RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CCDC152Q4G0S7 254 aa28.05■■■□□ 2.08
DDX39A-215ENST00000590696 TSR2Q969E8 191 aaKnown RBP28.05■■■□□ 2.08
DDX39A-215ENST00000590696 KCNQ5Q9NR82 932 aa28.05■■■□□ 2.08
DDX39A-215ENST00000590696 PODXL2Q9NZ53 605 aa28.04■■■□□ 2.08
DDX39A-215ENST00000590696 MAP3K2Q9Y2U5 619 aa28.04■■■□□ 2.08
DDX39A-215ENST00000590696 CDC37L1Q7L3B6 337 aa28.03■■■□□ 2.08
DDX39A-215ENST00000590696 CCDC85AQ96PX6 553 aaPredicted RBP28.03■■■□□ 2.08
DDX39A-215ENST00000590696 ZC3H12CQ9C0D7 883 aaKnown RBP28.03■■■□□ 2.08
DDX39A-215ENST00000590696 HSPA8P11142 646 aaKnown RBP28.02■■■□□ 2.08
DDX39A-215ENST00000590696 SAMD7Q7Z3H4 446 aa28.02■■■□□ 2.08
DDX39A-215ENST00000590696 ANKIB1Q9P2G1 1089 aa28.02■■■□□ 2.08
DDX39A-215ENST00000590696 KSR2Q6VAB6 950 aa28.01■■■□□ 2.07
DDX39A-215ENST00000590696 SAPCD2Q86UD0 394 aa28.01■■■□□ 2.07
DDX39A-215ENST00000590696 ZNF408Q9H9D4 720 aa28.01■■■□□ 2.07
DDX39A-215ENST00000590696 RTL9Q8NET4 1388 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 THSD7BQ9C0I4 1608 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 PI4KAP2A4QPH2 592 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 UFL1O94874 794 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 RPS12P25398 132 aaKnown RBP28■■■□□ 2.07
DDX39A-215ENST00000590696 CCDC27Q2M243 656 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 TBC1D10BQ4KMP7 808 aaPredicted RBP28■■■□□ 2.07
DDX39A-215ENST00000590696 WWC1Q8IX03 1113 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 PI4KAP1Q8N8J0 262 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 STK31Q9BXU1 1019 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 GGA1Q9UJY5 639 aa28■■■□□ 2.07
DDX39A-215ENST00000590696 G3V3G9 751 aa27.99■■■□□ 2.07
DDX39A-215ENST00000590696 DCAF8Q5TAQ9 597 aa27.99■■■□□ 2.07
DDX39A-215ENST00000590696 USP48Q86UV5 1035 aa27.99■■■□□ 2.07
DDX39A-215ENST00000590696 AOC2O75106 756 aa27.98■■■□□ 2.07
DDX39A-215ENST00000590696 IGKV5-2P06315 115 aa27.98■■■□□ 2.07
DDX39A-215ENST00000590696 ANKRD18AQ8IVF6 992 aa27.98■■■□□ 2.07
DDX39A-215ENST00000590696 EGFRP00533 1210 aa27.97■■■□□ 2.07
DDX39A-215ENST00000590696 TWISTNBQ3B726 338 aaPredicted RBP27.97■■■□□ 2.07
DDX39A-215ENST00000590696 RBM26Q5T8P6 1007 aaKnown RBP27.97■■■□□ 2.07
DDX39A-215ENST00000590696 BEGAINQ9BUH8 593 aa27.97■■■□□ 2.07
DDX39A-215ENST00000590696 VIL1P09327 827 aaKnown RBP27.96■■■□□ 2.07
DDX39A-215ENST00000590696 MAP2K2P36507 400 aa27.96■■■□□ 2.07
DDX39A-215ENST00000590696 NEXNQ0ZGT2 675 aa27.96■■■□□ 2.07
DDX39A-215ENST00000590696 HHIPL1Q96JK4 782 aa27.96■■■□□ 2.07
DDX39A-215ENST00000590696 CTSWP56202 376 aa27.95■■■□□ 2.06
DDX39A-215ENST00000590696 DLK2Q6UY11 383 aa27.95■■■□□ 2.06
DDX39A-215ENST00000590696 SCN9AQ15858 1988 aa27.94■■■□□ 2.06
DDX39A-215ENST00000590696 CWF19L2Q2TBE0 894 aaKnown RBP27.94■■■□□ 2.06
DDX39A-215ENST00000590696 G2E3Q7L622 706 aa27.94■■■□□ 2.06
DDX39A-215ENST00000590696 XDHP47989 1333 aa27.93■■■□□ 2.06
DDX39A-215ENST00000590696 SLC4A2P04920 1241 aa27.93■■■□□ 2.06
DDX39A-215ENST00000590696 KRT26Q7Z3Y9 468 aa27.93■■■□□ 2.06
DDX39A-215ENST00000590696 TTLL11Q8NHH1 800 aa27.93■■■□□ 2.06
DDX39A-215ENST00000590696 CDC5LQ99459 802 aaKnown RBP27.93■■■□□ 2.06
DDX39A-215ENST00000590696 DCPSQ96C86 337 aaKnown RBP27.92■■■□□ 2.06
DDX39A-215ENST00000590696 IL16Q14005 1332 aa27.92■■■□□ 2.06
DDX39A-215ENST00000590696 NEURL1BA8MQ27 555 aa27.91■■■□□ 2.06
DDX39A-215ENST00000590696 ATP2B4P23634 1241 aa27.91■■■□□ 2.06
DDX39A-215ENST00000590696 KIF4BQ2VIQ3 1234 aa27.91■■■□□ 2.06
DDX39A-215ENST00000590696 GREM2Q9H772 168 aa27.9■■■□□ 2.06
DDX39A-215ENST00000590696 MRS2Q9HD23 443 aa27.9■■■□□ 2.06
DDX39A-215ENST00000590696 ADM5C9JUS6 153 aa27.89■■■□□ 2.06
DDX39A-215ENST00000590696 HUNKP57058 714 aa27.89■■■□□ 2.06
DDX39A-215ENST00000590696 NCBP3Q53F19 620 aaKnown RBP27.89■■■□□ 2.06
DDX39A-215ENST00000590696 RSBN1LQ6PCB5 846 aaPredicted RBP27.89■■■□□ 2.06
DDX39A-215ENST00000590696 POLR2AP24928 1970 aaKnown RBP27.89■■■□□ 2.06
DDX39A-215ENST00000590696 H7C1W4 665 aa27.88■■■□□ 2.05
DDX39A-215ENST00000590696 AGBL3Q8NEM8 1001 aa27.88■■■□□ 2.05
DDX39A-215ENST00000590696 BSDC1Q9NW68 430 aaPredicted RBP27.88■■■□□ 2.05
DDX39A-215ENST00000590696 TSKSQ9UJT2 592 aa27.88■■■□□ 2.05
DDX39A-215ENST00000590696 WTIPA6NIX2 430 aaPredicted RBP27.87■■■□□ 2.05
DDX39A-215ENST00000590696 UBE3BQ7Z3V4 1068 aa27.87■■■□□ 2.05
DDX39A-215ENST00000590696 MINPP1Q9UNW1 487 aa27.87■■■□□ 2.05
DDX39A-215ENST00000590696 MYH3P11055 1940 aa27.86■■■□□ 2.05
DDX39A-215ENST00000590696 FLIIQ13045 1269 aa27.86■■■□□ 2.05
DDX39A-215ENST00000590696 PODNQ7Z5L7 613 aa27.86■■■□□ 2.05
DDX39A-215ENST00000590696 GBA2Q9HCG7 927 aaPredicted RBP27.86■■■□□ 2.05
DDX39A-215ENST00000590696 GGA3Q9NZ52 723 aa27.86■■■□□ 2.05
DDX39A-215ENST00000590696 SALL2Q9Y467 1007 aaPredicted RBP27.86■■■□□ 2.05
DDX39A-215ENST00000590696 BRPF1P55201 1214 aaPredicted RBP27.85■■■□□ 2.05
DDX39A-215ENST00000590696 ZNF280AP59817 542 aaPredicted RBP27.85■■■□□ 2.05
DDX39A-215ENST00000590696 C2orf69Q8N8R5 385 aa27.85■■■□□ 2.05
DDX39A-215ENST00000590696 ASTN2O75129 1339 aaPredicted RBP27.85■■■□□ 2.05
DDX39A-215ENST00000590696 FANCIQ9NVI1 1328 aa27.85■■■□□ 2.05
DDX39A-215ENST00000590696 ZNF609O15014 1411 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 SPEF2Q9C093 1822 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 USP17L3A6NCW0 530 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 USP17L4A6NCW7 530 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 GCKRQ14397 625 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 USP17L1Q7RTZ2 530 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 SULF1Q8IWU6 871 aa27.84■■■□□ 2.05
DDX39A-215ENST00000590696 PSME4Q14997 1843 aa27.83■■■□□ 2.05
DDX39A-215ENST00000590696 ANP32CO43423 234 aa27.83■■■□□ 2.05
DDX39A-215ENST00000590696 CCT4P50991 539 aaKnown RBP27.83■■■□□ 2.05
DDX39A-215ENST00000590696 NOGQ13253 232 aa27.83■■■□□ 2.05
DDX39A-215ENST00000590696 FKBP5Q13451 457 aaPredicted RBP27.83■■■□□ 2.05
DDX39A-215ENST00000590696 SCARF1Q14162 830 aa27.83■■■□□ 2.05
DDX39A-215ENST00000590696 GMLQ99445 158 aa27.83■■■□□ 2.05
DDX39A-215ENST00000590696 MED23Q9ULK4 1368 aa27.83■■■□□ 2.05
DDX39A-215ENST00000590696 CA12O43570 354 aa27.82■■■□□ 2.04
DDX39A-215ENST00000590696 WDR63Q8IWG1 891 aa27.82■■■□□ 2.04
DDX39A-215ENST00000590696 DNAAF4Q8WXU2 420 aa27.82■■■□□ 2.04
DDX39A-215ENST00000590696 ZIC5Q96T25 663 aa27.82■■■□□ 2.04
DDX39A-215ENST00000590696 VAMP4O75379 141 aa27.81■■■□□ 2.04
DDX39A-215ENST00000590696 USP17L8P0C7I0 530 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms