RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 A0A1B0GUL6 1792 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 GRM8O00222 908 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 ITGA6P23229 1130 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 LDHDQ86WU2 507 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 EYA3Q99504 573 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 DBNDD1Q9H9R9 158 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 PTPRCP08575 1304 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 PSME4Q14997 1843 aa28.32■■■□□ 2.12
GTF2F1-204ENST00000594965 RAD17O75943 681 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 UFL1O94874 794 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 EPS15P42566 896 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 HTRA3P83110 453 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 EPHA10Q5JZY3 1008 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 CIAPIN1Q6FI81 312 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 GGA1Q9UJY5 639 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 MINPP1Q9UNW1 487 aa28.31■■■□□ 2.12
GTF2F1-204ENST00000594965 XDHP47989 1333 aa28.3■■■□□ 2.12
GTF2F1-204ENST00000594965 EAPPQ56P03 285 aaPredicted RBP28.3■■■□□ 2.12
GTF2F1-204ENST00000594965 WTIPA6NIX2 430 aaPredicted RBP28.29■■■□□ 2.12
GTF2F1-204ENST00000594965 CT47B1P0C2W7 299 aaPredicted RBP28.29■■■□□ 2.12
GTF2F1-204ENST00000594965 DOK7Q18PE1 504 aa28.29■■■□□ 2.12
GTF2F1-204ENST00000594965 LMOD1P29536 600 aaPredicted RBP28.28■■■□□ 2.12
GTF2F1-204ENST00000594965 PNMA8AQ86V59 439 aaPredicted RBP28.28■■■□□ 2.12
GTF2F1-204ENST00000594965 C9orf78Q9NZ63 289 aaPredicted RBP28.28■■■□□ 2.12
GTF2F1-204ENST00000594965 ECE2O60344 883 aa28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 IGHMBP2P38935 993 aaKnown RBP28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 GMPSP49915 693 aaPredicted RBP28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 DNAJC5GQ8N7S2 189 aa28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 ZC3H12CQ9C0D7 883 aaKnown RBP28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 KCNQ5Q9NR82 932 aa28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 SMC4Q9NTJ3 1288 aa28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 GPRC5DQ9NZD1 345 aa28.27■■■□□ 2.12
GTF2F1-204ENST00000594965 CEP350Q5VT06 3117 aa28.26■■■□□ 2.11
GTF2F1-204ENST00000594965 UTYO14607 1347 aa28.26■■■□□ 2.11
GTF2F1-204ENST00000594965 ATP2B4P23634 1241 aa28.26■■■□□ 2.11
GTF2F1-204ENST00000594965 TNIP1Q15025 636 aa28.26■■■□□ 2.11
GTF2F1-204ENST00000594965 KAZALD1Q96I82 304 aa28.26■■■□□ 2.11
GTF2F1-204ENST00000594965 NBPF7P0C2Y1 421 aaPredicted RBP28.25■■■□□ 2.11
GTF2F1-204ENST00000594965 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
GTF2F1-204ENST00000594965 CLEC11AQ9Y240 323 aa28.25■■■□□ 2.11
GTF2F1-204ENST00000594965 ZNF646O15015 1829 aaPredicted RBP28.25■■■□□ 2.11
GTF2F1-204ENST00000594965 ANKRD18BA2A2Z9 1011 aa28.24■■■□□ 2.11
GTF2F1-204ENST00000594965 PSMD14O00487 310 aa28.24■■■□□ 2.11
GTF2F1-204ENST00000594965 ITGBL1O95965 494 aaPredicted RBP28.24■■■□□ 2.11
GTF2F1-204ENST00000594965 SUCLG2Q96I99 432 aa28.24■■■□□ 2.11
GTF2F1-204ENST00000594965 PASKQ96RG2 1323 aa28.23■■■□□ 2.11
GTF2F1-204ENST00000594965 CCT4P50991 539 aaKnown RBP28.23■■■□□ 2.11
GTF2F1-204ENST00000594965 BRPF1P55201 1214 aaPredicted RBP28.23■■■□□ 2.11
GTF2F1-204ENST00000594965 MPHOSPH8Q99549 860 aa28.23■■■□□ 2.11
GTF2F1-204ENST00000594965 IFIT5Q13325 482 aaKnown RBP28.22■■■□□ 2.11
GTF2F1-204ENST00000594965 USP50Q70EL3 339 aaPredicted RBP28.22■■■□□ 2.11
GTF2F1-204ENST00000594965 ZBTB12Q9Y330 459 aaPredicted RBP28.22■■■□□ 2.11
GTF2F1-204ENST00000594965 CHMP3Q9Y3E7 222 aa28.22■■■□□ 2.11
GTF2F1-204ENST00000594965 SHTN1A0MZ66 631 aa28.21■■■□□ 2.11
GTF2F1-204ENST00000594965 HNRNPUQ00839 825 aaKnown RBP eCLIP28.21■■■□□ 2.11
GTF2F1-204ENST00000594965 MAP1SQ66K74 1059 aaPredicted RBP28.21■■■□□ 2.11
GTF2F1-204ENST00000594965 ADARB2Q9NS39 739 aaKnown RBP28.21■■■□□ 2.11
GTF2F1-204ENST00000594965 MED23Q9ULK4 1368 aa28.21■■■□□ 2.11
GTF2F1-204ENST00000594965 RARSP54136 660 aaKnown RBP28.2■■■□□ 2.1
GTF2F1-204ENST00000594965 NOB1Q9ULX3 412 aaKnown RBP28.2■■■□□ 2.1
GTF2F1-204ENST00000594965 CHRNDQ07001 517 aa28.19■■■□□ 2.1
GTF2F1-204ENST00000594965 ZNF594Q96JF6 807 aaPredicted RBP28.19■■■□□ 2.1
GTF2F1-204ENST00000594965 CNOT7Q9UIV1 285 aaKnown RBP28.19■■■□□ 2.1
GTF2F1-204ENST00000594965 LEMD3Q9Y2U8 911 aa28.19■■■□□ 2.1
GTF2F1-204ENST00000594965 TXNRD3Q86VQ6 643 aa28.18■■■□□ 2.1
GTF2F1-204ENST00000594965 CNTROBQ8N137 903 aa28.18■■■□□ 2.1
GTF2F1-204ENST00000594965 ANKRD2Q9GZV1 360 aa28.18■■■□□ 2.1
GTF2F1-204ENST00000594965 USP44Q9H0E7 712 aa28.18■■■□□ 2.1
GTF2F1-204ENST00000594965 VIL1P09327 827 aaKnown RBP28.17■■■□□ 2.1
GTF2F1-204ENST00000594965 DPF2Q92785 391 aa28.17■■■□□ 2.1
GTF2F1-204ENST00000594965 ZNF804BA4D1E1 1349 aa28.17■■■□□ 2.1
GTF2F1-204ENST00000594965 G3V3G9 751 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 KLRK1P26718 216 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 HIRAP54198 1017 aaPredicted RBP28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 CCDC57Q2TAC2 916 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 RABL6Q3YEC7 729 aaPredicted RBP28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 DCAF8Q5TAQ9 597 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 MICALL2Q8IY33 904 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 ANKRD44Q8N8A2 993 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 BICC1Q9H694 974 aaKnown RBP28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 TRPM7Q96QT4 1865 aa28.16■■■□□ 2.1
GTF2F1-204ENST00000594965 TRPM4Q8TD43 1214 aa28.15■■■□□ 2.1
GTF2F1-204ENST00000594965 KLRG1Q96E93 195 aa28.15■■■□□ 2.1
GTF2F1-204ENST00000594965 POLR2AP24928 1970 aaKnown RBP28.15■■■□□ 2.1
GTF2F1-204ENST00000594965 TAF5LO75529 589 aa28.14■■■□□ 2.1
GTF2F1-204ENST00000594965 PODNQ7Z5L7 613 aa28.14■■■□□ 2.1
GTF2F1-204ENST00000594965 IRS2Q9Y4H2 1338 aa28.14■■■□□ 2.09
GTF2F1-204ENST00000594965 ZNF609O15014 1411 aa28.13■■■□□ 2.09
GTF2F1-204ENST00000594965 SNAP23O00161 211 aa28.13■■■□□ 2.09
GTF2F1-204ENST00000594965 RPS12P25398 132 aaKnown RBP28.13■■■□□ 2.09
GTF2F1-204ENST00000594965 HELBQ8NG08 1087 aaPredicted RBP28.13■■■□□ 2.09
GTF2F1-204ENST00000594965 CREBZFQ9NS37 354 aa28.13■■■□□ 2.09
GTF2F1-204ENST00000594965 API5Q9BZZ5 524 aaKnown RBP28.12■■■□□ 2.09
GTF2F1-204ENST00000594965 PGAP2Q9UHJ9 254 aa28.12■■■□□ 2.09
GTF2F1-204ENST00000594965 H7C1D1 291 aa28.11■■■□□ 2.09
GTF2F1-204ENST00000594965 TAF7LQ5H9L4 462 aa28.11■■■□□ 2.09
GTF2F1-204ENST00000594965 LDHAL6AQ6ZMR3 332 aa28.11■■■□□ 2.09
GTF2F1-204ENST00000594965 SAMD7Q7Z3H4 446 aa28.11■■■□□ 2.09
GTF2F1-204ENST00000594965 EGFRP00533 1210 aa28.1■■■□□ 2.09
GTF2F1-204ENST00000594965 FMR1Q06787 632 aaKnown RBP eCLIP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms