RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 PLVAPQ9BX97 442 aa6.91□□□□□ -1.3
VAPA-206ENST00000583475 TUT1Q9H6E5 874 aaKnown RBP6.91□□□□□ -1.3
VAPA-206ENST00000583475 CNTN3Q9P232 1028 aa6.91□□□□□ -1.3
VAPA-206ENST00000583475 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
VAPA-206ENST00000583475 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
VAPA-206ENST00000583475 GRIK5Q16478 980 aa6.9□□□□□ -1.3
VAPA-206ENST00000583475 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.3
VAPA-206ENST00000583475 TTC9Q92623 222 aa6.9□□□□□ -1.3
VAPA-206ENST00000583475 JPH1Q9HDC5 661 aaPredicted RBP6.9□□□□□ -1.3
VAPA-206ENST00000583475 FRRS1LQ9P0K9 344 aa6.9□□□□□ -1.3
VAPA-206ENST00000583475 USP5P45974 858 aa6.89□□□□□ -1.31
VAPA-206ENST00000583475 ELMSAN1Q6PJG2 1045 aa6.89□□□□□ -1.31
VAPA-206ENST00000583475 NSUN5Q96P11 429 aaKnown RBP6.89□□□□□ -1.31
VAPA-206ENST00000583475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.89□□□□□ -1.31
VAPA-206ENST00000583475 SOWAHDA6NJG2 315 aa6.88□□□□□ -1.31
VAPA-206ENST00000583475 GJD3Q8N144 294 aa6.88□□□□□ -1.31
VAPA-206ENST00000583475 KCTD17Q8N5Z5 321 aa6.88□□□□□ -1.31
VAPA-206ENST00000583475 C1orf127Q8N9H9 656 aa6.88□□□□□ -1.31
VAPA-206ENST00000583475 TTC16Q8NEE8 873 aa6.88□□□□□ -1.31
VAPA-206ENST00000583475 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
VAPA-206ENST00000583475 NOP53Q9NZM5 478 aaKnown RBP6.88□□□□□ -1.31
VAPA-206ENST00000583475 KRBA1A5PL33 1030 aa6.87□□□□□ -1.31
VAPA-206ENST00000583475 KIF4AO95239 1232 aa6.87□□□□□ -1.31
VAPA-206ENST00000583475 EIF2AK2P19525 551 aaKnown RBP6.87□□□□□ -1.31
VAPA-206ENST00000583475 HYAL2Q12891 473 aa6.87□□□□□ -1.31
VAPA-206ENST00000583475 ALYREFQ86V81 257 aaKnown RBP6.87□□□□□ -1.31
VAPA-206ENST00000583475 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
VAPA-206ENST00000583475 CHRDQ9H2X0 955 aa6.87□□□□□ -1.31
VAPA-206ENST00000583475 GHRHP01286 108 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 ITGB2P05107 769 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 EHHADHQ08426 723 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 TRAPPC3LQ5T215 181 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 CEP120Q8N960 986 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 SALL4Q9UJQ4 1053 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
VAPA-206ENST00000583475 TNFRSF21O75509 655 aa6.85□□□□□ -1.31
VAPA-206ENST00000583475 CES1P23141 567 aa6.85□□□□□ -1.31
VAPA-206ENST00000583475 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
VAPA-206ENST00000583475 KANSL3Q9P2N6 904 aa6.85□□□□□ -1.31
VAPA-206ENST00000583475 FOXD3Q9UJU5 478 aaPredicted RBP6.85□□□□□ -1.31
VAPA-206ENST00000583475 SPDYE3A6NKU9 549 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 BAG6P46379 1132 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 KCNA1Q09470 495 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
VAPA-206ENST00000583475 PLA2G4EQ3MJ16 856 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 MSL1Q68DK7 614 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 PMEPA1Q969W9 287 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 SPACA7Q96KW9 195 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 CITED4Q96RK1 184 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 RBSNQ9H1K0 784 aa6.84□□□□□ -1.31
VAPA-206ENST00000583475 A0A0A0MRY4 1105 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 EREGO14944 169 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 ATP11AP98196 1134 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 NCAPG2Q86XI2 1143 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 TRIM33Q9UPN9 1127 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
VAPA-206ENST00000583475 NDUFB5O43674 189 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 PHACTR2O75167 634 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 IGHA2P01877 340 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 SPATA31C1P0DKV0 1188 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 GDF6Q6KF10 455 aaPredicted RBP6.82□□□□□ -1.32
VAPA-206ENST00000583475 ADAMTSL4Q6UY14 1074 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 WFDC8Q8IUA0 241 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 ZFYVE28Q9HCC9 887 aa6.82□□□□□ -1.32
VAPA-206ENST00000583475 C1QTNF9BB2RNN3 333 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 NFKBIEO00221 500 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 PDIA4P13667 645 aaKnown RBP6.81□□□□□ -1.32
VAPA-206ENST00000583475 ACPPP15309 386 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 GRIK4Q16099 956 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 CEP135Q66GS9 1140 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 CD163Q86VB7 1156 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 IL22RA1Q8N6P7 574 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
VAPA-206ENST00000583475 DZANK1Q9NVP4 752 aa6.81□□□□□ -1.32
VAPA-206ENST00000583475 TRPA1O75762 1119 aa6.8□□□□□ -1.32
VAPA-206ENST00000583475 SMNDC1O75940 238 aaKnown RBP eCLIP6.8□□□□□ -1.32
VAPA-206ENST00000583475 IGHA1P01876 353 aa6.8□□□□□ -1.32
VAPA-206ENST00000583475 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
VAPA-206ENST00000583475 FMR1NBQ8N0W7 255 aaPredicted RBP6.8□□□□□ -1.32
VAPA-206ENST00000583475 RBCK1Q9BYM8 510 aa6.8□□□□□ -1.32
VAPA-206ENST00000583475 BIN2Q9UBW5 565 aaPredicted RBP6.8□□□□□ -1.32
VAPA-206ENST00000583475 DEAF1O75398 565 aaPredicted RBP6.79□□□□□ -1.32
VAPA-206ENST00000583475 CHRNA4P43681 627 aa6.79□□□□□ -1.32
VAPA-206ENST00000583475 RAC1P63000 192 aa6.79□□□□□ -1.32
VAPA-206ENST00000583475 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
VAPA-206ENST00000583475 FBXO11Q86XK2 927 aa6.79□□□□□ -1.32
VAPA-206ENST00000583475 CACTIN-AS1Q8N1I8 211 aa6.79□□□□□ -1.32
VAPA-206ENST00000583475 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
VAPA-206ENST00000583475 GPR182O15218 404 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 POLR3DP05423 398 aaPredicted RBP6.78□□□□□ -1.32
VAPA-206ENST00000583475 ELNP15502 786 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 SELPP16109 830 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 ORC1Q13415 861 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 PEAR1Q5VY43 1037 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms