RNA–Protein interactions for RNA: ENST00000597743.5

CALM3-209, Transcript of calmodulin 3, human

TSL 4 BASIC

Gene CALM3, Length 577 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALM3-209	ENST00000597743	SLC4A10	Q6U841	1118 aa		32.88	■■■□□ 2.85
CALM3-209	ENST00000597743	YTHDC1	Q96MU7	727 aa	Known RBP	32.88	■■■□□ 2.85
CALM3-209	ENST00000597743	PRDM10	Q9NQV6	1147 aa		32.88	■■■□□ 2.85
CALM3-209	ENST00000597743	GMPS	P49915	693 aa	Predicted RBP	32.87	■■■□□ 2.85
CALM3-209	ENST00000597743	KIF16B	Q96L93	1317 aa		32.86	■■■□□ 2.85
CALM3-209	ENST00000597743	CDHR2	Q9BYE9	1310 aa		32.86	■■■□□ 2.85
CALM3-209	ENST00000597743	WDR33	Q9C0J8	1336 aa	Known RBP	32.86	■■■□□ 2.85
CALM3-209	ENST00000597743	WBP1L	Q9NX94	342 aa		32.86	■■■□□ 2.85
CALM3-209	ENST00000597743	BCAR3	O75815	825 aa		32.85	■■■□□ 2.85
CALM3-209	ENST00000597743	HSP90B1	P14625	803 aa	Known RBP	32.85	■■■□□ 2.85
CALM3-209	ENST00000597743	MAP2K1	Q02750	393 aa	Predicted RBP	32.85	■■■□□ 2.85
CALM3-209	ENST00000597743	SF3B3	Q15393	1217 aa	Known RBP	32.85	■■■□□ 2.85
CALM3-209	ENST00000597743	JARID2	Q92833	1246 aa	Predicted RBP	32.85	■■■□□ 2.85
CALM3-209	ENST00000597743	TAF1	P21675	1872 aa		32.84	■■■□□ 2.85
CALM3-209	ENST00000597743		H7C1W4	665 aa		32.84	■■■□□ 2.85
CALM3-209	ENST00000597743	ALDH1L1	O75891	902 aa		32.84	■■■□□ 2.85
CALM3-209	ENST00000597743	RAD17	O75943	681 aa		32.84	■■■□□ 2.85
CALM3-209	ENST00000597743	SRCIN1	Q9C0H9	1055 aa		32.84	■■■□□ 2.85
CALM3-209	ENST00000597743	TRPM7	Q96QT4	1865 aa		32.83	■■■□□ 2.85
CALM3-209	ENST00000597743	ECE1	P42892	770 aa		32.83	■■■□□ 2.85
CALM3-209	ENST00000597743	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.83	■■■□□ 2.85
CALM3-209	ENST00000597743	ARHGAP45	Q92619	1136 aa		32.83	■■■□□ 2.85
CALM3-209	ENST00000597743	API5	Q9BZZ5	524 aa	Known RBP	32.83	■■■□□ 2.85
CALM3-209	ENST00000597743	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.82	■■■□□ 2.84
CALM3-209	ENST00000597743	TRAF5	O00463	557 aa		32.81	■■■□□ 2.84
CALM3-209	ENST00000597743	WASHC4	Q2M389	1173 aa		32.81	■■■□□ 2.84
CALM3-209	ENST00000597743	UBE3B	Q7Z3V4	1068 aa		32.81	■■■□□ 2.84
CALM3-209	ENST00000597743	DDX60	Q8IY21	1712 aa	Known RBP	32.81	■■■□□ 2.84
CALM3-209	ENST00000597743	FMR1	Q06787	632 aa	Known RBP eCLIP	32.8	■■■□□ 2.84
CALM3-209	ENST00000597743		H7C1D1	291 aa		32.79	■■■□□ 2.84
CALM3-209	ENST00000597743	IPO8	O15397	1037 aa	Known RBP	32.79	■■■□□ 2.84
CALM3-209	ENST00000597743	PDE8A	O60658	829 aa		32.79	■■■□□ 2.84
CALM3-209	ENST00000597743	ZC3H15	Q8WU90	426 aa	Known RBP	32.79	■■■□□ 2.84
CALM3-209	ENST00000597743	CELF1	Q92879	486 aa	Known RBP	32.79	■■■□□ 2.84
CALM3-209	ENST00000597743	C6orf229	H3BNL8	230 aa		32.78	■■■□□ 2.84
CALM3-209	ENST00000597743	CASP7	P55210	303 aa		32.78	■■■□□ 2.84
CALM3-209	ENST00000597743	CST9	Q5W186	159 aa		32.78	■■■□□ 2.84
CALM3-209	ENST00000597743	CAPNS2	Q96L46	248 aa		32.78	■■■□□ 2.84
CALM3-209	ENST00000597743	CNOT7	Q9UIV1	285 aa	Known RBP	32.78	■■■□□ 2.84
CALM3-209	ENST00000597743	LRRC37A	A6NMS7	1700 aa		32.77	■■■□□ 2.84
CALM3-209	ENST00000597743	EYA3	Q99504	573 aa		32.77	■■■□□ 2.84
CALM3-209	ENST00000597743	YDJC	A8MPS7	323 aa		32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	GRM8	O00222	908 aa		32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	LBX1	P52954	281 aa		32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	RPS8	P62241	208 aa	Known RBP	32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	FRAT1	Q92837	279 aa	Predicted RBP	32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	BEGAIN	Q9BUH8	593 aa		32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	PGAP2	Q9UHJ9	254 aa		32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	TLL2	Q9Y6L7	1015 aa		32.76	■■■□□ 2.83
CALM3-209	ENST00000597743	GRM1	Q13255	1194 aa		32.75	■■■□□ 2.83
CALM3-209	ENST00000597743	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.75	■■■□□ 2.83
CALM3-209	ENST00000597743	CELF2	O95319	508 aa	Known RBP	32.74	■■■□□ 2.83
CALM3-209	ENST00000597743	ATF7IP	Q6VMQ6	1270 aa		32.74	■■■□□ 2.83
CALM3-209	ENST00000597743	GPR101	Q96P66	508 aa	Predicted RBP	32.74	■■■□□ 2.83
CALM3-209	ENST00000597743	PLA2G12B	Q9BX93	195 aa		32.74	■■■□□ 2.83
CALM3-209	ENST00000597743	DUOX1	Q9NRD9	1551 aa		32.74	■■■□□ 2.83
CALM3-209	ENST00000597743	RIMBP2	O15034	1052 aa		32.73	■■■□□ 2.83
CALM3-209	ENST00000597743	CCT4	P50991	539 aa	Known RBP	32.73	■■■□□ 2.83
CALM3-209	ENST00000597743	CDC37L1	Q7L3B6	337 aa		32.73	■■■□□ 2.83
CALM3-209	ENST00000597743	DPF2	Q92785	391 aa		32.73	■■■□□ 2.83
CALM3-209	ENST00000597743	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.73	■■■□□ 2.83
CALM3-209	ENST00000597743	TRIM27	P14373	513 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	CTSW	P56202	376 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	GPSM2	P81274	684 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	CCDC152	Q4G0S7	254 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	CYP4F22	Q6NT55	531 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	MICALL2	Q8IY33	904 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	DBNDD1	Q9H9R9	158 aa		32.72	■■■□□ 2.83
CALM3-209	ENST00000597743	ZKSCAN2	Q63HK3	967 aa		32.71	■■■□□ 2.83
CALM3-209	ENST00000597743	POLL	Q9UGP5	575 aa		32.71	■■■□□ 2.83
CALM3-209	ENST00000597743	HSPA8	P11142	646 aa	Known RBP	32.7	■■■□□ 2.83
CALM3-209	ENST00000597743	HIRA	P54198	1017 aa	Predicted RBP	32.7	■■■□□ 2.83
CALM3-209	ENST00000597743	TTLL11	Q8NHH1	800 aa		32.7	■■■□□ 2.83
CALM3-209	ENST00000597743	TRPM4	Q8TD43	1214 aa		32.7	■■■□□ 2.83
CALM3-209	ENST00000597743	RCAN3	Q9UKA8	241 aa		32.7	■■■□□ 2.83
CALM3-209	ENST00000597743	UTY	O14607	1347 aa		32.7	■■■□□ 2.82
CALM3-209	ENST00000597743	PSMD14	O00487	310 aa		32.69	■■■□□ 2.82
CALM3-209	ENST00000597743	SAPCD2	Q86UD0	394 aa		32.69	■■■□□ 2.82
CALM3-209	ENST00000597743	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.69	■■■□□ 2.82
CALM3-209	ENST00000597743		G3V3G9	751 aa		32.68	■■■□□ 2.82
CALM3-209	ENST00000597743	RPS12	P25398	132 aa	Known RBP	32.68	■■■□□ 2.82
CALM3-209	ENST00000597743	MAP2K2	P36507	400 aa		32.68	■■■□□ 2.82
CALM3-209	ENST00000597743	DCAF8	Q5TAQ9	597 aa		32.68	■■■□□ 2.82
CALM3-209	ENST00000597743	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.68	■■■□□ 2.82
CALM3-209	ENST00000597743	ZNF408	Q9H9D4	720 aa		32.68	■■■□□ 2.82
CALM3-209	ENST00000597743	ECE2	O60344	883 aa		32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	INTS3	Q68E01	1043 aa	Known RBP	32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	TBC1D16	Q8TBP0	767 aa		32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	HHIPL1	Q96JK4	782 aa		32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	USP44	Q9H0E7	712 aa		32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	ANKIB1	Q9P2G1	1089 aa		32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	TNN	Q9UQP3	1299 aa		32.67	■■■□□ 2.82
CALM3-209	ENST00000597743	DOK7	Q18PE1	504 aa		32.66	■■■□□ 2.82
CALM3-209	ENST00000597743	SHTN1	A0MZ66	631 aa		32.65	■■■□□ 2.82
CALM3-209	ENST00000597743	CSF1R	P07333	972 aa		32.65	■■■□□ 2.82
CALM3-209	ENST00000597743	FOXO4	P98177	505 aa		32.65	■■■□□ 2.82
CALM3-209	ENST00000597743	SEC31B	Q9NQW1	1179 aa		32.65	■■■□□ 2.82
CALM3-209	ENST00000597743	PODXL2	Q9NZ53	605 aa		32.65	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms