RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 PSMD14O00487 310 aa22.41■■□□□ 1.18
SLC9A3R1-203ENST00000578958 ECE2O60344 883 aa22.41■■□□□ 1.18
SLC9A3R1-203ENST00000578958 CTSWP56202 376 aa22.41■■□□□ 1.18
SLC9A3R1-203ENST00000578958 FLIIQ13045 1269 aa22.41■■□□□ 1.18
SLC9A3R1-203ENST00000578958 CWF19L2Q2TBE0 894 aaKnown RBP22.41■■□□□ 1.18
SLC9A3R1-203ENST00000578958 GPR101Q96P66 508 aaPredicted RBP22.41■■□□□ 1.18
SLC9A3R1-203ENST00000578958 NEURL1BA8MQ27 555 aa22.4■■□□□ 1.18
SLC9A3R1-203ENST00000578958 MICALL2Q8IY33 904 aa22.4■■□□□ 1.18
SLC9A3R1-203ENST00000578958 PODXL2Q9NZ53 605 aa22.4■■□□□ 1.18
SLC9A3R1-203ENST00000578958 ZBTB12Q9Y330 459 aaPredicted RBP22.4■■□□□ 1.18
SLC9A3R1-203ENST00000578958 DUOX1Q9NRD9 1551 aa22.4■■□□□ 1.18
SLC9A3R1-203ENST00000578958 TRAF5O00463 557 aa22.39■■□□□ 1.17
SLC9A3R1-203ENST00000578958 ZC3H15Q8WU90 426 aaKnown RBP22.39■■□□□ 1.17
SLC9A3R1-203ENST00000578958 DPF2Q92785 391 aa22.39■■□□□ 1.17
SLC9A3R1-203ENST00000578958 MYH16Q9H6N6 1097 aa22.39■■□□□ 1.17
SLC9A3R1-203ENST00000578958 RASSF10A6NK89 507 aa22.38■■□□□ 1.17
SLC9A3R1-203ENST00000578958 RPS12P25398 132 aaKnown RBP22.38■■□□□ 1.17
SLC9A3R1-203ENST00000578958 EXOSC9Q06265 439 aaKnown RBP22.38■■□□□ 1.17
SLC9A3R1-203ENST00000578958 UBE3BQ7Z3V4 1068 aa22.38■■□□□ 1.17
SLC9A3R1-203ENST00000578958 XDHP47989 1333 aa22.37■■□□□ 1.17
SLC9A3R1-203ENST00000578958 FMR1Q06787 632 aaKnown RBP eCLIP22.37■■□□□ 1.17
SLC9A3R1-203ENST00000578958 TNS4Q8IZW8 715 aa22.37■■□□□ 1.17
SLC9A3R1-203ENST00000578958 TTLL11Q8NHH1 800 aa22.37■■□□□ 1.17
SLC9A3R1-203ENST00000578958 DNAAF4Q8WXU2 420 aa22.37■■□□□ 1.17
SLC9A3R1-203ENST00000578958 VAMP4O75379 141 aa22.36■■□□□ 1.17
SLC9A3R1-203ENST00000578958 ATP2B4P23634 1241 aa22.36■■□□□ 1.17
SLC9A3R1-203ENST00000578958 GRM1Q13255 1194 aa22.36■■□□□ 1.17
SLC9A3R1-203ENST00000578958 TRPM4Q8TD43 1214 aa22.36■■□□□ 1.17
SLC9A3R1-203ENST00000578958 WDR33Q9C0J8 1336 aaKnown RBP22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 CELF2O95319 508 aaKnown RBP22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 IGHMBP2P38935 993 aaKnown RBP22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 ECE1P42892 770 aa22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 GCKRQ14397 625 aa22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 RBM26Q5T8P6 1007 aaKnown RBP22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 CDC37L1Q7L3B6 337 aa22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 GLIS2Q9BZE0 524 aaPredicted RBP22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 GREM2Q9H772 168 aa22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 ZNF408Q9H9D4 720 aa22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 COL4A1P02462 1669 aa22.35■■□□□ 1.17
SLC9A3R1-203ENST00000578958 SHTN1A0MZ66 631 aa22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 H7C1W4 665 aa22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 HIRAP54198 1017 aaPredicted RBP22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 TBC1D10BQ4KMP7 808 aaPredicted RBP22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 SAMD7Q7Z3H4 446 aa22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 LINS1Q8NG48 757 aa22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 KCNQ5Q9NR82 932 aa22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 BSDC1Q9NW68 430 aaPredicted RBP22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 PGAP2Q9UHJ9 254 aa22.34■■□□□ 1.17
SLC9A3R1-203ENST00000578958 CST9Q5W186 159 aa22.33■■□□□ 1.17
SLC9A3R1-203ENST00000578958 MAP2K1Q02750 393 aaPredicted RBP22.32■■□□□ 1.16
SLC9A3R1-203ENST00000578958 MPHOSPH8Q99549 860 aa22.32■■□□□ 1.16
SLC9A3R1-203ENST00000578958 RTL9Q8NET4 1388 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 FOXN1O15353 648 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 VIL1P09327 827 aaKnown RBP22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 USP48Q86UV5 1035 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 DCPSQ96C86 337 aaKnown RBP22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CAPNS2Q96L46 248 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 BEGAINQ9BUH8 593 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 TLL2Q9Y6L7 1015 aa22.31■■□□□ 1.16
SLC9A3R1-203ENST00000578958 ITGA6P23229 1130 aa22.3■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CYP4F22Q6NT55 531 aa22.3■■□□□ 1.16
SLC9A3R1-203ENST00000578958 TRPM7Q96QT4 1865 aa22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 KIF4BQ2VIQ3 1234 aa22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 KRT26Q7Z3Y9 468 aa22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 PODNQ7Z5L7 613 aa22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 PLA2G12BQ9BX93 195 aa22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 WBP1LQ9NX94 342 aa22.29■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CCT4P50991 539 aaKnown RBP22.28■■□□□ 1.16
SLC9A3R1-203ENST00000578958 RSBN1LQ6PCB5 846 aaPredicted RBP22.28■■□□□ 1.16
SLC9A3R1-203ENST00000578958 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
SLC9A3R1-203ENST00000578958 ANKRD2Q9GZV1 360 aa22.28■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
SLC9A3R1-203ENST00000578958 MYH3P11055 1940 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 USP17L3A6NCW0 530 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 USP17L4A6NCW7 530 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 F6X3S4 739 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CAPN15O75808 1086 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 KCNJ4P48050 445 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 FAM161AQ3B820 660 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 USP17L1Q7RTZ2 530 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 SAPCD2Q86UD0 394 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 AGBL3Q8NEM8 1001 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 LEMD3Q9Y2U8 911 aa22.27■■□□□ 1.16
SLC9A3R1-203ENST00000578958 CACNA1FO60840 1977 aa22.27■■□□□ 1.15
SLC9A3R1-203ENST00000578958 ANKRD18BA2A2Z9 1011 aa22.26■■□□□ 1.15
SLC9A3R1-203ENST00000578958 SULF1Q8IWU6 871 aa22.26■■□□□ 1.15
SLC9A3R1-203ENST00000578958 MED23Q9ULK4 1368 aa22.25■■□□□ 1.15
SLC9A3R1-203ENST00000578958 EGFRP00533 1210 aa22.25■■□□□ 1.15
SLC9A3R1-203ENST00000578958 IFIT5Q13325 482 aaKnown RBP22.25■■□□□ 1.15
SLC9A3R1-203ENST00000578958 SLC4A10Q6U841 1118 aa22.25■■□□□ 1.15
SLC9A3R1-203ENST00000578958 PRDM10Q9NQV6 1147 aa22.25■■□□□ 1.15
SLC9A3R1-203ENST00000578958 CSF1RP07333 972 aa22.24■■□□□ 1.15
SLC9A3R1-203ENST00000578958 USP17L8P0C7I0 530 aa22.24■■□□□ 1.15
SLC9A3R1-203ENST00000578958 CASP7P55210 303 aa22.24■■□□□ 1.15
SLC9A3R1-203ENST00000578958 BEND3Q5T5X7 828 aa22.24■■□□□ 1.15
SLC9A3R1-203ENST00000578958 C9orf78Q9NZ63 289 aaPredicted RBP22.24■■□□□ 1.15
SLC9A3R1-203ENST00000578958 LBX1P52954 281 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms