RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ZNF609O15014 1411 aa12.56□□□□□ -0.4
SKA2-208ENST00000583927 TNIP1Q15025 636 aa12.56□□□□□ -0.4
SKA2-208ENST00000583927 SSH1Q8WYL5 1049 aa12.56□□□□□ -0.4
SKA2-208ENST00000583927 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
SKA2-208ENST00000583927 UTYO14607 1347 aa12.56□□□□□ -0.4
SKA2-208ENST00000583927 YDJCA8MPS7 323 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 GRM8O00222 908 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 LMOD1P29536 600 aaPredicted RBP12.55□□□□□ -0.4
SKA2-208ENST00000583927 CIAPIN1Q6FI81 312 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 USP50Q70EL3 339 aaPredicted RBP12.55□□□□□ -0.4
SKA2-208ENST00000583927 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
SKA2-208ENST00000583927 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 ITGA6P23229 1130 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 FOXO4P98177 505 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 MIER1Q8N108 512 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 DPF2Q92785 391 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
SKA2-208ENST00000583927 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
SKA2-208ENST00000583927 UFL1O94874 794 aa12.53□□□□□ -0.4
SKA2-208ENST00000583927 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
SKA2-208ENST00000583927 RPS12P25398 132 aaKnown RBP12.53□□□□□ -0.4
SKA2-208ENST00000583927 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
SKA2-208ENST00000583927 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
SKA2-208ENST00000583927 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
SKA2-208ENST00000583927 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
SKA2-208ENST00000583927 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
SKA2-208ENST00000583927 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
SKA2-208ENST00000583927 MED23Q9ULK4 1368 aa12.53□□□□□ -0.4
SKA2-208ENST00000583927 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 ECE2O60344 883 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 EPS15P42566 896 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 SLC4A10Q6U841 1118 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.41
SKA2-208ENST00000583927 RAD17O75943 681 aa12.51□□□□□ -0.41
SKA2-208ENST00000583927 VIL1P09327 827 aaKnown RBP12.51□□□□□ -0.41
SKA2-208ENST00000583927 GMPSP49915 693 aaPredicted RBP12.51□□□□□ -0.41
SKA2-208ENST00000583927 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
SKA2-208ENST00000583927 IFIT5Q13325 482 aaKnown RBP12.51□□□□□ -0.41
SKA2-208ENST00000583927 EAPPQ56P03 285 aaPredicted RBP12.51□□□□□ -0.41
SKA2-208ENST00000583927 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
SKA2-208ENST00000583927 MPHOSPH8Q99549 860 aa12.51□□□□□ -0.41
SKA2-208ENST00000583927 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
SKA2-208ENST00000583927 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
SKA2-208ENST00000583927 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
SKA2-208ENST00000583927 PSMD14O00487 310 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 RABL6Q3YEC7 729 aaPredicted RBP12.5□□□□□ -0.41
SKA2-208ENST00000583927 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 KAZALD1Q96I82 304 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
SKA2-208ENST00000583927 ECM29Q5VYK3 1845 aa12.49□□□□□ -0.41
SKA2-208ENST00000583927 NBPF7P0C2Y1 421 aaPredicted RBP12.49□□□□□ -0.41
SKA2-208ENST00000583927 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
SKA2-208ENST00000583927 EPHA10Q5JZY3 1008 aa12.49□□□□□ -0.41
SKA2-208ENST00000583927 C15orf52Q6ZUT6 534 aaKnown RBP12.49□□□□□ -0.41
SKA2-208ENST00000583927 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
SKA2-208ENST00000583927 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
SKA2-208ENST00000583927 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
SKA2-208ENST00000583927 ZNF804BA4D1E1 1349 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 KIF16BQ96L93 1317 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 H7C1D1 291 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 MMP14P50281 582 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 RARSP54136 660 aaKnown RBP12.48□□□□□ -0.41
SKA2-208ENST00000583927 CHRNDQ07001 517 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 SUCLG2Q96I99 432 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
SKA2-208ENST00000583927 COA1Q9GZY4 146 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
SKA2-208ENST00000583927 MYH13Q9UKX3 1938 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 IRS2Q9Y4H2 1338 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 G3V3G9 751 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 MAP1SQ66K74 1059 aaPredicted RBP12.47□□□□□ -0.41
SKA2-208ENST00000583927 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 GMLQ99445 158 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 API5Q9BZZ5 524 aaKnown RBP12.47□□□□□ -0.41
SKA2-208ENST00000583927 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 ARAP2Q8WZ64 1704 aa12.47□□□□□ -0.41
SKA2-208ENST00000583927 USP17L3A6NCW0 530 aa12.46□□□□□ -0.41
SKA2-208ENST00000583927 USP17L4A6NCW7 530 aa12.46□□□□□ -0.41
SKA2-208ENST00000583927 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
SKA2-208ENST00000583927 HIRAP54198 1017 aaPredicted RBP12.46□□□□□ -0.41
SKA2-208ENST00000583927 ZNF280AP59817 542 aaPredicted RBP12.46□□□□□ -0.41
SKA2-208ENST00000583927 HTRA3P83110 453 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms