RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 PSMD14O00487 310 aa18.05■□□□□ 0.48
HDAC5-203ENST00000586339 FOXN1O15353 648 aa18.05■□□□□ 0.48
HDAC5-203ENST00000586339 ECE2O60344 883 aa18.05■□□□□ 0.48
HDAC5-203ENST00000586339 ECE1P42892 770 aa18.05■□□□□ 0.48
HDAC5-203ENST00000586339 MICALL2Q8IY33 904 aa18.05■□□□□ 0.48
HDAC5-203ENST00000586339 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
HDAC5-203ENST00000586339 RTL9Q8NET4 1388 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 RIMBP2O15034 1052 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 CTCFP49711 727 aaPredicted RBP18.04■□□□□ 0.48
HDAC5-203ENST00000586339 CTSWP56202 376 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
HDAC5-203ENST00000586339 CST9Q5W186 159 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 TRPM4Q8TD43 1214 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 CDC5LQ99459 802 aaKnown RBP18.04■□□□□ 0.48
HDAC5-203ENST00000586339 ZC3H12CQ9C0D7 883 aaKnown RBP18.04■□□□□ 0.48
HDAC5-203ENST00000586339 ANKIB1Q9P2G1 1089 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 GGA1Q9UJY5 639 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 TLL2Q9Y6L7 1015 aa18.04■□□□□ 0.48
HDAC5-203ENST00000586339 XDHP47989 1333 aa18.03■□□□□ 0.48
HDAC5-203ENST00000586339 UFL1O94874 794 aa18.03■□□□□ 0.48
HDAC5-203ENST00000586339 HIRAP54198 1017 aaPredicted RBP18.03■□□□□ 0.48
HDAC5-203ENST00000586339 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.481e-7■■□□□ 12.1
HDAC5-203ENST00000586339 CDC37L1Q7L3B6 337 aa18.03■□□□□ 0.48
HDAC5-203ENST00000586339 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
HDAC5-203ENST00000586339 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
HDAC5-203ENST00000586339 NEURL1BA8MQ27 555 aa18.02■□□□□ 0.48
HDAC5-203ENST00000586339 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
HDAC5-203ENST00000586339 HHIPL1Q96JK4 782 aa18.02■□□□□ 0.48
HDAC5-203ENST00000586339 CAPNS2Q96L46 248 aa18.02■□□□□ 0.48
HDAC5-203ENST00000586339 CELF2O95319 508 aaKnown RBP18.01■□□□□ 0.47
HDAC5-203ENST00000586339 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
HDAC5-203ENST00000586339 VIL1P09327 827 aaKnown RBP18.01■□□□□ 0.47
HDAC5-203ENST00000586339 FLIIQ13045 1269 aa18.01■□□□□ 0.47
HDAC5-203ENST00000586339 JARID2Q92833 1246 aaPredicted RBP18.01■□□□□ 0.47
HDAC5-203ENST00000586339 GLIS2Q9BZE0 524 aaPredicted RBP18.01■□□□□ 0.47
HDAC5-203ENST00000586339 SHTN1A0MZ66 631 aa18■□□□□ 0.47
HDAC5-203ENST00000586339 ATP2B4P23634 1241 aa18■□□□□ 0.47
HDAC5-203ENST00000586339 DOK7Q18PE1 504 aa18■□□□□ 0.47
HDAC5-203ENST00000586339 CWF19L2Q2TBE0 894 aaKnown RBP18■□□□□ 0.47
HDAC5-203ENST00000586339 PAXIP1Q6ZW49 1069 aaPredicted RBP18■□□□□ 0.47
HDAC5-203ENST00000586339 G2E3Q7L622 706 aa18■□□□□ 0.47
HDAC5-203ENST00000586339 SAPCD2Q86UD0 394 aa18■□□□□ 0.47
HDAC5-203ENST00000586339 TTLL11Q8NHH1 800 aa18■□□□□ 0.47
HDAC5-203ENST00000586339 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
HDAC5-203ENST00000586339 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
HDAC5-203ENST00000586339 ZNF646O15015 1829 aaPredicted RBP18■□□□□ 0.47
HDAC5-203ENST00000586339 G3V3G9 751 aa17.99■□□□□ 0.47
HDAC5-203ENST00000586339 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
HDAC5-203ENST00000586339 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
HDAC5-203ENST00000586339 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
HDAC5-203ENST00000586339 BSDC1Q9NW68 430 aaPredicted RBP17.99■□□□□ 0.47
HDAC5-203ENST00000586339 H7C1W4 665 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 MAP2K2P36507 400 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 CYP4F22Q6NT55 531 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 AGBL3Q8NEM8 1001 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 DNAAF4Q8WXU2 420 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 GREM2Q9H772 168 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 KCNQ5Q9NR82 932 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 MED23Q9ULK4 1368 aa17.98■□□□□ 0.47
HDAC5-203ENST00000586339 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
HDAC5-203ENST00000586339 GCKRQ14397 625 aa17.97■□□□□ 0.47
HDAC5-203ENST00000586339 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
HDAC5-203ENST00000586339 LINS1Q8NG48 757 aa17.97■□□□□ 0.47
HDAC5-203ENST00000586339 A0A1B0GUL6 1792 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 VAMP4O75379 141 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 HSPA8P11142 646 aaKnown RBP17.96■□□□□ 0.47
HDAC5-203ENST00000586339 KIF4BQ2VIQ3 1234 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 RSBN1LQ6PCB5 846 aaPredicted RBP17.96■□□□□ 0.47
HDAC5-203ENST00000586339 KRT26Q7Z3Y9 468 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 PODNQ7Z5L7 613 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 BEGAINQ9BUH8 593 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
HDAC5-203ENST00000586339 EGFRP00533 1210 aa17.95■□□□□ 0.46
HDAC5-203ENST00000586339 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
HDAC5-203ENST00000586339 LBX1P52954 281 aa17.95■□□□□ 0.46
HDAC5-203ENST00000586339 ZNF280AP59817 542 aaPredicted RBP17.95■□□□□ 0.46
HDAC5-203ENST00000586339 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
HDAC5-203ENST00000586339 DCPSQ96C86 337 aaKnown RBP17.95■□□□□ 0.46
HDAC5-203ENST00000586339 CASP7P55210 303 aa17.94■□□□□ 0.46
HDAC5-203ENST00000586339 USP17L3A6NCW0 530 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 USP17L4A6NCW7 530 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 CA12O43570 354 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 CCT4P50991 539 aaKnown RBP17.93■□□□□ 0.46
HDAC5-203ENST00000586339 EXOSC9Q06265 439 aaKnown RBP17.93■□□□□ 0.46
HDAC5-203ENST00000586339 GRM1Q13255 1194 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 USP17L1Q7RTZ2 530 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 GMLQ99445 158 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 LEMD3Q9Y2U8 911 aa17.93■□□□□ 0.46
HDAC5-203ENST00000586339 AKAP11Q9UKA4 1901 aa17.92■□□□□ 0.46
HDAC5-203ENST00000586339 CAPN15O75808 1086 aa17.92■□□□□ 0.46
HDAC5-203ENST00000586339 CSF1RP07333 972 aa17.92■□□□□ 0.46
HDAC5-203ENST00000586339 ITGA6P23229 1130 aa17.92■□□□□ 0.46
HDAC5-203ENST00000586339 RBM26Q5T8P6 1007 aaKnown RBP17.92■□□□□ 0.46
HDAC5-203ENST00000586339 SULF1Q8IWU6 871 aa17.92■□□□□ 0.46
HDAC5-203ENST00000586339 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms