RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
LIG1-215ENST00000597901 KCNQ5Q9NR82 932 aa19.2■□□□□ 0.66
LIG1-215ENST00000597901 GGA1Q9UJY5 639 aa19.2■□□□□ 0.66
LIG1-215ENST00000597901 COL4A1P02462 1669 aa19.2■□□□□ 0.66
LIG1-215ENST00000597901 UFL1O94874 794 aa19.19■□□□□ 0.66
LIG1-215ENST00000597901 CSF1RP07333 972 aa19.19■□□□□ 0.66
LIG1-215ENST00000597901 BSDC1Q9NW68 430 aaPredicted RBP19.19■□□□□ 0.66
LIG1-215ENST00000597901 CNOT7Q9UIV1 285 aaKnown RBP19.19■□□□□ 0.66
LIG1-215ENST00000597901 MINPP1Q9UNW1 487 aa19.19■□□□□ 0.66
LIG1-215ENST00000597901 E9PSI1 815 aa19.18■□□□□ 0.66
LIG1-215ENST00000597901 CCER2I3L3R5 266 aa19.18■□□□□ 0.66
LIG1-215ENST00000597901 PSMD14O00487 310 aa19.18■□□□□ 0.66
LIG1-215ENST00000597901 ECE2O60344 883 aa19.18■□□□□ 0.66
LIG1-215ENST00000597901 SLFN5Q08AF3 891 aa19.18■□□□□ 0.66
LIG1-215ENST00000597901 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
LIG1-215ENST00000597901 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 G3V3G9 751 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 ATP2B4P23634 1241 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 DPF2Q92785 391 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 DUOX1Q9NRD9 1551 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 XDHP47989 1333 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 RTL9Q8NET4 1388 aa19.17■□□□□ 0.66
LIG1-215ENST00000597901 WTIPA6NIX2 430 aaPredicted RBP19.16■□□□□ 0.66
LIG1-215ENST00000597901 H7C1D1 291 aa19.16■□□□□ 0.66
LIG1-215ENST00000597901 ITGA6P23229 1130 aa19.16■□□□□ 0.66
LIG1-215ENST00000597901 HIRAP54198 1017 aaPredicted RBP19.16■□□□□ 0.66
LIG1-215ENST00000597901 MKRN1Q9UHC7 482 aaKnown RBP19.16■□□□□ 0.66
LIG1-215ENST00000597901 PGAP2Q9UHJ9 254 aa19.16■□□□□ 0.66
LIG1-215ENST00000597901 SHTN1A0MZ66 631 aa19.15■□□□□ 0.66
LIG1-215ENST00000597901 IGHMBP2P38935 993 aaKnown RBP19.15■□□□□ 0.66
LIG1-215ENST00000597901 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
LIG1-215ENST00000597901 VIL1P09327 827 aaKnown RBP19.14■□□□□ 0.65
LIG1-215ENST00000597901 FOXO4P98177 505 aa19.14■□□□□ 0.65
LIG1-215ENST00000597901 FMR1Q06787 632 aaKnown RBP eCLIP19.14■□□□□ 0.657e-8■■□□□ 12.6
LIG1-215ENST00000597901 SLC4A10Q6U841 1118 aa19.14■□□□□ 0.65
LIG1-215ENST00000597901 MRPL50Q8N5N7 158 aaKnown RBP19.14■□□□□ 0.65
LIG1-215ENST00000597901 LTBP1Q14766 1721 aa19.14■□□□□ 0.65
LIG1-215ENST00000597901 ALDH1L1O75891 902 aa19.13■□□□□ 0.65
LIG1-215ENST00000597901 CCT4P50991 539 aaKnown RBP19.13■□□□□ 0.65
LIG1-215ENST00000597901 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
LIG1-215ENST00000597901 MICALL2Q8IY33 904 aa19.13■□□□□ 0.65
LIG1-215ENST00000597901 ZC3H15Q8WU90 426 aaKnown RBP19.13■□□□□ 0.65
LIG1-215ENST00000597901 LRRC37AA6NMS7 1700 aa19.13■□□□□ 0.65
LIG1-215ENST00000597901 ANKRD18BA2A2Z9 1011 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 GRM8O00222 908 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 TRAF5O00463 557 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 RPS12P25398 132 aaKnown RBP19.12■□□□□ 0.65
LIG1-215ENST00000597901 SAMD7Q7Z3H4 446 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
LIG1-215ENST00000597901 TRPM4Q8TD43 1214 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 SRCIN1Q9C0H9 1055 aa19.12■□□□□ 0.65
LIG1-215ENST00000597901 C9orf78Q9NZ63 289 aaPredicted RBP19.12■□□□□ 0.65
LIG1-215ENST00000597901 HSPA1AP0DMV8 641 aaKnown RBP19.11■□□□□ 0.65
LIG1-215ENST00000597901 HSPA1BP0DMV9 641 aaKnown RBP19.11■□□□□ 0.65
LIG1-215ENST00000597901 EPHA10Q5JZY3 1008 aa19.11■□□□□ 0.65
LIG1-215ENST00000597901 PODNQ7Z5L7 613 aa19.11■□□□□ 0.65
LIG1-215ENST00000597901 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
LIG1-215ENST00000597901 ANKRD2Q9GZV1 360 aa19.11■□□□□ 0.65
LIG1-215ENST00000597901 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
LIG1-215ENST00000597901 ADAMTSL1Q8N6G6 1762 aa19.11■□□□□ 0.65
LIG1-215ENST00000597901 IFIT5Q13325 482 aaKnown RBP19.1■□□□□ 0.65
LIG1-215ENST00000597901 DEFB115Q30KQ5 88 aa19.1■□□□□ 0.65
LIG1-215ENST00000597901 RBM26Q5T8P6 1007 aaKnown RBP19.1■□□□□ 0.65
LIG1-215ENST00000597901 CST9Q5W186 159 aa19.1■□□□□ 0.65
LIG1-215ENST00000597901 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
LIG1-215ENST00000597901 CNTNAP1P78357 1384 aa19.09■□□□□ 0.65
LIG1-215ENST00000597901 TBC1D10BQ4KMP7 808 aaPredicted RBP19.09■□□□□ 0.65
LIG1-215ENST00000597901 CDC37L1Q7L3B6 337 aa19.09■□□□□ 0.65
LIG1-215ENST00000597901 GLIS2Q9BZE0 524 aaPredicted RBP19.09■□□□□ 0.65
LIG1-215ENST00000597901 CHMP3Q9Y3E7 222 aa19.09■□□□□ 0.65
LIG1-215ENST00000597901 VEGFBP49765 207 aa19.08■□□□□ 0.64
LIG1-215ENST00000597901 CHRNDQ07001 517 aa19.08■□□□□ 0.64
LIG1-215ENST00000597901 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
LIG1-215ENST00000597901 TXNRD3Q86VQ6 643 aa19.08■□□□□ 0.64
LIG1-215ENST00000597901 ABT1Q9ULW3 272 aaKnown RBP19.08■□□□□ 0.64
LIG1-215ENST00000597901 ZNF804BA4D1E1 1349 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 RASSF10A6NK89 507 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 EGFRP00533 1210 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 USP48Q86UV5 1035 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 AGBL3Q8NEM8 1001 aa19.07■□□□□ 0.64
LIG1-215ENST00000597901 MED23Q9ULK4 1368 aa19.06■□□□□ 0.64
LIG1-215ENST00000597901 PTPRCP08575 1304 aa19.06■□□□□ 0.64
LIG1-215ENST00000597901 NBPF7P0C2Y1 421 aaPredicted RBP19.06■□□□□ 0.64
LIG1-215ENST00000597901 CCDC57Q2TAC2 916 aa19.06■□□□□ 0.64
LIG1-215ENST00000597901 ALDH1L2Q3SY69 923 aa19.06■□□□□ 0.64
LIG1-215ENST00000597901 COL13A1Q5TAT6 717 aaPredicted RBP19.06■□□□□ 0.64
LIG1-215ENST00000597901 GMLQ99445 158 aa19.06■□□□□ 0.64
LIG1-215ENST00000597901 COA1Q9GZY4 146 aa19.06■□□□□ 0.64
LIG1-215ENST00000597901 TAF5LO75529 589 aa19.05■□□□□ 0.64
LIG1-215ENST00000597901 ZNF280AP59817 542 aaPredicted RBP19.05■□□□□ 0.64
LIG1-215ENST00000597901 TNS4Q8IZW8 715 aa19.05■□□□□ 0.64
LIG1-215ENST00000597901 HELBQ8NG08 1087 aaPredicted RBP19.05■□□□□ 0.64
LIG1-215ENST00000597901 AIDAQ96BJ3 306 aa19.05■□□□□ 0.64
LIG1-215ENST00000597901 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
LIG1-215ENST00000597901 SUCLG2Q96I99 432 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms