RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
SUPT4H1-204ENST00000580947 ZNF609O15014 1411 aa13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 C6orf229H3BNL8 230 aa13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 MAP1SQ66K74 1059 aaPredicted RBP13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 ANKRD18AQ8IVF6 992 aa13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 KCNQ5Q9NR82 932 aa13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
SUPT4H1-204ENST00000580947 XDHP47989 1333 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 E9PSI1 815 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 ECE2O60344 883 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 UFL1O94874 794 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 LMOD1P29536 600 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 FOXO4P98177 505 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 ADARB2Q9NS39 739 aaKnown RBP13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 BSDC1Q9NW68 430 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
SUPT4H1-204ENST00000580947 PSMD14O00487 310 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 HIRAP54198 1017 aaPredicted RBP13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 TNIP1Q15025 636 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 EYA3Q99504 573 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 PGAP2Q9UHJ9 254 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 GGA1Q9UJY5 639 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 MINPP1Q9UNW1 487 aa13.49□□□□□ -0.25
SUPT4H1-204ENST00000580947 ITGA6P23229 1130 aa13.48□□□□□ -0.25
SUPT4H1-204ENST00000580947 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
SUPT4H1-204ENST00000580947 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
SUPT4H1-204ENST00000580947 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
SUPT4H1-204ENST00000580947 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
SUPT4H1-204ENST00000580947 MED23Q9ULK4 1368 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 GRM8O00222 908 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 ALDH1L1O75891 902 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 IFFO2Q5TF58 517 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 DPF2Q92785 391 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
SUPT4H1-204ENST00000580947 CNTNAP1P78357 1384 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 UTYO14607 1347 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 TMEM88BA6NKF7 163 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 EGFRP00533 1210 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 ATP2B4P23634 1241 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-204ENST00000580947 TRAF5O00463 557 aa13.45□□□□□ -0.26
SUPT4H1-204ENST00000580947 RPS12P25398 132 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-204ENST00000580947 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-204ENST00000580947 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
SUPT4H1-204ENST00000580947 GMLQ99445 158 aa13.45□□□□□ -0.26
SUPT4H1-204ENST00000580947 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
SUPT4H1-204ENST00000580947 ARAP2Q8WZ64 1704 aa13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 PTPRCP08575 1304 aa13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 KLRK1P26718 216 aa13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 CST9Q5W186 159 aa13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 MKRN1Q9UHC7 482 aaKnown RBP13.44□□□□□ -0.26
SUPT4H1-204ENST00000580947 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 NBPF7P0C2Y1 421 aaPredicted RBP13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 LMBR1LQ6UX01 489 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 LEMD3Q9Y2U8 911 aa13.43□□□□□ -0.26
SUPT4H1-204ENST00000580947 ZNF804BA4D1E1 1349 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 H7C1D1 291 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 ZNF280AP59817 542 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 CHRNDQ07001 517 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 PODNQ7Z5L7 613 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 GLIS2Q9BZE0 524 aaPredicted RBP13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
SUPT4H1-204ENST00000580947 SNAP23O00161 211 aa13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 VEGFBP49765 207 aa13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 IFIT5Q13325 482 aaKnown RBP13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 RABL6Q3YEC7 729 aaPredicted RBP13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 DACT2Q5SW24 774 aa13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 C15orf52Q6ZUT6 534 aaKnown RBP13.41□□□□□ -0.26
SUPT4H1-204ENST00000580947 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms