RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 UTYO14607 1347 aa15.29■□□□□ 0.04
CCDC84-209ENST00000580556 NTSR2O95665 410 aa15.29■□□□□ 0.04
CCDC84-209ENST00000580556 RLBP1P12271 317 aa15.29■□□□□ 0.04
CCDC84-209ENST00000580556 TPTE2Q6XPS3 522 aa15.29■□□□□ 0.04
CCDC84-209ENST00000580556 TMEM57Q8N5G2 664 aa15.29■□□□□ 0.04
CCDC84-209ENST00000580556 JDP2Q8WYK2 163 aa15.29■□□□□ 0.04
CCDC84-209ENST00000580556 TNRC18O15417 2968 aaPredicted RBP15.29■□□□□ 0.04
CCDC84-209ENST00000580556 LMOD1P29536 600 aaPredicted RBP15.28■□□□□ 0.04
CCDC84-209ENST00000580556 EIF6P56537 245 aaKnown RBP15.28■□□□□ 0.04
CCDC84-209ENST00000580556 SUSD4Q5VX71 490 aa15.28■□□□□ 0.04
CCDC84-209ENST00000580556 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
CCDC84-209ENST00000580556 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
CCDC84-209ENST00000580556 UTP14AQ9BVJ6 771 aaKnown RBP15.28■□□□□ 0.04
CCDC84-209ENST00000580556 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
CCDC84-209ENST00000580556 GRM8O00222 908 aa15.27■□□□□ 0.04
CCDC84-209ENST00000580556 PCCAP05165 728 aaPredicted RBP15.27■□□□□ 0.04
CCDC84-209ENST00000580556 ALDH1B1P30837 517 aa15.27■□□□□ 0.04
CCDC84-209ENST00000580556 MVPQ14764 893 aaKnown RBP15.27■□□□□ 0.04
CCDC84-209ENST00000580556 PSMD1Q99460 953 aa15.27■□□□□ 0.04
CCDC84-209ENST00000580556 LAMB2P55268 1798 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 H7C1W4 665 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
CCDC84-209ENST00000580556 MAP2K2P36507 400 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 DGKZQ13574 1117 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
CCDC84-209ENST00000580556 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
CCDC84-209ENST00000580556 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
CCDC84-209ENST00000580556 CASP7P55210 303 aa15.25■□□□□ 0.03
CCDC84-209ENST00000580556 USP50Q70EL3 339 aaPredicted RBP15.25■□□□□ 0.03
CCDC84-209ENST00000580556 SAPCD2Q86UD0 394 aa15.25■□□□□ 0.03
CCDC84-209ENST00000580556 ZIC5Q96T25 663 aa15.25■□□□□ 0.03
CCDC84-209ENST00000580556 USP44Q9H0E7 712 aa15.25■□□□□ 0.03
CCDC84-209ENST00000580556 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
CCDC84-209ENST00000580556 HDAC5Q9UQL6 1122 aa15.25■□□□□ 0.03
CCDC84-209ENST00000580556 CELF2O95319 508 aaKnown RBP15.24■□□□□ 0.03
CCDC84-209ENST00000580556 GNAI3P08754 354 aa15.24■□□□□ 0.03
CCDC84-209ENST00000580556 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
CCDC84-209ENST00000580556 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
CCDC84-209ENST00000580556 GLIS2Q9BZE0 524 aaPredicted RBP15.24■□□□□ 0.03
CCDC84-209ENST00000580556 COG6Q9Y2V7 657 aa15.24■□□□□ 0.03
CCDC84-209ENST00000580556 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
CCDC84-209ENST00000580556 CRY2Q49AN0 593 aa15.23■□□□□ 0.03
CCDC84-209ENST00000580556 CIAPIN1Q6FI81 312 aa15.23■□□□□ 0.03
CCDC84-209ENST00000580556 UBE3BQ7Z3V4 1068 aa15.23■□□□□ 0.03
CCDC84-209ENST00000580556 FAM89AQ96GI7 184 aa15.23■□□□□ 0.03
CCDC84-209ENST00000580556 PLA2G12BQ9BX93 195 aa15.23■□□□□ 0.03
CCDC84-209ENST00000580556 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
CCDC84-209ENST00000580556 ZBTB7BO15156 539 aaPredicted RBP15.22■□□□□ 0.03
CCDC84-209ENST00000580556 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
CCDC84-209ENST00000580556 UBTFL1P0CB47 393 aaPredicted RBP15.22■□□□□ 0.03
CCDC84-209ENST00000580556 AAMPQ13685 434 aa15.22■□□□□ 0.03
CCDC84-209ENST00000580556 MEIS3Q99687 375 aa15.22■□□□□ 0.03
CCDC84-209ENST00000580556 ZNF408Q9H9D4 720 aa15.22■□□□□ 0.03
CCDC84-209ENST00000580556 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
CCDC84-209ENST00000580556 DLK2Q6UY11 383 aa15.21■□□□□ 0.03
CCDC84-209ENST00000580556 GPRC5DQ9NZD1 345 aa15.21■□□□□ 0.03
CCDC84-209ENST00000580556 PDE4DIPQ5VU43 2346 aa15.21■□□□□ 0.02
CCDC84-209ENST00000580556 PDE8AO60658 829 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 SOX10P56693 466 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 AOC3Q16853 763 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 C3orf67Q6ZVT6 689 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 NIM1KQ8IY84 436 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 ADARB2Q9NS39 739 aaKnown RBP15.2■□□□□ 0.02
CCDC84-209ENST00000580556 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
CCDC84-209ENST00000580556 PPIP5K2O43314 1243 aa15.19■□□□□ 0.02
CCDC84-209ENST00000580556 CA12O43570 354 aa15.19■□□□□ 0.02
CCDC84-209ENST00000580556 GNAI2P04899 355 aa15.19■□□□□ 0.02
CCDC84-209ENST00000580556 HIRAP54198 1017 aaPredicted RBP15.19■□□□□ 0.02
CCDC84-209ENST00000580556 CXCL9Q07325 125 aa15.19■□□□□ 0.02
CCDC84-209ENST00000580556 RPGRQ92834 1020 aaKnown RBP15.19■□□□□ 0.02
CCDC84-209ENST00000580556 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
CCDC84-209ENST00000580556 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
CCDC84-209ENST00000580556 PPEF1O14829 653 aaPredicted RBP15.18■□□□□ 0.02
CCDC84-209ENST00000580556 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
CCDC84-209ENST00000580556 HOXA10P31260 410 aaPredicted RBP15.18■□□□□ 0.02
CCDC84-209ENST00000580556 GMPSP49915 693 aaPredicted RBP15.18■□□□□ 0.02
CCDC84-209ENST00000580556 CTSWP56202 376 aa15.18■□□□□ 0.02
CCDC84-209ENST00000580556 RABL6Q3YEC7 729 aaPredicted RBP15.18■□□□□ 0.02
CCDC84-209ENST00000580556 RTL5Q5HYW3 569 aaPredicted RBP15.18■□□□□ 0.02
CCDC84-209ENST00000580556 KAZALD1Q96I82 304 aa15.18■□□□□ 0.02
CCDC84-209ENST00000580556 SUCLG2Q96I99 432 aa15.18■□□□□ 0.02
CCDC84-209ENST00000580556 NLRP3Q96P20 1036 aa15.18■□□□□ 0.02
CCDC84-209ENST00000580556 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
CCDC84-209ENST00000580556 CSF1RP07333 972 aa15.17■□□□□ 0.02
CCDC84-209ENST00000580556 FOXO4P98177 505 aa15.17■□□□□ 0.02
CCDC84-209ENST00000580556 MTX1Q13505 466 aa15.17■□□□□ 0.02
CCDC84-209ENST00000580556 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
CCDC84-209ENST00000580556 TRPM4Q8TD43 1214 aa15.17■□□□□ 0.02
CCDC84-209ENST00000580556 JARID2Q92833 1246 aaPredicted RBP15.17■□□□□ 0.02
CCDC84-209ENST00000580556 HHIPL1Q96JK4 782 aa15.17■□□□□ 0.02
CCDC84-209ENST00000580556 LRRFIP2Q9Y608 721 aaKnown RBP15.17■□□□□ 0.02
CCDC84-209ENST00000580556 MYH3P11055 1940 aa15.17■□□□□ 0.02
CCDC84-209ENST00000580556 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
CCDC84-209ENST00000580556 ANKRD44Q8N8A2 993 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms