RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
SAFB-205ENST00000588852 GOLIM4O00461 696 aa18.02■□□□□ 0.47
SAFB-205ENST00000588852 ZNF165P49910 485 aa18.02■□□□□ 0.47
SAFB-205ENST00000588852 COPRSQ9NQ92 184 aa18.02■□□□□ 0.47
SAFB-205ENST00000588852 HMGN5P82970 282 aaKnown RBP18.01■□□□□ 0.47
SAFB-205ENST00000588852 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
SAFB-205ENST00000588852 CLSTN2Q9H4D0 955 aa18.01■□□□□ 0.47
SAFB-205ENST00000588852 PHKG2P15735 406 aa18.01■□□□□ 0.47
SAFB-205ENST00000588852 CCDC144BQ3MJ40 725 aa18.01■□□□□ 0.47
SAFB-205ENST00000588852 CCDC144CPQ8IYA2 1237 aa18.01■□□□□ 0.47
SAFB-205ENST00000588852 RGPD5Q99666 1765 aa18.01■□□□□ 0.47
SAFB-205ENST00000588852 ZNF594Q96JF6 807 aaPredicted RBP18■□□□□ 0.47
SAFB-205ENST00000588852 CTDNEP1O95476 244 aa18■□□□□ 0.47
SAFB-205ENST00000588852 CBX1P83916 185 aa18■□□□□ 0.47
SAFB-205ENST00000588852 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
SAFB-205ENST00000588852 GPHNQ9NQX3 736 aaPredicted RBP18■□□□□ 0.47
SAFB-205ENST00000588852 HMG20BQ9P0W2 317 aa18■□□□□ 0.47
SAFB-205ENST00000588852 TAOK2Q9UL54 1235 aa18■□□□□ 0.47
SAFB-205ENST00000588852 MCMDC2Q4G0Z9 681 aa17.99■□□□□ 0.47
SAFB-205ENST00000588852 C11orf57Q6ZUT1 292 aaPredicted RBP17.99■□□□□ 0.47
SAFB-205ENST00000588852 NCAPD2Q15021 1401 aa17.99■□□□□ 0.47
SAFB-205ENST00000588852 NAA30Q147X3 362 aaPredicted RBP17.99■□□□□ 0.47
SAFB-205ENST00000588852 TTLL5Q6EMB2 1281 aa17.99■□□□□ 0.47
SAFB-205ENST00000588852 GOLPH3LQ9H4A5 285 aa17.99■□□□□ 0.47
SAFB-205ENST00000588852 CSB-PGBD3P0DP91 1061 aa17.99■□□□□ 0.47
SAFB-205ENST00000588852 C5P01031 1676 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 CYP27B1O15528 508 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 ADD1P35611 737 aaKnown RBP17.98■□□□□ 0.47
SAFB-205ENST00000588852 ZNF75DP51815 510 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 RAB11FIP4Q86YS3 637 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 JCADQ9P266 1359 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.474e-9■■■■□ 21.5
SAFB-205ENST00000588852 PPP4R3BQ5MIZ7 849 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 OTUD7BQ6GQQ9 843 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
SAFB-205ENST00000588852 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
SAFB-205ENST00000588852 GOLGA6L6A8MZA4 724 aa17.97■□□□□ 0.47
SAFB-205ENST00000588852 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
SAFB-205ENST00000588852 HAUS7Q99871 368 aa17.97■□□□□ 0.47
SAFB-205ENST00000588852 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
SAFB-205ENST00000588852 DDX19AQ9NUU7 478 aaKnown RBP17.97■□□□□ 0.47
SAFB-205ENST00000588852 LRRC24Q50LG9 513 aa17.97■□□□□ 0.47
SAFB-205ENST00000588852 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
SAFB-205ENST00000588852 NSUN7Q8NE18 718 aaKnown RBP17.97■□□□□ 0.47
SAFB-205ENST00000588852 CHD2O14647 1828 aaKnown RBP17.97■□□□□ 0.47
SAFB-205ENST00000588852 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
SAFB-205ENST00000588852 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
SAFB-205ENST00000588852 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
SAFB-205ENST00000588852 PLA2G4DQ86XP0 818 aa17.96■□□□□ 0.47
SAFB-205ENST00000588852 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
SAFB-205ENST00000588852 CCDC94Q9BW85 323 aaPredicted RBP17.96■□□□□ 0.47
SAFB-205ENST00000588852 GJB4Q9NTQ9 266 aa17.96■□□□□ 0.47
SAFB-205ENST00000588852 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
SAFB-205ENST00000588852 RBM43Q6ZSC3 357 aaKnown RBP17.96■□□□□ 0.47
SAFB-205ENST00000588852 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
SAFB-205ENST00000588852 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
SAFB-205ENST00000588852 KRT32Q14532 448 aa17.95■□□□□ 0.46
SAFB-205ENST00000588852 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
SAFB-205ENST00000588852 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
SAFB-205ENST00000588852 MEGF6O75095 1541 aa17.95■□□□□ 0.46
SAFB-205ENST00000588852 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
SAFB-205ENST00000588852 CASP7P55210 303 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 HAND2P61296 217 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 ATG9AQ7Z3C6 839 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 KBTBD3Q8NAB2 608 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 PUS3Q9BZE2 481 aaKnown RBP17.94■□□□□ 0.46
SAFB-205ENST00000588852 NBPF26B4DH59 902 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 NBPF14Q5TI25 921 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 NBPF10Q6P3W6 841 aaKnown RBP17.94■□□□□ 0.46
SAFB-205ENST00000588852 NBPF15Q8N660 670 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 TDRD7Q8NHU6 1098 aaKnown RBP17.94■□□□□ 0.46
SAFB-205ENST00000588852 SIPA1L3O60292 1781 aaPredicted RBP17.94■□□□□ 0.46
SAFB-205ENST00000588852 USP27XA6NNY8 438 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 FOXO4P98177 505 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
SAFB-205ENST00000588852 ZBTB3Q9H5J0 574 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 PAG1Q9NWQ8 432 aa17.94■□□□□ 0.46
SAFB-205ENST00000588852 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
SAFB-205ENST00000588852 MTERF4Q7Z6M4 381 aaKnown RBP17.93■□□□□ 0.46
SAFB-205ENST00000588852 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
SAFB-205ENST00000588852 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
SAFB-205ENST00000588852 ZNF592Q92610 1267 aa17.93■□□□□ 0.46
SAFB-205ENST00000588852 E7EWF7 191 aa17.93■□□□□ 0.46
SAFB-205ENST00000588852 A1BGP04217 495 aa17.93■□□□□ 0.46
SAFB-205ENST00000588852 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
SAFB-205ENST00000588852 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.462e-8■■■□□ 14.9
SAFB-205ENST00000588852 SNW1Q13573 536 aaKnown RBP17.93■□□□□ 0.46
SAFB-205ENST00000588852 IQCB1Q15051 598 aa17.93■□□□□ 0.46
SAFB-205ENST00000588852 PFKFB2O60825 505 aa17.92■□□□□ 0.46
SAFB-205ENST00000588852 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
SAFB-205ENST00000588852 PRDM4Q9UKN5 801 aa17.92■□□□□ 0.46
SAFB-205ENST00000588852 FKBP4Q02790 459 aaKnown RBP eCLIP17.92■□□□□ 0.46
SAFB-205ENST00000588852 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
SAFB-205ENST00000588852 FILIP1Q7Z7B0 1213 aa17.92■□□□□ 0.46
SAFB-205ENST00000588852 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
SAFB-205ENST00000588852 ME1P48163 572 aa17.91■□□□□ 0.46
SAFB-205ENST00000588852 CABP4P57796 275 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms