RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CDHR2Q9BYE9 1310 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 ARAP2Q8WZ64 1704 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 CHD4Q14839 1912 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 APBA3O96018 575 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 MCCP23508 829 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 RABEP1Q15276 862 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 ZNF594Q96JF6 807 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-206ENST00000588860 PLA2G12BQ9BX93 195 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 ZNF609O15014 1411 aa10.65□□□□□ -0.7
SMAD4-206ENST00000588860 A0A1B0GUL6 1792 aa10.65□□□□□ -0.71
SMAD4-206ENST00000588860 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 EYA2O00167 538 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 CIAO1O76071 339 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-206ENST00000588860 CCDC57Q2TAC2 916 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 TAF7LQ5H9L4 462 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 RASEFQ8IZ41 740 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 EVI5LQ96CN4 794 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 SLKQ9H2G2 1235 aaPredicted RBP10.64□□□□□ -0.71
SMAD4-206ENST00000588860 DIAPH3Q9NSV4 1193 aa10.64□□□□□ -0.71
SMAD4-206ENST00000588860 TRMT112Q9UI30 125 aaKnown RBP10.64□□□□□ -0.71
SMAD4-206ENST00000588860 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
SMAD4-206ENST00000588860 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 TRIM37O94972 964 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 LRRC24Q50LG9 513 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 LINC00116Q8NCU8 138 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 RUFY2Q8WXA3 655 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 CCDC85AQ96PX6 553 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-206ENST00000588860 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 BOLA2Q9H3K6 86 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 DBNLQ9UJU6 430 aaKnown RBP10.63□□□□□ -0.71
SMAD4-206ENST00000588860 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
SMAD4-206ENST00000588860 COL24A1Q17RW2 1714 aa10.63□□□□□ -0.71
SMAD4-206ENST00000588860 UBN2Q6ZU65 1347 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 TAF1P21675 1872 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 MYO5AQ9Y4I1 1855 aaKnown RBP10.62□□□□□ -0.71
SMAD4-206ENST00000588860 IRS4O14654 1257 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-206ENST00000588860 SGSM2O43147 1006 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 CAMTA2O94983 1202 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 CSF1RP07333 972 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 CTSWP56202 376 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 IFIT5Q13325 482 aaKnown RBP10.62□□□□□ -0.71
SMAD4-206ENST00000588860 IER5LQ5T953 404 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 PTF1AQ7RTS3 328 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 SYNE4Q8N205 404 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 FSD1Q9BTV5 496 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 PUS3Q9BZE2 481 aaKnown RBP10.62□□□□□ -0.71
SMAD4-206ENST00000588860 AKAP11Q9UKA4 1901 aa10.62□□□□□ -0.71
SMAD4-206ENST00000588860 CNTNAP4Q9C0A0 1308 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 RIC1Q4ADV7 1423 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 K7ELQ4 463 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-206ENST00000588860 HIP1O00291 1037 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 PDE8AO60658 829 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 CD2BP2O95400 341 aaKnown RBP10.61□□□□□ -0.71
SMAD4-206ENST00000588860 ATP5JP18859 108 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 CWC27Q6UX04 472 aaKnown RBP10.61□□□□□ -0.71
SMAD4-206ENST00000588860 KIAA1211Q6ZU35 1233 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 NEUROD6Q96NK8 337 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 IL25Q9H293 177 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 GPR108Q9NPR9 543 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 LAMA4Q16363 1823 aa10.61□□□□□ -0.71
SMAD4-206ENST00000588860 RAD50Q92878 1312 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 UBR3Q6ZT12 1888 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 ANKRD18BA2A2Z9 1011 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 FAM177BA6PVY3 158 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 EPB41L2O43491 1005 aaKnown RBP10.6□□□□□ -0.71
SMAD4-206ENST00000588860 VASPP50552 380 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-206ENST00000588860 KCNQ4P56696 695 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 NMIQ13287 307 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-206ENST00000588860 PARP10Q53GL7 1025 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 TTLL11Q8NHH1 800 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 UTP14AQ9BVJ6 771 aaKnown RBP10.6□□□□□ -0.71
SMAD4-206ENST00000588860 ANTXR1Q9H6X2 564 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 GREM2Q9H772 168 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 CEP126Q9P2H0 1117 aa10.6□□□□□ -0.71
SMAD4-206ENST00000588860 SH3TC1Q8TE82 1336 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 MYH13Q9UKX3 1938 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 ST18O60284 1047 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 HSP90AA1P07900 732 aaKnown RBP10.59□□□□□ -0.71
SMAD4-206ENST00000588860 ITGA6P23229 1130 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 ANAPC15P60006 121 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 AK7Q96M32 723 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 DNAJC2Q99543 621 aaKnown RBP10.59□□□□□ -0.71
SMAD4-206ENST00000588860 HAUS7Q99871 368 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
SMAD4-206ENST00000588860 CCNL1Q9UK58 526 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-206ENST00000588860 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMAD4-206ENST00000588860 RFX7Q2KHR2 1363 aa10.59□□□□□ -0.71
SMAD4-206ENST00000588860 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms