983 aa18.79■□□□□ 0.6
SSR4P1-203ENST00000599569 SPEF2Q9C093 1822 aa18.78■□□□□ 0.6
SSR4P1-203ENST00000599569 HLFQ16534 295 aa18.78■□□□□ 0.6
SSR4P1-203ENST00000599569 TAF7LQ5H9L4 462 aa18.78■□□□□ 0.6
SSR4P1-203ENST00000599569 CDC37L1Q7L3B6 337 aa18.78■□□□□ 0.6
SSR4P1-203ENST00000599569 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
SSR4P1-203ENST00000599569 CCDC85AQ96PX6 553 aaPredicted RBP18.78■□□□□ 0.6
SSR4P1-203ENST00000599569 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
SSR4P1-203ENST00000599569 HSP90AB3PQ58FF7 597 aa18.77■□□□□ 0.6
SSR4P1-203ENST00000599569 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
SSR4P1-203ENST00000599569 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms