RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 CNNM1Q9NRU3 951 aa18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 DUOX1Q9NRD9 1551 aa18.83■□□□□ 0.6
GTF2F1-206ENST00000598607 XDHP47989 1333 aa18.82■□□□□ 0.6
GTF2F1-206ENST00000598607 RTFDC1Q9BY42 306 aaPredicted RBP18.82■□□□□ 0.6
GTF2F1-206ENST00000598607 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
GTF2F1-206ENST00000598607 ANKIB1Q9P2G1 1089 aa18.82■□□□□ 0.6
GTF2F1-206ENST00000598607 MINPP1Q9UNW1 487 aa18.82■□□□□ 0.6
GTF2F1-206ENST00000598607 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
GTF2F1-206ENST00000598607 GPSM2P81274 684 aa18.81■□□□□ 0.6
GTF2F1-206ENST00000598607 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
GTF2F1-206ENST00000598607 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
GTF2F1-206ENST00000598607 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
GTF2F1-206ENST00000598607 RFX5P48382 616 aaPredicted RBP18.8■□□□□ 0.6
GTF2F1-206ENST00000598607 SLC51AQ86UW1 340 aa18.8■□□□□ 0.6
GTF2F1-206ENST00000598607 EYA3Q99504 573 aa18.8■□□□□ 0.6
GTF2F1-206ENST00000598607 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
GTF2F1-206ENST00000598607 GGA1Q9UJY5 639 aa18.8■□□□□ 0.6
GTF2F1-206ENST00000598607 MROH5Q6ZUA9 1318 aa18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 C6orf229H3BNL8 230 aa18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 ATP2B4P23634 1241 aa18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 IARSP41252 1262 aaKnown RBP18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 PTPN12Q05209 780 aaKnown RBP18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 CHRNDQ07001 517 aa18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
GTF2F1-206ENST00000598607 UFL1O94874 794 aa18.78■□□□□ 0.6
GTF2F1-206ENST00000598607 RPAP2Q8IXW5 612 aaPredicted RBP18.78■□□□□ 0.6
GTF2F1-206ENST00000598607 TBC1D16Q8TBP0 767 aa18.78■□□□□ 0.6
GTF2F1-206ENST00000598607 COPRSQ9NQ92 184 aa18.78■□□□□ 0.6
GTF2F1-206ENST00000598607 ZNF277Q9NRM2 450 aaPredicted RBP18.78■□□□□ 0.6
GTF2F1-206ENST00000598607 LEMD3Q9Y2U8 911 aa18.78■□□□□ 0.6
GTF2F1-206ENST00000598607 ZC3H4Q9UPT8 1303 aaKnown RBP18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 PNMA6EA0A0J9YXQ4 647 aa18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 EYA2O00167 538 aa18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 CIAO1O76071 339 aa18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 CEP85Q6P2H3 762 aa18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 PUS3Q9BZE2 481 aaKnown RBP18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
GTF2F1-206ENST00000598607 PSME4Q14997 1843 aa18.77■□□□□ 0.59
GTF2F1-206ENST00000598607 PPIP5K2O43314 1243 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 CENPBP07199 599 aaPredicted RBP18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 KCNJ4P48050 445 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 PRELPP51888 382 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 POLA2Q14181 598 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 LRRC24Q50LG9 513 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 SSH3Q8TE77 659 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 JDP2Q8WYK2 163 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 CRBNQ96SW2 442 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 POLLQ9UGP5 575 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
GTF2F1-206ENST00000598607 HMMRO75330 724 aa18.75■□□□□ 0.59
GTF2F1-206ENST00000598607 KIAA2012Q0VF49 1180 aa18.75■□□□□ 0.59
GTF2F1-206ENST00000598607 AAMPQ13685 434 aa18.75■□□□□ 0.59
GTF2F1-206ENST00000598607 METTL24Q5JXM2 366 aa18.75■□□□□ 0.59
GTF2F1-206ENST00000598607 ZC3H12CQ9C0D7 883 aaKnown RBP18.75■□□□□ 0.59
GTF2F1-206ENST00000598607 SIL1Q9H173 461 aa18.75■□□□□ 0.59
GTF2F1-206ENST00000598607 ZNF804BA4D1E1 1349 aa18.74■□□□□ 0.59
GTF2F1-206ENST00000598607 UTRNP46939 3433 aa18.74■□□□□ 0.59
GTF2F1-206ENST00000598607 MED23Q9ULK4 1368 aa18.74■□□□□ 0.59
GTF2F1-206ENST00000598607 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-206ENST00000598607 AOC3Q16853 763 aa18.74■□□□□ 0.59
GTF2F1-206ENST00000598607 PA2G4Q9UQ80 394 aaKnown RBP18.74■□□□□ 0.59
GTF2F1-206ENST00000598607 TAF5LO75529 589 aa18.73■□□□□ 0.59
GTF2F1-206ENST00000598607 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
GTF2F1-206ENST00000598607 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
GTF2F1-206ENST00000598607 NIM1KQ8IY84 436 aa18.73■□□□□ 0.59
GTF2F1-206ENST00000598607 HELBQ8NG08 1087 aaPredicted RBP18.73■□□□□ 0.59
GTF2F1-206ENST00000598607 ARAP2Q8WZ64 1704 aa18.73■□□□□ 0.59
GTF2F1-206ENST00000598607 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
GTF2F1-206ENST00000598607 PDE8BO95263 885 aa18.72■□□□□ 0.59
GTF2F1-206ENST00000598607 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
GTF2F1-206ENST00000598607 COL4A5P29400 1685 aa18.72■□□□□ 0.59
GTF2F1-206ENST00000598607 G3V3G9 751 aa18.71■□□□□ 0.59
GTF2F1-206ENST00000598607 DCAF8Q5TAQ9 597 aa18.71■□□□□ 0.59
GTF2F1-206ENST00000598607 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
GTF2F1-206ENST00000598607 SCN9AQ15858 1988 aa18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 SURF6O75683 361 aaKnown RBP18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 YY1P25490 414 aa18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 GPR101Q96P66 508 aaPredicted RBP18.7■□□□□ 0.58
GTF2F1-206ENST00000598607 EIF6P56537 245 aaKnown RBP18.69■□□□□ 0.58
GTF2F1-206ENST00000598607 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
GTF2F1-206ENST00000598607 PUM3Q15397 648 aaKnown RBP18.69■□□□□ 0.58
GTF2F1-206ENST00000598607 DPY19L2Q6NUT2 758 aa18.69■□□□□ 0.58
GTF2F1-206ENST00000598607 ZNRF3Q9ULT6 936 aa18.69■□□□□ 0.58
GTF2F1-206ENST00000598607 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
GTF2F1-206ENST00000598607 FZD9O00144 591 aa18.68■□□□□ 0.58
GTF2F1-206ENST00000598607 IFIT1P09914 478 aaKnown RBP18.68■□□□□ 0.58
GTF2F1-206ENST00000598607 SCN4AP35499 1836 aa18.67■□□□□ 0.58
GTF2F1-206ENST00000598607 ECE2O60344 883 aa18.67■□□□□ 0.58
GTF2F1-206ENST00000598607 SLC5A1P13866 664 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms