RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CCDC158Q5M9N0 1113 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 CDHR2Q9BYE9 1310 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 EXOC5O00471 708 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 CSF1RP07333 972 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 ST3GAL1Q11201 340 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 TAF7LQ5H9L4 462 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 ZMYM1Q5SVZ6 1142 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 LARP1BQ659C4 914 aaKnown RBP22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 GDPD2Q9HCC8 539 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 CNPY2Q9Y2B0 182 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 CCDC9Q9Y3X0 531 aaKnown RBP22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 PLCH1Q4KWH8 1693 aa22.79■■□□□ 1.24
PRKCSH-209ENST00000589838 GADD45BO75293 160 aaPredicted RBP22.78■■□□□ 1.24
PRKCSH-209ENST00000589838 IFIT5Q13325 482 aaKnown RBP22.78■■□□□ 1.24
PRKCSH-209ENST00000589838 CCDC129Q6ZRS4 1044 aa22.78■■□□□ 1.24
PRKCSH-209ENST00000589838 BCL9O00512 1426 aa22.78■■□□□ 1.24
PRKCSH-209ENST00000589838 RNF113AO15541 343 aaKnown RBP22.77■■□□□ 1.24
PRKCSH-209ENST00000589838 GORABQ5T7V8 394 aa22.77■■□□□ 1.24
PRKCSH-209ENST00000589838 SEC62Q99442 399 aaKnown RBP22.77■■□□□ 1.24
PRKCSH-209ENST00000589838 PUS3Q9BZE2 481 aaKnown RBP22.77■■□□□ 1.24
PRKCSH-209ENST00000589838 VPS37CA5D8V6 355 aaPredicted RBP22.76■■□□□ 1.23
PRKCSH-209ENST00000589838 TSPY26PQ9H489 355 aa22.76■■□□□ 1.23
PRKCSH-209ENST00000589838 TAF6LQ9Y6J9 622 aa22.76■■□□□ 1.23
PRKCSH-209ENST00000589838 COL22A1Q8NFW1 1626 aaPredicted RBP22.76■■□□□ 1.23
PRKCSH-209ENST00000589838 ESPNB1AK53 854 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 CYP21A2P08686 494 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 CLCN1P35523 988 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 TTC39AQ5SRH9 613 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 CCDC183Q5T5S1 534 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 FAM89AQ96GI7 184 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 ANKRD36CQ5JPF3 1778 aa22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 ZFYP08048 801 aaPredicted RBP22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
PRKCSH-209ENST00000589838 ABCC12Q96J65 1359 aa22.74■■□□□ 1.23
PRKCSH-209ENST00000589838 TCEANC2Q96MN5 208 aa22.74■■□□□ 1.23
PRKCSH-209ENST00000589838 CDCA7Q9BWT1 371 aaPredicted RBP22.74■■□□□ 1.23
PRKCSH-209ENST00000589838 NLRP10Q86W26 655 aa22.73■■□□□ 1.23
PRKCSH-209ENST00000589838 ERVV-1B6SEH8 477 aa22.73■■□□□ 1.23
PRKCSH-209ENST00000589838 Q6ZUG5 572 aa22.73■■□□□ 1.23
PRKCSH-209ENST00000589838 CHMP4CQ96CF2 233 aa22.73■■□□□ 1.23
PRKCSH-209ENST00000589838 XAGE2Q96GT9 111 aa22.73■■□□□ 1.23
PRKCSH-209ENST00000589838 AHDC1Q5TGY3 1603 aaPredicted RBP22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 FIBPO43427 364 aa22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 FGD1P98174 961 aa22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 HS1BP3Q53T59 392 aa22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 DHX32Q7L7V1 743 aaKnown RBP22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 GTF3C6Q969F1 213 aa22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 WNK3Q9BYP7 1800 aa22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 MYH3P11055 1940 aa22.72■■□□□ 1.23
PRKCSH-209ENST00000589838 HSP90B1P14625 803 aaKnown RBP22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 KRT85P78386 507 aa22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 DNM1Q05193 864 aaKnown RBP22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 KAT6BQ8WYB5 2073 aa22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 ANKRD18BA2A2Z9 1011 aa22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 CHGBP05060 677 aa22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 FAM184AQ8NB25 1140 aa22.71■■□□□ 1.23
PRKCSH-209ENST00000589838 LAMA4Q16363 1823 aa22.7■■□□□ 1.23
PRKCSH-209ENST00000589838 MAST3O60307 1309 aa22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 HSPD1P10809 573 aaKnown RBP22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 IL6STP40189 918 aaPredicted RBP22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 FKBP4Q02790 459 aaKnown RBP eCLIP22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 COL9A3Q14050 684 aaPredicted RBP22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 HLFQ16534 295 aa22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 LLPHQ9BRT6 129 aaKnown RBP22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 CTNNA3Q9UI47 895 aa22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.7■■□□□ 1.22
PRKCSH-209ENST00000589838 NUP98P52948 1817 aa22.69■■□□□ 1.22
PRKCSH-209ENST00000589838 STK3Q13188 491 aa22.69■■□□□ 1.22
PRKCSH-209ENST00000589838 PDLIM2Q96JY6 352 aa22.69■■□□□ 1.22
PRKCSH-209ENST00000589838 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
PRKCSH-209ENST00000589838 GPTP24298 496 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 CTSWP56202 376 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 METTL24Q5JXM2 366 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 TTLL11Q8NHH1 800 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 RIPOR2Q9Y4F9 1068 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 ATP2B3Q16720 1220 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 LDHAL6AQ6ZMR3 332 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 SYTL4Q96C24 671 aaPredicted RBP22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 SLC4A9Q96Q91 983 aa22.68■■□□□ 1.22
PRKCSH-209ENST00000589838 ELP1O95163 1332 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 PDE8AO60658 829 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 ITGA6P23229 1130 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 ADORA1P30542 326 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 UVSSAQ2YD98 709 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 TRMT112Q9UI30 125 aaKnown RBP22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 ZBTB1Q9Y2K1 713 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 KIF3AQ9Y496 699 aa22.67■■□□□ 1.22
PRKCSH-209ENST00000589838 IRS4O14654 1257 aaPredicted RBP22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 PFKFB2O60825 505 aa22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 ZSCAN25Q6NSZ9 544 aa22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 STOX1Q6ZVD7 989 aa22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 BRF1Q92994 677 aa22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 AK7Q96M32 723 aa22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 CCDC85AQ96PX6 553 aaPredicted RBP22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 SCAND2PQ9GZW5 306 aaPredicted RBP22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 THRAP3Q9Y2W1 955 aaKnown RBP22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 EXOSC10Q01780 885 aaKnown RBP22.66■■□□□ 1.22
PRKCSH-209ENST00000589838 DZIP3Q86Y13 1208 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms