RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 NSFL1CQ9UNZ2 370 aaKnown RBP23.85■■□□□ 1.41
DDX39A-214ENST00000590556 PNMA6EA0A0J9YXQ4 647 aa23.84■■□□□ 1.41
DDX39A-214ENST00000590556 FKBP4Q02790 459 aaKnown RBP eCLIP23.84■■□□□ 1.41
DDX39A-214ENST00000590556 RASSF7Q02833 373 aa23.84■■□□□ 1.41
DDX39A-214ENST00000590556 PTPN12Q05209 780 aaKnown RBP23.84■■□□□ 1.41
DDX39A-214ENST00000590556 CEP85Q6P2H3 762 aa23.84■■□□□ 1.41
DDX39A-214ENST00000590556 PSMD1Q99460 953 aa23.84■■□□□ 1.41
DDX39A-214ENST00000590556 PUS3Q9BZE2 481 aaKnown RBP23.84■■□□□ 1.41
DDX39A-214ENST00000590556 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
DDX39A-214ENST00000590556 LTBP3Q9NS15 1303 aa23.84■■□□□ 1.41
DDX39A-214ENST00000590556 ANKRD2Q9GZV1 360 aa23.83■■□□□ 1.41
DDX39A-214ENST00000590556 XDHP47989 1333 aa23.83■■□□□ 1.4
DDX39A-214ENST00000590556 CHRNDQ07001 517 aa23.82■■□□□ 1.4
DDX39A-214ENST00000590556 POLA2Q14181 598 aa23.82■■□□□ 1.4
DDX39A-214ENST00000590556 RPAP2Q8IXW5 612 aaPredicted RBP23.82■■□□□ 1.4
DDX39A-214ENST00000590556 COPRSQ9NQ92 184 aa23.82■■□□□ 1.4
DDX39A-214ENST00000590556 PODXL2Q9NZ53 605 aa23.82■■□□□ 1.4
DDX39A-214ENST00000590556 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
DDX39A-214ENST00000590556 EYA2O00167 538 aa23.81■■□□□ 1.4
DDX39A-214ENST00000590556 LRRC24Q50LG9 513 aa23.81■■□□□ 1.4
DDX39A-214ENST00000590556 SUPT20HQ8NEM7 779 aa23.81■■□□□ 1.4
DDX39A-214ENST00000590556 SSH3Q8TE77 659 aa23.81■■□□□ 1.4
DDX39A-214ENST00000590556 SIL1Q9H173 461 aa23.81■■□□□ 1.4
DDX39A-214ENST00000590556 RIPOR2Q9Y4F9 1068 aa23.81■■□□□ 1.4
DDX39A-214ENST00000590556 IRX6P78412 446 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-214ENST00000590556 RTFDC1Q9BY42 306 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-214ENST00000590556 ZNF277Q9NRM2 450 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-214ENST00000590556 GGA1Q9UJY5 639 aa23.8■■□□□ 1.4
DDX39A-214ENST00000590556 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
DDX39A-214ENST00000590556 C6orf229H3BNL8 230 aa23.79■■□□□ 1.4
DDX39A-214ENST00000590556 UFL1O94874 794 aa23.79■■□□□ 1.4
DDX39A-214ENST00000590556 LMNB1P20700 586 aa23.79■■□□□ 1.4
DDX39A-214ENST00000590556 HELBQ8NG08 1087 aaPredicted RBP23.79■■□□□ 1.4
DDX39A-214ENST00000590556 EXOC6Q8TAG9 804 aa23.79■■□□□ 1.4
DDX39A-214ENST00000590556 TBC1D16Q8TBP0 767 aa23.79■■□□□ 1.4
DDX39A-214ENST00000590556 MROH5Q6ZUA9 1318 aa23.79■■□□□ 1.4
DDX39A-214ENST00000590556 CIAO1O76071 339 aa23.78■■□□□ 1.4
DDX39A-214ENST00000590556 ATP2B4P23634 1241 aa23.78■■□□□ 1.4
DDX39A-214ENST00000590556 AAMPQ13685 434 aa23.78■■□□□ 1.4
DDX39A-214ENST00000590556 POLLQ9UGP5 575 aa23.78■■□□□ 1.4
DDX39A-214ENST00000590556 SBF1O95248 1867 aa23.78■■□□□ 1.4
DDX39A-214ENST00000590556 LTBP1Q14766 1721 aa23.78■■□□□ 1.4
DDX39A-214ENST00000590556 CCDC88AQ3V6T2 1871 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 HMMRO75330 724 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 TAF5LO75529 589 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 PRELPP51888 382 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 METTL24Q5JXM2 366 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 ATG9AQ7Z3C6 839 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 LEMD3Q9Y2U8 911 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 DUOX1Q9NRD9 1551 aa23.77■■□□□ 1.4
DDX39A-214ENST00000590556 IL15P40933 162 aaPredicted RBP23.76■■□□□ 1.39
DDX39A-214ENST00000590556 IARSP41252 1262 aaKnown RBP23.76■■□□□ 1.39
DDX39A-214ENST00000590556 KCNJ4P48050 445 aa23.76■■□□□ 1.39
DDX39A-214ENST00000590556 G3BP1Q13283 466 aaKnown RBP eCLIP23.76■■□□□ 1.39
DDX39A-214ENST00000590556 C9orf131Q5VYM1 1079 aa23.76■■□□□ 1.39
DDX39A-214ENST00000590556 SIRT2Q8IXJ6 389 aa23.76■■□□□ 1.39
DDX39A-214ENST00000590556 EYA3Q99504 573 aa23.76■■□□□ 1.39
DDX39A-214ENST00000590556 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
DDX39A-214ENST00000590556 CHD4Q14839 1912 aa23.75■■□□□ 1.39
DDX39A-214ENST00000590556 VPS33BQ9H267 617 aa23.75■■□□□ 1.39
DDX39A-214ENST00000590556 A0A1B0GUL6 1792 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 PPIP5K2O43314 1243 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 SURF6O75683 361 aaKnown RBP23.74■■□□□ 1.39
DDX39A-214ENST00000590556 WASHC4Q2M389 1173 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 LARGE2Q8N3Y3 721 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 GPR101Q96P66 508 aaPredicted RBP23.74■■□□□ 1.39
DDX39A-214ENST00000590556 CEP126Q9P2H0 1117 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 PCDHB15Q9Y5E8 787 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 ZNF804BA4D1E1 1349 aa23.74■■□□□ 1.39
DDX39A-214ENST00000590556 WTIPA6NIX2 430 aaPredicted RBP23.73■■□□□ 1.39
DDX39A-214ENST00000590556 OS9Q13438 667 aaPredicted RBP23.73■■□□□ 1.39
DDX39A-214ENST00000590556 AOC3Q16853 763 aa23.73■■□□□ 1.39
DDX39A-214ENST00000590556 ZC3H12CQ9C0D7 883 aaKnown RBP23.73■■□□□ 1.39
DDX39A-214ENST00000590556 UTRNP46939 3433 aa23.72■■□□□ 1.39
DDX39A-214ENST00000590556 SNAP23O00161 211 aa23.72■■□□□ 1.39
DDX39A-214ENST00000590556 RIMBP2O15034 1052 aa23.72■■□□□ 1.39
DDX39A-214ENST00000590556 PDE8BO95263 885 aa23.72■■□□□ 1.39
DDX39A-214ENST00000590556 KIAA2012Q0VF49 1180 aa23.72■■□□□ 1.39
DDX39A-214ENST00000590556 VGLL2Q8N8G2 317 aa23.72■■□□□ 1.39
DDX39A-214ENST00000590556 NOP58Q9Y2X3 529 aaKnown RBP23.72■■□□□ 1.39
DDX39A-214ENST00000590556 DICER1Q9UPY3 1922 aaKnown RBP23.71■■□□□ 1.39
DDX39A-214ENST00000590556 JDP2Q8WYK2 163 aa23.71■■□□□ 1.39
DDX39A-214ENST00000590556 UBE4AQ14139 1066 aa23.7■■□□□ 1.38
DDX39A-214ENST00000590556 TFCP2Q12800 502 aa23.69■■□□□ 1.38
DDX39A-214ENST00000590556 PUM3Q15397 648 aaKnown RBP23.69■■□□□ 1.38
DDX39A-214ENST00000590556 NIM1KQ8IY84 436 aa23.69■■□□□ 1.38
DDX39A-214ENST00000590556 EXOC6BQ9Y2D4 811 aa23.69■■□□□ 1.38
DDX39A-214ENST00000590556 MED23Q9ULK4 1368 aa23.68■■□□□ 1.38
DDX39A-214ENST00000590556 G3V3G9 751 aa23.68■■□□□ 1.38
DDX39A-214ENST00000590556 HSP90AB4PQ58FF6 505 aa23.68■■□□□ 1.38
DDX39A-214ENST00000590556 DCAF8Q5TAQ9 597 aa23.68■■□□□ 1.38
DDX39A-214ENST00000590556 KLRK1P26718 216 aa23.67■■□□□ 1.38
DDX39A-214ENST00000590556 C15orf52Q6ZUT6 534 aaKnown RBP23.67■■□□□ 1.38
DDX39A-214ENST00000590556 SASH1O94885 1247 aa23.66■■□□□ 1.38
DDX39A-214ENST00000590556 ATP2B3Q16720 1220 aa23.66■■□□□ 1.38
DDX39A-214ENST00000590556 DOK7Q18PE1 504 aa23.66■■□□□ 1.38
DDX39A-214ENST00000590556 TXNRD3Q86VQ6 643 aa23.66■■□□□ 1.38
DDX39A-214ENST00000590556 ERC1Q8IUD2 1116 aa23.66■■□□□ 1.38
DDX39A-214ENST00000590556 COL4A5P29400 1685 aa23.66■■□□□ 1.38
DDX39A-214ENST00000590556 NEFLP07196 543 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms