RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 LMOD1P29536 600 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-209ENST00000596482 MPHOSPH8Q99549 860 aa24.23■■□□□ 1.47
HOMER3-209ENST00000596482 KIF16BQ96L93 1317 aa24.22■■□□□ 1.47
HOMER3-209ENST00000596482 RIMBP2O15034 1052 aa24.22■■□□□ 1.47
HOMER3-209ENST00000596482 TAF1DQ9H5J8 278 aaPredicted RBP24.22■■□□□ 1.47
HOMER3-209ENST00000596482 FOXO4P98177 505 aa24.21■■□□□ 1.47
HOMER3-209ENST00000596482 IFIT5Q13325 482 aaKnown RBP24.21■■□□□ 1.47
HOMER3-209ENST00000596482 CIAPIN1Q6FI81 312 aa24.21■■□□□ 1.47
HOMER3-209ENST00000596482 ZC3H12CQ9C0D7 883 aaKnown RBP24.21■■□□□ 1.47
HOMER3-209ENST00000596482 ZBED9Q6R2W3 1325 aa24.2■■□□□ 1.46
HOMER3-209ENST00000596482 ATP2B4P23634 1241 aa24.2■■□□□ 1.46
HOMER3-209ENST00000596482 EPHX2P34913 555 aa24.2■■□□□ 1.46
HOMER3-209ENST00000596482 RARSP54136 660 aaKnown RBP24.2■■□□□ 1.46
HOMER3-209ENST00000596482 CXCL9Q07325 125 aa24.2■■□□□ 1.46
HOMER3-209ENST00000596482 GPR101Q96P66 508 aaPredicted RBP24.2■■□□□ 1.46
HOMER3-209ENST00000596482 API5Q9BZZ5 524 aaKnown RBP24.2■■□□□ 1.46
HOMER3-209ENST00000596482 DBNDD1Q9H9R9 158 aa24.2■■□□□ 1.46
HOMER3-209ENST00000596482 G3V3G9 751 aa24.19■■□□□ 1.46
HOMER3-209ENST00000596482 BRPF1P55201 1214 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-209ENST00000596482 TNIP1Q15025 636 aa24.19■■□□□ 1.46
HOMER3-209ENST00000596482 EAPPQ56P03 285 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-209ENST00000596482 TAF7LQ5H9L4 462 aa24.19■■□□□ 1.46
HOMER3-209ENST00000596482 DCAF8Q5TAQ9 597 aa24.19■■□□□ 1.46
HOMER3-209ENST00000596482 LMBR1LQ6UX01 489 aa24.19■■□□□ 1.46
HOMER3-209ENST00000596482 NOB1Q9ULX3 412 aaKnown RBP24.19■■□□□ 1.46
HOMER3-209ENST00000596482 MINPP1Q9UNW1 487 aa24.19■■□□□ 1.46
HOMER3-209ENST00000596482 UTYO14607 1347 aa24.18■■□□□ 1.46
HOMER3-209ENST00000596482 ECE2O60344 883 aa24.18■■□□□ 1.46
HOMER3-209ENST00000596482 RAD17O75943 681 aa24.18■■□□□ 1.46
HOMER3-209ENST00000596482 CCDC57Q2TAC2 916 aa24.18■■□□□ 1.46
HOMER3-209ENST00000596482 LDHDQ86WU2 507 aa24.18■■□□□ 1.46
HOMER3-209ENST00000596482 SUCLG2Q96I99 432 aa24.18■■□□□ 1.46
HOMER3-209ENST00000596482 YDJCA8MPS7 323 aa24.17■■□□□ 1.46
HOMER3-209ENST00000596482 NBPF7P0C2Y1 421 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-209ENST00000596482 CCT4P50991 539 aaKnown RBP24.17■■□□□ 1.46
HOMER3-209ENST00000596482 SCNN1DP51172 638 aa24.17■■□□□ 1.46
HOMER3-209ENST00000596482 APLP1P51693 650 aa24.17■■□□□ 1.46
HOMER3-209ENST00000596482 EPHA10Q5JZY3 1008 aa24.17■■□□□ 1.46
HOMER3-209ENST00000596482 CHADLQ6NUI6 762 aa24.17■■□□□ 1.46
HOMER3-209ENST00000596482 PNMA8AQ86V59 439 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-209ENST00000596482 ANKRD2Q9GZV1 360 aa24.17■■□□□ 1.46
HOMER3-209ENST00000596482 DOK7Q18PE1 504 aa24.16■■□□□ 1.46
HOMER3-209ENST00000596482 MED23Q9ULK4 1368 aa24.16■■□□□ 1.46
HOMER3-209ENST00000596482 POTEIP0CG38 1075 aa24.15■■□□□ 1.46
HOMER3-209ENST00000596482 POTEJP0CG39 1038 aa24.15■■□□□ 1.46
HOMER3-209ENST00000596482 GMPSP49915 693 aaPredicted RBP24.14■■□□□ 1.45
HOMER3-209ENST00000596482 CLEC11AQ9Y240 323 aa24.14■■□□□ 1.45
HOMER3-209ENST00000596482 ADAMTSL1Q8N6G6 1762 aa24.14■■□□□ 1.45
HOMER3-209ENST00000596482 KCNJ4P48050 445 aa24.13■■□□□ 1.45
HOMER3-209ENST00000596482 BICC1Q9H694 974 aaKnown RBP24.13■■□□□ 1.45
HOMER3-209ENST00000596482 GPRC5DQ9NZD1 345 aa24.13■■□□□ 1.45
HOMER3-209ENST00000596482 LEMD3Q9Y2U8 911 aa24.13■■□□□ 1.45
HOMER3-209ENST00000596482 EPS15P42566 896 aa24.12■■□□□ 1.45
HOMER3-209ENST00000596482 CHRNDQ07001 517 aa24.12■■□□□ 1.45
HOMER3-209ENST00000596482 PSMD14O00487 310 aa24.11■■□□□ 1.45
HOMER3-209ENST00000596482 IPO8O15397 1037 aaKnown RBP24.11■■□□□ 1.45
HOMER3-209ENST00000596482 ARHGAP45Q92619 1136 aa24.11■■□□□ 1.45
HOMER3-209ENST00000596482 KAZALD1Q96I82 304 aa24.11■■□□□ 1.45
HOMER3-209ENST00000596482 USP44Q9H0E7 712 aa24.11■■□□□ 1.45
HOMER3-209ENST00000596482 CNNM1Q9NRU3 951 aa24.11■■□□□ 1.45
HOMER3-209ENST00000596482 ADARB2Q9NS39 739 aaKnown RBP24.11■■□□□ 1.45
HOMER3-209ENST00000596482 ZNF804BA4D1E1 1349 aa24.1■■□□□ 1.45
HOMER3-209ENST00000596482 RABL6Q3YEC7 729 aaPredicted RBP24.1■■□□□ 1.45
HOMER3-209ENST00000596482 LDHAL6AQ6ZMR3 332 aa24.1■■□□□ 1.45
HOMER3-209ENST00000596482 USP50Q70EL3 339 aaPredicted RBP24.1■■□□□ 1.45
HOMER3-209ENST00000596482 A0A1B0GUL6 1792 aa24.1■■□□□ 1.45
HOMER3-209ENST00000596482 UBTFL1P0CB47 393 aaPredicted RBP24.09■■□□□ 1.45
HOMER3-209ENST00000596482 FRAT1Q92837 279 aaPredicted RBP24.09■■□□□ 1.45
HOMER3-209ENST00000596482 ZNF594Q96JF6 807 aaPredicted RBP24.09■■□□□ 1.45
HOMER3-209ENST00000596482 RPS12P25398 132 aaKnown RBP24.08■■□□□ 1.45
HOMER3-209ENST00000596482 ANKRD44Q8N8A2 993 aa24.08■■□□□ 1.45
HOMER3-209ENST00000596482 BCAR3O75815 825 aa24.07■■□□□ 1.44
HOMER3-209ENST00000596482 PODNQ7Z5L7 613 aa24.07■■□□□ 1.44
HOMER3-209ENST00000596482 HDAC5Q9UQL6 1122 aa24.07■■□□□ 1.44
HOMER3-209ENST00000596482 ZBTB12Q9Y330 459 aaPredicted RBP24.07■■□□□ 1.44
HOMER3-209ENST00000596482 SCN9AQ15858 1988 aa24.06■■□□□ 1.44
HOMER3-209ENST00000596482 MICALL2Q8IY33 904 aa24.06■■□□□ 1.44
HOMER3-209ENST00000596482 DPF2Q92785 391 aa24.06■■□□□ 1.44
HOMER3-209ENST00000596482 COA1Q9GZY4 146 aa24.06■■□□□ 1.44
HOMER3-209ENST00000596482 KCNQ5Q9NR82 932 aa24.06■■□□□ 1.44
HOMER3-209ENST00000596482 WTIPA6NIX2 430 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-209ENST00000596482 H7C1D1 291 aa24.05■■□□□ 1.44
HOMER3-209ENST00000596482 TAF5LO75529 589 aa24.05■■□□□ 1.44
HOMER3-209ENST00000596482 TRIM27P14373 513 aa24.05■■□□□ 1.44
HOMER3-209ENST00000596482 MAP1SQ66K74 1059 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-209ENST00000596482 ATF7IPQ6VMQ6 1270 aa24.05■■□□□ 1.44
HOMER3-209ENST00000596482 HELBQ8NG08 1087 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-209ENST00000596482 CNOT7Q9UIV1 285 aaKnown RBP24.05■■□□□ 1.44
HOMER3-209ENST00000596482 PSME4Q14997 1843 aa24.05■■□□□ 1.44
HOMER3-209ENST00000596482 ZNF609O15014 1411 aa24.04■■□□□ 1.44
HOMER3-209ENST00000596482 VIL1P09327 827 aaKnown RBP24.04■■□□□ 1.44
HOMER3-209ENST00000596482 USP17L3A6NCW0 530 aa24.03■■□□□ 1.44
HOMER3-209ENST00000596482 USP17L4A6NCW7 530 aa24.03■■□□□ 1.44
HOMER3-209ENST00000596482 PLIN1O60240 522 aa24.03■■□□□ 1.44
HOMER3-209ENST00000596482 KLRK1P26718 216 aa24.03■■□□□ 1.44
HOMER3-209ENST00000596482 INTS3Q68E01 1043 aaKnown RBP24.03■■□□□ 1.44
HOMER3-209ENST00000596482 USP17L1Q7RTZ2 530 aa24.03■■□□□ 1.44
HOMER3-209ENST00000596482 FBXW7Q969H0 707 aa24.03■■□□□ 1.44
HOMER3-209ENST00000596482 ZKSCAN2Q63HK3 967 aa24.02■■□□□ 1.44
HOMER3-209ENST00000596482 RSBN1LQ6PCB5 846 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms