RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 MYD88Q99836 296 aa16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
SMARCD2-207ENST00000578234 COL4A1P02462 1669 aa16.21■□□□□ 0.18
SMARCD2-207ENST00000578234 POLR2AP24928 1970 aaKnown RBP16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 THSD7BQ9C0I4 1608 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 PDE8AO60658 829 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 RPS12P25398 132 aaKnown RBP16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 DOK7Q18PE1 504 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 USP48Q86UV5 1035 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 ABHD8Q96I13 439 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 METTL22Q9BUU2 404 aaPredicted RBP16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 SEC31BQ9NQW1 1179 aa16.2■□□□□ 0.18
SMARCD2-207ENST00000578234 ECE2O60344 883 aa16.19■□□□□ 0.18
SMARCD2-207ENST00000578234 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
SMARCD2-207ENST00000578234 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
SMARCD2-207ENST00000578234 TBC1D10BQ4KMP7 808 aaPredicted RBP16.18■□□□□ 0.18
SMARCD2-207ENST00000578234 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
SMARCD2-207ENST00000578234 KCNQ5Q9NR82 932 aa16.18■□□□□ 0.18
SMARCD2-207ENST00000578234 CASP8AP2Q9UKL3 1982 aa16.18■□□□□ 0.18
SMARCD2-207ENST00000578234 VIL1P09327 827 aaKnown RBP16.17■□□□□ 0.18
SMARCD2-207ENST00000578234 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
SMARCD2-207ENST00000578234 TSPYL6Q8N831 410 aa16.17■□□□□ 0.18
SMARCD2-207ENST00000578234 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
SMARCD2-207ENST00000578234 ANKIB1Q9P2G1 1089 aa16.17■□□□□ 0.18
SMARCD2-207ENST00000578234 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 UFL1O94874 794 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 DLK2Q6UY11 383 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 JARID2Q92833 1246 aaPredicted RBP16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 GGA1Q9UJY5 639 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 MAP3K2Q9Y2U5 619 aa16.16■□□□□ 0.18
SMARCD2-207ENST00000578234 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 CA12O43570 354 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 EGFRP00533 1210 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 HUNKP57058 714 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 DCPSQ96C86 337 aaKnown RBP16.15■□□□□ 0.18
SMARCD2-207ENST00000578234 IGKV5-2P06315 115 aa16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 WWC1Q8IX03 1113 aa16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 SCN9AQ15858 1988 aa16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 XDHP47989 1333 aa16.14■□□□□ 0.17
SMARCD2-207ENST00000578234 CTSWP56202 376 aa16.13■□□□□ 0.17
SMARCD2-207ENST00000578234 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
SMARCD2-207ENST00000578234 FAM161AQ3B820 660 aa16.13■□□□□ 0.17
SMARCD2-207ENST00000578234 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-207ENST00000578234 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
SMARCD2-207ENST00000578234 CDC5LQ99459 802 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-207ENST00000578234 ZNF609O15014 1411 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 NOGQ13253 232 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 KIF4BQ2VIQ3 1234 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 C2orf69Q8N8R5 385 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 AGBL3Q8NEM8 1001 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
SMARCD2-207ENST00000578234 ADM5C9JUS6 153 aa16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 ZNF280AP59817 542 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 PODNQ7Z5L7 613 aa16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 BSDC1Q9NW68 430 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 IL16Q14005 1332 aa16.11■□□□□ 0.17
SMARCD2-207ENST00000578234 NEURL1BA8MQ27 555 aa16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 ZNF157P51786 506 aaPredicted RBP16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 DGKZQ13574 1117 aa16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 SULF1Q8IWU6 871 aa16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 GMLQ99445 158 aa16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 GBA2Q9HCG7 927 aaPredicted RBP16.1■□□□□ 0.17
SMARCD2-207ENST00000578234 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 H7C1W4 665 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 CWF19L2Q2TBE0 894 aaKnown RBP16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 RGMBQ6NW40 437 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 G2E3Q7L622 706 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 CCDC102AQ96A19 550 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 ZIC5Q96T25 663 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 GREM2Q9H772 168 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 GGA3Q9NZ52 723 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 PSME4Q14997 1843 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 MYH3P11055 1940 aa16.09■□□□□ 0.17
SMARCD2-207ENST00000578234 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.16
SMARCD2-207ENST00000578234 USP17L8P0C7I0 530 aa16.08■□□□□ 0.16
SMARCD2-207ENST00000578234 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
SMARCD2-207ENST00000578234 WTIPA6NIX2 430 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms