RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 RPAP2Q8IXW5 612 aaPredicted RBP19.87■□□□□ 0.77
CCDC57-213ENST00000581625 COPRSQ9NQ92 184 aa19.87■□□□□ 0.77
CCDC57-213ENST00000581625 CNNM1Q9NRU3 951 aa19.87■□□□□ 0.77
CCDC57-213ENST00000581625 PODXL2Q9NZ53 605 aa19.87■□□□□ 0.77
CCDC57-213ENST00000581625 DUOX1Q9NRD9 1551 aa19.87■□□□□ 0.77
CCDC57-213ENST00000581625 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 NFKBIEO00221 500 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 OLFM4Q6UX06 510 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 MPNDQ8N594 471 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 SUPT20HQ8NEM7 779 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 SSH3Q8TE77 659 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 ZNF594Q96JF6 807 aaPredicted RBP19.86■□□□□ 0.77
CCDC57-213ENST00000581625 ANKRD2Q9GZV1 360 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 MINPP1Q9UNW1 487 aa19.86■□□□□ 0.77
CCDC57-213ENST00000581625 MROH5Q6ZUA9 1318 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 HMMRO75330 724 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 CIAO1O76071 339 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 POLA2Q14181 598 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 RTFDC1Q9BY42 306 aaPredicted RBP19.85■□□□□ 0.77
CCDC57-213ENST00000581625 ANKIB1Q9P2G1 1089 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 A0A1B0GUL6 1792 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 UTRNP46939 3433 aa19.85■□□□□ 0.77
CCDC57-213ENST00000581625 EYA2O00167 538 aa19.84■□□□□ 0.77
CCDC57-213ENST00000581625 CHRNDQ07001 517 aa19.84■□□□□ 0.77
CCDC57-213ENST00000581625 SLC51AQ86UW1 340 aa19.84■□□□□ 0.77
CCDC57-213ENST00000581625 KLHDC4Q8TBB5 520 aa19.84■□□□□ 0.77
CCDC57-213ENST00000581625 NSFL1CQ9UNZ2 370 aaKnown RBP19.84■□□□□ 0.77
CCDC57-213ENST00000581625 GPSM2P81274 684 aa19.83■□□□□ 0.77
CCDC57-213ENST00000581625 RASSF7Q02833 373 aa19.83■□□□□ 0.77
CCDC57-213ENST00000581625 VPS33BQ9H267 617 aa19.83■□□□□ 0.77
CCDC57-213ENST00000581625 GGA1Q9UJY5 639 aa19.83■□□□□ 0.77
CCDC57-213ENST00000581625 ATP2B4P23634 1241 aa19.82■□□□□ 0.76
CCDC57-213ENST00000581625 RIPOR2Q9Y4F9 1068 aa19.82■□□□□ 0.76
CCDC57-213ENST00000581625 UFL1O94874 794 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 LMNB1P20700 586 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 IL15P40933 162 aaPredicted RBP19.81■□□□□ 0.76
CCDC57-213ENST00000581625 LRRC24Q50LG9 513 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 TBC1D16Q8TBP0 767 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 EYA3Q99504 573 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 PUS3Q9BZE2 481 aaKnown RBP19.81■□□□□ 0.76
CCDC57-213ENST00000581625 SIL1Q9H173 461 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 PA2G4Q9UQ80 394 aaKnown RBP19.81■□□□□ 0.76
CCDC57-213ENST00000581625 LEMD3Q9Y2U8 911 aa19.81■□□□□ 0.76
CCDC57-213ENST00000581625 MED23Q9ULK4 1368 aa19.8■□□□□ 0.76
CCDC57-213ENST00000581625 C6orf229H3BNL8 230 aa19.79■□□□□ 0.76
CCDC57-213ENST00000581625 IARSP41252 1262 aaKnown RBP19.79■□□□□ 0.76
CCDC57-213ENST00000581625 KCNJ4P48050 445 aa19.79■□□□□ 0.76
CCDC57-213ENST00000581625 ATG9AQ7Z3C6 839 aa19.79■□□□□ 0.76
CCDC57-213ENST00000581625 EXOC6Q8TAG9 804 aa19.79■□□□□ 0.76
CCDC57-213ENST00000581625 POLLQ9UGP5 575 aa19.79■□□□□ 0.76
CCDC57-213ENST00000581625 ZC3H4Q9UPT8 1303 aaKnown RBP19.78■□□□□ 0.76
CCDC57-213ENST00000581625 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
CCDC57-213ENST00000581625 HSP90AB4PQ58FF6 505 aa19.78■□□□□ 0.76
CCDC57-213ENST00000581625 SIRT2Q8IXJ6 389 aa19.78■□□□□ 0.76
CCDC57-213ENST00000581625 VGLL2Q8N8G2 317 aa19.78■□□□□ 0.76
CCDC57-213ENST00000581625 ZNF277Q9NRM2 450 aaPredicted RBP19.78■□□□□ 0.76
CCDC57-213ENST00000581625 NOP58Q9Y2X3 529 aaKnown RBP19.78■□□□□ 0.76
CCDC57-213ENST00000581625 ZNF804BA4D1E1 1349 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 TIAM2Q8IVF5 1701 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 PPIP5K2O43314 1243 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 SURF6O75683 361 aaKnown RBP19.77■□□□□ 0.76
CCDC57-213ENST00000581625 PDE8BO95263 885 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCDC57-213ENST00000581625 WASHC4Q2M389 1173 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 CEP126Q9P2H0 1117 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 SBF1O95248 1867 aa19.77■□□□□ 0.76
CCDC57-213ENST00000581625 IRX6P78412 446 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-213ENST00000581625 OS9Q13438 667 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-213ENST00000581625 UBE4AQ14139 1066 aa19.76■□□□□ 0.75
CCDC57-213ENST00000581625 PUM3Q15397 648 aaKnown RBP19.76■□□□□ 0.75
CCDC57-213ENST00000581625 ERC1Q8IUD2 1116 aa19.76■□□□□ 0.75
CCDC57-213ENST00000581625 HELBQ8NG08 1087 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-213ENST00000581625 CHD4Q14839 1912 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 DICER1Q9UPY3 1922 aaKnown RBP19.75■□□□□ 0.75
CCDC57-213ENST00000581625 TAF5LO75529 589 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 NEFLP07196 543 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 AOC3Q16853 763 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 C9orf131Q5VYM1 1079 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 C15orf52Q6ZUT6 534 aaKnown RBP19.75■□□□□ 0.75
CCDC57-213ENST00000581625 LARGE2Q8N3Y3 721 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 JDP2Q8WYK2 163 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 ZC3H12CQ9C0D7 883 aaKnown RBP19.75■□□□□ 0.75
CCDC57-213ENST00000581625 PCDHB15Q9Y5E8 787 aa19.75■□□□□ 0.75
CCDC57-213ENST00000581625 PRELPP51888 382 aa19.74■□□□□ 0.75
CCDC57-213ENST00000581625 NIM1KQ8IY84 436 aa19.73■□□□□ 0.75
CCDC57-213ENST00000581625 AKAP2Q9Y2D5 859 aa19.73■□□□□ 0.75
CCDC57-213ENST00000581625 COL4A5P29400 1685 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 ZNF609O15014 1411 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 IFIT1P09914 478 aaKnown RBP19.72■□□□□ 0.75
CCDC57-213ENST00000581625 SLC5A1P13866 664 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 FGFR2P21802 821 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 HDAC1Q13547 482 aaPredicted RBP19.72■□□□□ 0.75
CCDC57-213ENST00000581625 ARAP2Q8WZ64 1704 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 LPIN2Q92539 896 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 EXOC6BQ9Y2D4 811 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 IRS2Q9Y4H2 1338 aa19.72■□□□□ 0.75
CCDC57-213ENST00000581625 RAB11FIP3O75154 756 aa19.71■□□□□ 0.75
CCDC57-213ENST00000581625 SASH1O94885 1247 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms