RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
CHAF1A-204ENST00000587368 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
CHAF1A-204ENST00000587368 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
CHAF1A-204ENST00000587368 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
CHAF1A-204ENST00000587368 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
CHAF1A-204ENST00000587368 COL4A1P02462 1669 aa17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 POTECB2RU33 542 aa17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 BCAR3O75815 825 aa17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 RBM46Q8TBY0 533 aaKnown RBP17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
CHAF1A-204ENST00000587368 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
CHAF1A-204ENST00000587368 MYH3P11055 1940 aa17.22■□□□□ 0.35
CHAF1A-204ENST00000587368 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
CHAF1A-204ENST00000587368 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
CHAF1A-204ENST00000587368 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
CHAF1A-204ENST00000587368 COL4A5P29400 1685 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 G3V3G9 751 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 CXCL9Q07325 125 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 TNIP1Q15025 636 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 DCAF8Q5TAQ9 597 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
CHAF1A-204ENST00000587368 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
CHAF1A-204ENST00000587368 GPR101Q96P66 508 aaPredicted RBP17.2■□□□□ 0.34
CHAF1A-204ENST00000587368 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
CHAF1A-204ENST00000587368 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
CHAF1A-204ENST00000587368 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
CHAF1A-204ENST00000587368 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 TRIM27P14373 513 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 LMOD1P29536 600 aaPredicted RBP17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 FSTL1Q12841 308 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 LDHAL6AQ6ZMR3 332 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 TAF1DQ9H5J8 278 aaPredicted RBP17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
CHAF1A-204ENST00000587368 ECE2O60344 883 aa17.18■□□□□ 0.34
CHAF1A-204ENST00000587368 RAD17O75943 681 aa17.18■□□□□ 0.34
CHAF1A-204ENST00000587368 CHRNDQ07001 517 aa17.18■□□□□ 0.34
CHAF1A-204ENST00000587368 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
CHAF1A-204ENST00000587368 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
CHAF1A-204ENST00000587368 YDJCA8MPS7 323 aa17.17■□□□□ 0.34
CHAF1A-204ENST00000587368 EPHX2P34913 555 aa17.17■□□□□ 0.34
CHAF1A-204ENST00000587368 KCNJ4P48050 445 aa17.17■□□□□ 0.34
CHAF1A-204ENST00000587368 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
CHAF1A-204ENST00000587368 ZNF804BA4D1E1 1349 aa17.17■□□□□ 0.34
CHAF1A-204ENST00000587368 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
CHAF1A-204ENST00000587368 CLUAP1Q96AJ1 413 aa17.16■□□□□ 0.34
CHAF1A-204ENST00000587368 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 GNAI3P08754 354 aa17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 SCNN1DP51172 638 aa17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 EAPPQ56P03 285 aaPredicted RBP17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 LTBP1Q14766 1721 aa17.15■□□□□ 0.34
CHAF1A-204ENST00000587368 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 PSMD14O00487 310 aa17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 TAF5LO75529 589 aa17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 HSPA6P17066 643 aa17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 LDHDQ86WU2 507 aa17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 HELBQ8NG08 1087 aaPredicted RBP17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 MEIS3Q99687 375 aa17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 GPRC5DQ9NZD1 345 aa17.14■□□□□ 0.33
CHAF1A-204ENST00000587368 SCN4AP35499 1836 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 PLIN1O60240 522 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 EPS15P42566 896 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 CHADLQ6NUI6 762 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 DPF2Q92785 391 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 CLEC11AQ9Y240 323 aa17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
CHAF1A-204ENST00000587368 RPS12P25398 132 aaKnown RBP17.12■□□□□ 0.33
CHAF1A-204ENST00000587368 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
CHAF1A-204ENST00000587368 PUS3Q9BZE2 481 aaKnown RBP17.12■□□□□ 0.33
CHAF1A-204ENST00000587368 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
CHAF1A-204ENST00000587368 RIPOR2Q9Y4F9 1068 aa17.12■□□□□ 0.33
CHAF1A-204ENST00000587368 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
CHAF1A-204ENST00000587368 H7C1D1 291 aa17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 POTEIP0CG38 1075 aa17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 POTEJP0CG39 1038 aa17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 ZBTB12Q9Y330 459 aaPredicted RBP17.11■□□□□ 0.33
CHAF1A-204ENST00000587368 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
CHAF1A-204ENST00000587368 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms