RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 MEIS3Q99687 375 aa21.67■■□□□ 1.06
DNMT1-212ENST00000587197 GREM2Q9H772 168 aa21.67■■□□□ 1.06
DNMT1-212ENST00000587197 HACL1Q9UJ83 578 aa21.67■■□□□ 1.06
DNMT1-212ENST00000587197 PLIN1O60240 522 aa21.66■■□□□ 1.06
DNMT1-212ENST00000587197 LMBR1LQ6UX01 489 aa21.66■■□□□ 1.06
DNMT1-212ENST00000587197 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
DNMT1-212ENST00000587197 CELF1Q92879 486 aaKnown RBP21.66■■□□□ 1.06
DNMT1-212ENST00000587197 SEC31BQ9NQW1 1179 aa21.66■■□□□ 1.06
DNMT1-212ENST00000587197 SCN4AP35499 1836 aa21.66■■□□□ 1.06
DNMT1-212ENST00000587197 AOC3Q16853 763 aa21.65■■□□□ 1.06
DNMT1-212ENST00000587197 TAF1DQ9H5J8 278 aaPredicted RBP21.65■■□□□ 1.06
DNMT1-212ENST00000587197 BICC1Q9H694 974 aaKnown RBP21.65■■□□□ 1.06
DNMT1-212ENST00000587197 ITGA6P23229 1130 aa21.64■■□□□ 1.05
DNMT1-212ENST00000587197 LMOD1P29536 600 aaPredicted RBP21.64■■□□□ 1.05
DNMT1-212ENST00000587197 FAM161AQ3B820 660 aa21.64■■□□□ 1.05
DNMT1-212ENST00000587197 CHADLQ6NUI6 762 aa21.64■■□□□ 1.05
DNMT1-212ENST00000587197 PNMA8AQ86V59 439 aaPredicted RBP21.64■■□□□ 1.05
DNMT1-212ENST00000587197 ITPRIPQ8IWB1 547 aa21.64■■□□□ 1.05
DNMT1-212ENST00000587197 ANKRD44Q8N8A2 993 aa21.64■■□□□ 1.05
DNMT1-212ENST00000587197 CCDC85AQ96PX6 553 aaPredicted RBP21.64■■□□□ 1.05
DNMT1-212ENST00000587197 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.05
DNMT1-212ENST00000587197 ZBTB7BO15156 539 aaPredicted RBP21.63■■□□□ 1.05
DNMT1-212ENST00000587197 KIAA2012Q0VF49 1180 aa21.63■■□□□ 1.05
DNMT1-212ENST00000587197 IFIT5Q13325 482 aaKnown RBP21.63■■□□□ 1.05
DNMT1-212ENST00000587197 LDHDQ86WU2 507 aa21.63■■□□□ 1.05
DNMT1-212ENST00000587197 ANKRD18AQ8IVF6 992 aa21.63■■□□□ 1.05
DNMT1-212ENST00000587197 ZNRF3Q9ULT6 936 aa21.63■■□□□ 1.05
DNMT1-212ENST00000587197 NSFL1CQ9UNZ2 370 aaKnown RBP21.63■■□□□ 1.05
DNMT1-212ENST00000587197 ANKRD18BA2A2Z9 1011 aa21.62■■□□□ 1.05
DNMT1-212ENST00000587197 EPHX2P34913 555 aa21.62■■□□□ 1.05
DNMT1-212ENST00000587197 RRP1P56182 461 aaKnown RBP21.62■■□□□ 1.05
DNMT1-212ENST00000587197 MVPQ14764 893 aaKnown RBP21.62■■□□□ 1.05
DNMT1-212ENST00000587197 SLC51AQ86UW1 340 aa21.62■■□□□ 1.05
DNMT1-212ENST00000587197 BSDC1Q9NW68 430 aaPredicted RBP21.62■■□□□ 1.05
DNMT1-212ENST00000587197 MYH3P11055 1940 aa21.62■■□□□ 1.05
DNMT1-212ENST00000587197 GNAI2P04899 355 aa21.61■■□□□ 1.05
DNMT1-212ENST00000587197 CCDC57Q2TAC2 916 aa21.61■■□□□ 1.05
DNMT1-212ENST00000587197 EAPPQ56P03 285 aaPredicted RBP21.61■■□□□ 1.05
DNMT1-212ENST00000587197 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
DNMT1-212ENST00000587197 DDX19BQ9UMR2 479 aa21.61■■□□□ 1.05
DNMT1-212ENST00000587197 CLEC11AQ9Y240 323 aa21.61■■□□□ 1.05
DNMT1-212ENST00000587197 LRRFIP2Q9Y608 721 aaKnown RBP21.61■■□□□ 1.05
DNMT1-212ENST00000587197 IGHMBP2P38935 993 aaKnown RBP21.6■■□□□ 1.05
DNMT1-212ENST00000587197 EYA3Q99504 573 aa21.6■■□□□ 1.05
DNMT1-212ENST00000587197 CHMP3Q9Y3E7 222 aa21.6■■□□□ 1.05
DNMT1-212ENST00000587197 TAF1P21675 1872 aa21.6■■□□□ 1.05
DNMT1-212ENST00000587197 C6orf229H3BNL8 230 aa21.59■■□□□ 1.05
DNMT1-212ENST00000587197 TNIP1Q15025 636 aa21.59■■□□□ 1.05
DNMT1-212ENST00000587197 WASHC4Q2M389 1173 aa21.59■■□□□ 1.05
DNMT1-212ENST00000587197 COL4A5P29400 1685 aa21.59■■□□□ 1.05
DNMT1-212ENST00000587197 LRRC37AA6NMS7 1700 aa21.58■■□□□ 1.05
DNMT1-212ENST00000587197 MTX1Q13505 466 aa21.58■■□□□ 1.05
DNMT1-212ENST00000587197 C20orf194Q5TEA3 1177 aa21.58■■□□□ 1.05
DNMT1-212ENST00000587197 DNAJC5GQ8N7S2 189 aa21.58■■□□□ 1.05
DNMT1-212ENST00000587197 COG6Q9Y2V7 657 aa21.58■■□□□ 1.05
DNMT1-212ENST00000587197 POTEIP0CG38 1075 aa21.57■■□□□ 1.04
DNMT1-212ENST00000587197 POTEJP0CG39 1038 aa21.57■■□□□ 1.04
DNMT1-212ENST00000587197 CIAPIN1Q6FI81 312 aa21.57■■□□□ 1.04
DNMT1-212ENST00000587197 MPHOSPH8Q99549 860 aa21.57■■□□□ 1.04
DNMT1-212ENST00000587197 GPSM2P81274 684 aa21.56■■□□□ 1.04
DNMT1-212ENST00000587197 CXCL9Q07325 125 aa21.56■■□□□ 1.04
DNMT1-212ENST00000587197 PODXL2Q9NZ53 605 aa21.56■■□□□ 1.04
DNMT1-212ENST00000587197 ANKIB1Q9P2G1 1089 aa21.56■■□□□ 1.04
DNMT1-212ENST00000587197 COL4A1P02462 1669 aa21.56■■□□□ 1.04
DNMT1-212ENST00000587197 TAF7LQ5H9L4 462 aa21.55■■□□□ 1.04
DNMT1-212ENST00000587197 KLRG1Q96E93 195 aa21.55■■□□□ 1.04
DNMT1-212ENST00000587197 MINPP1Q9UNW1 487 aa21.55■■□□□ 1.04
DNMT1-212ENST00000587197 G3V3G9 751 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 RFX5P48382 616 aaPredicted RBP21.54■■□□□ 1.04
DNMT1-212ENST00000587197 SCNN1DP51172 638 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 HTRA3P83110 453 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 DCAF8Q5TAQ9 597 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 ZC3H12CQ9C0D7 883 aaKnown RBP21.54■■□□□ 1.04
DNMT1-212ENST00000587197 ZBTB40Q9NUA8 1239 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 POLLQ9UGP5 575 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 GGA1Q9UJY5 639 aa21.54■■□□□ 1.04
DNMT1-212ENST00000587197 RIMBP2O15034 1052 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 EPS15P42566 896 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 LDHAL6AQ6ZMR3 332 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 USP50Q70EL3 339 aaPredicted RBP21.53■■□□□ 1.04
DNMT1-212ENST00000587197 TBC1D16Q8TBP0 767 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 FBXO3Q9UK99 471 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 XDHP47989 1333 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 DUOX1Q9NRD9 1551 aa21.53■■□□□ 1.04
DNMT1-212ENST00000587197 RAD17O75943 681 aa21.52■■□□□ 1.04
DNMT1-212ENST00000587197 PTPN12Q05209 780 aaKnown RBP21.52■■□□□ 1.04
DNMT1-212ENST00000587197 ZNF594Q96JF6 807 aaPredicted RBP21.52■■□□□ 1.04
DNMT1-212ENST00000587197 ANKRD2Q9GZV1 360 aa21.52■■□□□ 1.04
DNMT1-212ENST00000587197 CREBZFQ9NS37 354 aa21.52■■□□□ 1.04
DNMT1-212ENST00000587197 GPRC5DQ9NZD1 345 aa21.52■■□□□ 1.04
DNMT1-212ENST00000587197 UFL1O94874 794 aa21.51■■□□□ 1.03
DNMT1-212ENST00000587197 CNTROBQ8N137 903 aa21.51■■□□□ 1.03
DNMT1-212ENST00000587197 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
DNMT1-212ENST00000587197 ADARB2Q9NS39 739 aaKnown RBP21.51■■□□□ 1.03
DNMT1-212ENST00000587197 RIPOR2Q9Y4F9 1068 aa21.51■■□□□ 1.03
DNMT1-212ENST00000587197 SRGAP3O43295 1099 aa21.5■■□□□ 1.03
DNMT1-212ENST00000587197 ATP2B4P23634 1241 aa21.5■■□□□ 1.03
DNMT1-212ENST00000587197 GMPSP49915 693 aaPredicted RBP21.5■■□□□ 1.03
DNMT1-212ENST00000587197 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
DNMT1-212ENST00000587197 CHRNDQ07001 517 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms