RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CNTROBQ8N137 903 aa20.81■□□□□ 0.92
GCDH-213ENST00000590627 MEIS3Q99687 375 aa20.81■□□□□ 0.92
GCDH-213ENST00000590627 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
GCDH-213ENST00000590627 H7C1W4 665 aa20.8■□□□□ 0.92
GCDH-213ENST00000590627 LMOD1P29536 600 aaPredicted RBP20.8■□□□□ 0.92
GCDH-213ENST00000590627 ATP6V0A2Q9Y487 856 aa20.8■□□□□ 0.92
GCDH-213ENST00000590627 GJA3Q9Y6H8 435 aa20.8■□□□□ 0.92
GCDH-213ENST00000590627 MAP1SQ66K74 1059 aaPredicted RBP20.79■□□□□ 0.92
GCDH-213ENST00000590627 C9orf78Q9NZ63 289 aaPredicted RBP20.79■□□□□ 0.92
GCDH-213ENST00000590627 HDAC5Q9UQL6 1122 aa20.79■□□□□ 0.92
GCDH-213ENST00000590627 LTBP1Q14766 1721 aa20.78■□□□□ 0.92
GCDH-213ENST00000590627 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
GCDH-213ENST00000590627 NBPF7P0C2Y1 421 aaPredicted RBP20.78■□□□□ 0.92
GCDH-213ENST00000590627 SCNN1DP51172 638 aa20.78■□□□□ 0.92
GCDH-213ENST00000590627 CASP7P55210 303 aa20.78■□□□□ 0.92
GCDH-213ENST00000590627 NIM1KQ8IY84 436 aa20.78■□□□□ 0.92
GCDH-213ENST00000590627 RASSF10A6NK89 507 aa20.77■□□□□ 0.92
GCDH-213ENST00000590627 PPIP5K2O43314 1243 aa20.77■□□□□ 0.92
GCDH-213ENST00000590627 BBOX1O75936 387 aa20.77■□□□□ 0.92
GCDH-213ENST00000590627 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
GCDH-213ENST00000590627 VEGFBP49765 207 aa20.77■□□□□ 0.92
GCDH-213ENST00000590627 ZBTB38Q8NAP3 1195 aaPredicted RBP20.77■□□□□ 0.92
GCDH-213ENST00000590627 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
GCDH-213ENST00000590627 LAMB2P55268 1798 aa20.77■□□□□ 0.91
GCDH-213ENST00000590627 USP50Q70EL3 339 aaPredicted RBP20.76■□□□□ 0.91
GCDH-213ENST00000590627 RTFDC1Q9BY42 306 aaPredicted RBP20.76■□□□□ 0.91
GCDH-213ENST00000590627 GNAI2P04899 355 aa20.75■□□□□ 0.91
GCDH-213ENST00000590627 EPS15P42566 896 aa20.75■□□□□ 0.91
GCDH-213ENST00000590627 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
GCDH-213ENST00000590627 SP8Q8IXZ3 490 aa20.75■□□□□ 0.91
GCDH-213ENST00000590627 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
GCDH-213ENST00000590627 FOXN1O15353 648 aa20.74■□□□□ 0.91
GCDH-213ENST00000590627 AOC3Q16853 763 aa20.74■□□□□ 0.91
GCDH-213ENST00000590627 DEFB115Q30KQ5 88 aa20.74■□□□□ 0.91
GCDH-213ENST00000590627 UBE3BQ7Z3V4 1068 aa20.74■□□□□ 0.91
GCDH-213ENST00000590627 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
GCDH-213ENST00000590627 SH3TC1Q8TE82 1336 aa20.74■□□□□ 0.91
GCDH-213ENST00000590627 CAPN15O75808 1086 aa20.73■□□□□ 0.91
GCDH-213ENST00000590627 DDX46Q7L014 1031 aaKnown RBP20.73■□□□□ 0.91
GCDH-213ENST00000590627 AIDAQ96BJ3 306 aa20.73■□□□□ 0.91
GCDH-213ENST00000590627 PLA2G12BQ9BX93 195 aa20.73■□□□□ 0.91
GCDH-213ENST00000590627 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
GCDH-213ENST00000590627 HCLS1P14317 486 aaPredicted RBP20.72■□□□□ 0.91
GCDH-213ENST00000590627 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
GCDH-213ENST00000590627 TMC4Q7Z404 712 aa20.72■□□□□ 0.91
GCDH-213ENST00000590627 MPNDQ8N594 471 aa20.72■□□□□ 0.91
GCDH-213ENST00000590627 FAM89AQ96GI7 184 aa20.72■□□□□ 0.91
GCDH-213ENST00000590627 KAZALD1Q96I82 304 aa20.72■□□□□ 0.91
GCDH-213ENST00000590627 ZNRF3Q9ULT6 936 aa20.72■□□□□ 0.91
GCDH-213ENST00000590627 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
GCDH-213ENST00000590627 GRAPQ13588 217 aa20.71■□□□□ 0.91
GCDH-213ENST00000590627 GRAPLQ8TC17 118 aaPredicted RBP20.71■□□□□ 0.91
GCDH-213ENST00000590627 SUCLG2Q96I99 432 aa20.71■□□□□ 0.91
GCDH-213ENST00000590627 ADARB2Q9NS39 739 aaKnown RBP20.71■□□□□ 0.91
GCDH-213ENST00000590627 WBP1LQ9NX94 342 aa20.71■□□□□ 0.91
GCDH-213ENST00000590627 GPRC5DQ9NZD1 345 aa20.71■□□□□ 0.91
GCDH-213ENST00000590627 PCDHB15Q9Y5E8 787 aa20.71■□□□□ 0.91
GCDH-213ENST00000590627 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
GCDH-213ENST00000590627 HSP90B1P14625 803 aaKnown RBP20.7■□□□□ 0.9
GCDH-213ENST00000590627 CTCFP49711 727 aaPredicted RBP20.7■□□□□ 0.9
GCDH-213ENST00000590627 CXCL9Q07325 125 aa20.7■□□□□ 0.9
GCDH-213ENST00000590627 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
GCDH-213ENST00000590627 RPAP2Q8IXW5 612 aaPredicted RBP20.7■□□□□ 0.9
GCDH-213ENST00000590627 JARID2Q92833 1246 aaPredicted RBP20.7■□□□□ 0.9
GCDH-213ENST00000590627 C1orf115Q9H7X2 142 aa20.7■□□□□ 0.9
GCDH-213ENST00000590627 PPP4R2Q9NY27 417 aa20.7■□□□□ 0.9
GCDH-213ENST00000590627 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
GCDH-213ENST00000590627 MTX1Q13505 466 aa20.69■□□□□ 0.9
GCDH-213ENST00000590627 RABL6Q3YEC7 729 aaPredicted RBP20.69■□□□□ 0.9
GCDH-213ENST00000590627 ABT1Q9ULW3 272 aaKnown RBP20.69■□□□□ 0.9
GCDH-213ENST00000590627 WDR33Q9C0J8 1336 aaKnown RBP20.69■□□□□ 0.9
GCDH-213ENST00000590627 LRRC37AA6NMS7 1700 aa20.68■□□□□ 0.9
GCDH-213ENST00000590627 DDX60Q8IY21 1712 aaKnown RBP20.68■□□□□ 0.9
GCDH-213ENST00000590627 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
GCDH-213ENST00000590627 FOXO4P98177 505 aa20.68■□□□□ 0.9
GCDH-213ENST00000590627 CIAPIN1Q6FI81 312 aa20.68■□□□□ 0.9
GCDH-213ENST00000590627 CEP85Q6P2H3 762 aa20.68■□□□□ 0.9
GCDH-213ENST00000590627 ANKRD44Q8N8A2 993 aa20.68■□□□□ 0.9
GCDH-213ENST00000590627 ATP8B2P98198 1209 aa20.67■□□□□ 0.9
GCDH-213ENST00000590627 MAP2K1Q02750 393 aaPredicted RBP20.67■□□□□ 0.9
GCDH-213ENST00000590627 TNIP1Q15025 636 aa20.67■□□□□ 0.9
GCDH-213ENST00000590627 RTL5Q5HYW3 569 aaPredicted RBP20.67■□□□□ 0.9
GCDH-213ENST00000590627 EPHA10Q5JZY3 1008 aa20.67■□□□□ 0.9
GCDH-213ENST00000590627 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
GCDH-213ENST00000590627 TAF1P21675 1872 aa20.67■□□□□ 0.9
GCDH-213ENST00000590627 PDE8AO60658 829 aa20.66■□□□□ 0.9
GCDH-213ENST00000590627 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
GCDH-213ENST00000590627 SIRT2Q8IXJ6 389 aa20.66■□□□□ 0.9
GCDH-213ENST00000590627 THSD7BQ9C0I4 1608 aa20.65■□□□□ 0.9
GCDH-213ENST00000590627 DUOX1Q9NRD9 1551 aa20.65■□□□□ 0.9
GCDH-213ENST00000590627 CSF1RP07333 972 aa20.65■□□□□ 0.9
GCDH-213ENST00000590627 GMPSP49915 693 aaPredicted RBP20.65■□□□□ 0.9
GCDH-213ENST00000590627 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
GCDH-213ENST00000590627 PGAP2Q9UHJ9 254 aa20.65■□□□□ 0.9
GCDH-213ENST00000590627 ECE1P42892 770 aa20.64■□□□□ 0.89
GCDH-213ENST00000590627 FMR1Q06787 632 aaKnown RBP eCLIP20.64■□□□□ 0.89
GCDH-213ENST00000590627 CST9Q5W186 159 aa20.64■□□□□ 0.89
GCDH-213ENST00000590627 ZC3H15Q8WU90 426 aaKnown RBP20.64■□□□□ 0.89
GCDH-213ENST00000590627 TRAF5O00463 557 aa20.63■□□□□ 0.89
GCDH-213ENST00000590627 RAD17O75943 681 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms