RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 XDHP47989 1333 aa27.36■■□□□ 1.97
R3HDM4-202ENST00000586080 NBPF7P0C2Y1 421 aaPredicted RBP27.35■■□□□ 1.97
R3HDM4-202ENST00000586080 IFIT5Q13325 482 aaKnown RBP27.35■■□□□ 1.97
R3HDM4-202ENST00000586080 SUCLG2Q96I99 432 aa27.35■■□□□ 1.97
R3HDM4-202ENST00000586080 API5Q9BZZ5 524 aaKnown RBP27.35■■□□□ 1.97
R3HDM4-202ENST00000586080 KIF16BQ96L93 1317 aa27.35■■□□□ 1.97
R3HDM4-202ENST00000586080 MYH3P11055 1940 aa27.34■■□□□ 1.97
R3HDM4-202ENST00000586080 BRPF1P55201 1214 aaPredicted RBP27.33■■□□□ 1.97
R3HDM4-202ENST00000586080 DBNDD1Q9H9R9 158 aa27.33■■□□□ 1.97
R3HDM4-202ENST00000586080 HACL1Q9UJ83 578 aa27.33■■□□□ 1.97
R3HDM4-202ENST00000586080 MINPP1Q9UNW1 487 aa27.33■■□□□ 1.97
R3HDM4-202ENST00000586080 RAD17O75943 681 aa27.32■■□□□ 1.96
R3HDM4-202ENST00000586080 CCDC57Q2TAC2 916 aa27.32■■□□□ 1.96
R3HDM4-202ENST00000586080 TAF7LQ5H9L4 462 aa27.32■■□□□ 1.96
R3HDM4-202ENST00000586080 ZC3H12CQ9C0D7 883 aaKnown RBP27.32■■□□□ 1.96
R3HDM4-202ENST00000586080 G3V3G9 751 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 ATP2B4P23634 1241 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 CCT4P50991 539 aaKnown RBP27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 CXCL9Q07325 125 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 DOK7Q18PE1 504 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 DCAF8Q5TAQ9 597 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 CIAPIN1Q6FI81 312 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 SMC1BQ8NDV3 1235 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 UTYO14607 1347 aa27.31■■□□□ 1.96
R3HDM4-202ENST00000586080 LMOD1P29536 600 aaPredicted RBP27.3■■□□□ 1.96
R3HDM4-202ENST00000586080 FSTL1Q12841 308 aa27.3■■□□□ 1.96
R3HDM4-202ENST00000586080 FRAT1Q92837 279 aaPredicted RBP27.3■■□□□ 1.96
R3HDM4-202ENST00000586080 TAF1DQ9H5J8 278 aaPredicted RBP27.3■■□□□ 1.96
R3HDM4-202ENST00000586080 YDJCA8MPS7 323 aa27.29■■□□□ 1.96
R3HDM4-202ENST00000586080 ECE2O60344 883 aa27.29■■□□□ 1.96
R3HDM4-202ENST00000586080 BCAR3O75815 825 aa27.29■■□□□ 1.96
R3HDM4-202ENST00000586080 EAPPQ56P03 285 aaPredicted RBP27.29■■□□□ 1.96
R3HDM4-202ENST00000586080 BICC1Q9H694 974 aaKnown RBP27.29■■□□□ 1.96
R3HDM4-202ENST00000586080 LTBP1Q14766 1721 aa27.29■■□□□ 1.96
R3HDM4-202ENST00000586080 HSPA6P17066 643 aa27.28■■□□□ 1.96
R3HDM4-202ENST00000586080 EPHX2P34913 555 aa27.28■■□□□ 1.96
R3HDM4-202ENST00000586080 POTEIP0CG38 1075 aa27.27■■□□□ 1.96
R3HDM4-202ENST00000586080 POTEJP0CG39 1038 aa27.27■■□□□ 1.96
R3HDM4-202ENST00000586080 TNIP1Q15025 636 aa27.27■■□□□ 1.96
R3HDM4-202ENST00000586080 KAZALD1Q96I82 304 aa27.27■■□□□ 1.96
R3HDM4-202ENST00000586080 ZNF594Q96JF6 807 aaPredicted RBP27.27■■□□□ 1.96
R3HDM4-202ENST00000586080 USP44Q9H0E7 712 aa27.27■■□□□ 1.96
R3HDM4-202ENST00000586080 SPEF2Q9C093 1822 aa27.26■■□□□ 1.95
R3HDM4-202ENST00000586080 IPO8O15397 1037 aaKnown RBP27.26■■□□□ 1.95
R3HDM4-202ENST00000586080 SCNN1DP51172 638 aa27.26■■□□□ 1.95
R3HDM4-202ENST00000586080 ANKRD2Q9GZV1 360 aa27.26■■□□□ 1.95
R3HDM4-202ENST00000586080 WTIPA6NIX2 430 aaPredicted RBP27.25■■□□□ 1.95
R3HDM4-202ENST00000586080 KCNJ4P48050 445 aa27.25■■□□□ 1.95
R3HDM4-202ENST00000586080 CHRNDQ07001 517 aa27.25■■□□□ 1.95
R3HDM4-202ENST00000586080 ARHGAP45Q92619 1136 aa27.25■■□□□ 1.95
R3HDM4-202ENST00000586080 GMPSP49915 693 aaPredicted RBP27.24■■□□□ 1.95
R3HDM4-202ENST00000586080 CNNM1Q9NRU3 951 aa27.24■■□□□ 1.95
R3HDM4-202ENST00000586080 CLEC11AQ9Y240 323 aa27.24■■□□□ 1.95
R3HDM4-202ENST00000586080 UBTFL1P0CB47 393 aaPredicted RBP27.23■■□□□ 1.95
R3HDM4-202ENST00000586080 EPS15P42566 896 aa27.23■■□□□ 1.95
R3HDM4-202ENST00000586080 LDHAL6AQ6ZMR3 332 aa27.23■■□□□ 1.95
R3HDM4-202ENST00000586080 ANKRD44Q8N8A2 993 aa27.23■■□□□ 1.95
R3HDM4-202ENST00000586080 LEMD3Q9Y2U8 911 aa27.23■■□□□ 1.95
R3HDM4-202ENST00000586080 PSMD14O00487 310 aa27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 CHADLQ6NUI6 762 aa27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 PNMA8AQ86V59 439 aaPredicted RBP27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 LDHDQ86WU2 507 aa27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 HELBQ8NG08 1087 aaPredicted RBP27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 KCNQ5Q9NR82 932 aa27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 MED23Q9ULK4 1368 aa27.22■■□□□ 1.95
R3HDM4-202ENST00000586080 ZNF804BA4D1E1 1349 aa27.21■■□□□ 1.95
R3HDM4-202ENST00000586080 SCN4AP35499 1836 aa27.21■■□□□ 1.95
R3HDM4-202ENST00000586080 TRIM27P14373 513 aa27.21■■□□□ 1.95
R3HDM4-202ENST00000586080 RABL6Q3YEC7 729 aaPredicted RBP27.21■■□□□ 1.95
R3HDM4-202ENST00000586080 ATF7IPQ6VMQ6 1270 aa27.21■■□□□ 1.95
R3HDM4-202ENST00000586080 TNNQ9UQP3 1299 aa27.21■■□□□ 1.95
R3HDM4-202ENST00000586080 PLIN1O60240 522 aa27.2■■□□□ 1.94
R3HDM4-202ENST00000586080 TAF5LO75529 589 aa27.2■■□□□ 1.94
R3HDM4-202ENST00000586080 CLUAP1Q96AJ1 413 aa27.2■■□□□ 1.94
R3HDM4-202ENST00000586080 GPRC5DQ9NZD1 345 aa27.2■■□□□ 1.94
R3HDM4-202ENST00000586080 ZBTB12Q9Y330 459 aaPredicted RBP27.2■■□□□ 1.94
R3HDM4-202ENST00000586080 KLRK1P26718 216 aa27.18■■□□□ 1.94
R3HDM4-202ENST00000586080 APLP1P51693 650 aa27.18■■□□□ 1.94
R3HDM4-202ENST00000586080 ZKSCAN2Q63HK3 967 aa27.18■■□□□ 1.94
R3HDM4-202ENST00000586080 SNAP23O00161 211 aa27.17■■□□□ 1.94
R3HDM4-202ENST00000586080 INTS3Q68E01 1043 aaKnown RBP27.17■■□□□ 1.94
R3HDM4-202ENST00000586080 MEIS3Q99687 375 aa27.17■■□□□ 1.94
R3HDM4-202ENST00000586080 PUS3Q9BZE2 481 aaKnown RBP27.17■■□□□ 1.94
R3HDM4-202ENST00000586080 ADARB2Q9NS39 739 aaKnown RBP27.17■■□□□ 1.94
R3HDM4-202ENST00000586080 TXNRD3Q86VQ6 643 aa27.16■■□□□ 1.94
R3HDM4-202ENST00000586080 FBXW7Q969H0 707 aa27.16■■□□□ 1.94
R3HDM4-202ENST00000586080 USP50Q70EL3 339 aaPredicted RBP27.15■■□□□ 1.94
R3HDM4-202ENST00000586080 MICALL2Q8IY33 904 aa27.15■■□□□ 1.94
R3HDM4-202ENST00000586080 CNOT7Q9UIV1 285 aaKnown RBP27.15■■□□□ 1.94
R3HDM4-202ENST00000586080 HDAC5Q9UQL6 1122 aa27.15■■□□□ 1.94
R3HDM4-202ENST00000586080 LRRFIP2Q9Y608 721 aaKnown RBP27.15■■□□□ 1.94
R3HDM4-202ENST00000586080 SHTN1A0MZ66 631 aa27.14■■□□□ 1.94
R3HDM4-202ENST00000586080 PODNQ7Z5L7 613 aa27.14■■□□□ 1.94
R3HDM4-202ENST00000586080 KLHDC4Q8TBB5 520 aa27.14■■□□□ 1.94
R3HDM4-202ENST00000586080 COA1Q9GZY4 146 aa27.14■■□□□ 1.94
R3HDM4-202ENST00000586080 H7C1D1 291 aa27.13■■□□□ 1.93
R3HDM4-202ENST00000586080 RPS12P25398 132 aaKnown RBP27.13■■□□□ 1.93
R3HDM4-202ENST00000586080 MAP1SQ66K74 1059 aaPredicted RBP27.13■■□□□ 1.93
R3HDM4-202ENST00000586080 FTSJ3Q8IY81 847 aaKnown RBP27.13■■□□□ 1.93
R3HDM4-202ENST00000586080 USP17L3A6NCW0 530 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 804.2 ms