RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 G3V3G9 751 aa18.29■□□□□ 0.52
ERCC1-205ENST00000587888 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
ERCC1-205ENST00000587888 DCAF8Q5TAQ9 597 aa18.29■□□□□ 0.52
ERCC1-205ENST00000587888 DPF2Q92785 391 aa18.29■□□□□ 0.52
ERCC1-205ENST00000587888 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
ERCC1-205ENST00000587888 TSKSQ9UJT2 592 aa18.29■□□□□ 0.52
ERCC1-205ENST00000587888 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
ERCC1-205ENST00000587888 MAP2K2P36507 400 aa18.28■□□□□ 0.52
ERCC1-205ENST00000587888 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
ERCC1-205ENST00000587888 PDE8AO60658 829 aa18.27■□□□□ 0.52
ERCC1-205ENST00000587888 EGFRP00533 1210 aa18.27■□□□□ 0.52
ERCC1-205ENST00000587888 PCCAP05165 728 aaPredicted RBP18.27■□□□□ 0.52
ERCC1-205ENST00000587888 CCDC30Q5VVM6 783 aa18.27■□□□□ 0.52
ERCC1-205ENST00000587888 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.52
ERCC1-205ENST00000587888 CWC25Q9NXE8 425 aaPredicted RBP18.27■□□□□ 0.52
ERCC1-205ENST00000587888 UFL1O94874 794 aa18.26■□□□□ 0.51
ERCC1-205ENST00000587888 DDX58O95786 925 aaKnown RBP18.26■□□□□ 0.51
ERCC1-205ENST00000587888 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
ERCC1-205ENST00000587888 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
ERCC1-205ENST00000587888 METTL22Q9BUU2 404 aaPredicted RBP18.26■□□□□ 0.51
ERCC1-205ENST00000587888 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
ERCC1-205ENST00000587888 RPS12P25398 132 aaKnown RBP18.25■□□□□ 0.51
ERCC1-205ENST00000587888 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
ERCC1-205ENST00000587888 DCPSQ96C86 337 aaKnown RBP18.25■□□□□ 0.51
ERCC1-205ENST00000587888 ABHD8Q96I13 439 aa18.25■□□□□ 0.51
ERCC1-205ENST00000587888 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
ERCC1-205ENST00000587888 PODXL2Q9NZ53 605 aa18.25■□□□□ 0.51
ERCC1-205ENST00000587888 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
ERCC1-205ENST00000587888 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
ERCC1-205ENST00000587888 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
ERCC1-205ENST00000587888 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
ERCC1-205ENST00000587888 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
ERCC1-205ENST00000587888 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
ERCC1-205ENST00000587888 HUNKP57058 714 aa18.23■□□□□ 0.51
ERCC1-205ENST00000587888 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
ERCC1-205ENST00000587888 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
ERCC1-205ENST00000587888 KIF4BQ2VIQ3 1234 aa18.22■□□□□ 0.51
ERCC1-205ENST00000587888 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
ERCC1-205ENST00000587888 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
ERCC1-205ENST00000587888 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
ERCC1-205ENST00000587888 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
ERCC1-205ENST00000587888 THSD7BQ9C0I4 1608 aa18.21■□□□□ 0.51
ERCC1-205ENST00000587888 C2orf69Q8N8R5 385 aa18.21■□□□□ 0.51
ERCC1-205ENST00000587888 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
ERCC1-205ENST00000587888 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
ERCC1-205ENST00000587888 GBA2Q9HCG7 927 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-205ENST00000587888 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-205ENST00000587888 IGKV5-2P06315 115 aa18.2■□□□□ 0.5
ERCC1-205ENST00000587888 BRPF1P55201 1214 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-205ENST00000587888 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-205ENST00000587888 CCDC85CA6NKD9 419 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 CA12O43570 354 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 ATP2B4P23634 1241 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 CTSWP56202 376 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 NOGQ13253 232 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 CWF19L2Q2TBE0 894 aaKnown RBP18.19■□□□□ 0.5
ERCC1-205ENST00000587888 RGMBQ6NW40 437 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 SULF1Q8IWU6 871 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 XDHP47989 1333 aa18.19■□□□□ 0.5
ERCC1-205ENST00000587888 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
ERCC1-205ENST00000587888 SCARF1Q14162 830 aa18.18■□□□□ 0.5
ERCC1-205ENST00000587888 RSBN1LQ6PCB5 846 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-205ENST00000587888 G2E3Q7L622 706 aa18.18■□□□□ 0.5
ERCC1-205ENST00000587888 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
ERCC1-205ENST00000587888 CDC5LQ99459 802 aaKnown RBP18.18■□□□□ 0.5
ERCC1-205ENST00000587888 GGA3Q9NZ52 723 aa18.18■□□□□ 0.5
ERCC1-205ENST00000587888 SCN9AQ15858 1988 aa18.18■□□□□ 0.5
ERCC1-205ENST00000587888 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
ERCC1-205ENST00000587888 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
ERCC1-205ENST00000587888 ANGEL2Q5VTE6 544 aaKnown RBP18.17■□□□□ 0.5
ERCC1-205ENST00000587888 WWC1Q8IX03 1113 aa18.17■□□□□ 0.5
ERCC1-205ENST00000587888 AGBL3Q8NEM8 1001 aa18.17■□□□□ 0.5
ERCC1-205ENST00000587888 GREM2Q9H772 168 aa18.17■□□□□ 0.5
ERCC1-205ENST00000587888 MINPP1Q9UNW1 487 aa18.17■□□□□ 0.5
ERCC1-205ENST00000587888 USP17L3A6NCW0 530 aa18.16■□□□□ 0.5
ERCC1-205ENST00000587888 USP17L4A6NCW7 530 aa18.16■□□□□ 0.5
ERCC1-205ENST00000587888 USP17L1Q7RTZ2 530 aa18.16■□□□□ 0.5
ERCC1-205ENST00000587888 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 FAM155AB1AL88 458 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-205ENST00000587888 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 ZNF280AP59817 542 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-205ENST00000587888 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 PODNQ7Z5L7 613 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 FBXW7Q969H0 707 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 CCDC102AQ96A19 550 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 CDCA5Q96FF9 252 aa18.15■□□□□ 0.5
ERCC1-205ENST00000587888 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-205ENST00000587888 SCAF8Q9UPN6 1271 aaKnown RBP18.15■□□□□ 0.5
ERCC1-205ENST00000587888 H7C1W4 665 aa18.14■□□□□ 0.49
ERCC1-205ENST00000587888 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
ERCC1-205ENST00000587888 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
ERCC1-205ENST00000587888 GMLQ99445 158 aa18.14■□□□□ 0.49
ERCC1-205ENST00000587888 MYOZ2Q9NPC6 264 aa18.14■□□□□ 0.49
ERCC1-205ENST00000587888 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
ERCC1-205ENST00000587888 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
ERCC1-205ENST00000587888 MXD3Q9BW11 206 aa18.13■□□□□ 0.49
ERCC1-205ENST00000587888 MCOLN1Q9GZU1 580 aa18.13■□□□□ 0.49
ERCC1-205ENST00000587888 CASP8AP2Q9UKL3 1982 aa18.13■□□□□ 0.49
ERCC1-205ENST00000587888 IGHMBP2P38935 993 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms