RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 KDM2BQ8NHM5 1336 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 GADD45BO75293 160 aaPredicted RBP6.35□□□□□ -1.39
BRIP1-202ENST00000577598 DUSP27Q5VZP5 1158 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 FAM169BQ8N8A8 192 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 ADAM32Q8TC27 787 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRIP1-202ENST00000577598 KLK14Q9P0G3 267 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 FAM198AQ9UFP1 575 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 HCN4Q9Y3Q4 1203 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 RNASEH2AO75792 299 aaKnown RBP6.35□□□□□ -1.39
BRIP1-202ENST00000577598 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 MLC1Q15049 377 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 DZIP3Q86Y13 1208 aaKnown RBP6.35□□□□□ -1.39
BRIP1-202ENST00000577598 CAND2O75155 1236 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 USP17L7P0C7H9 530 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 GNA15P30679 374 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC174Q6PII3 467 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 ZNF513Q8N8E2 541 aaPredicted RBP6.34□□□□□ -1.39
BRIP1-202ENST00000577598 TTC8Q8TAM2 541 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 CEP126Q9P2H0 1117 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 SMTNL1A8MU46 457 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 ARID5BQ14865 1188 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC93Q567U6 631 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 LHFPL2Q6ZUX7 228 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 CLASRPQ8N2M8 674 aaKnown RBP6.34□□□□□ -1.39
BRIP1-202ENST00000577598 HELQQ8TDG4 1101 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 C12orf49Q9H741 205 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 RRN3Q9NYV6 651 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 XPOTO43592 962 aaKnown RBP6.34□□□□□ -1.39
BRIP1-202ENST00000577598 LIG1P18858 919 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 MAP3K12Q12852 859 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 CASC1Q6TDU7 716 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 TMC4Q7Z404 712 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 DNAJB7Q7Z6W7 309 aaPredicted RBP6.34□□□□□ -1.39
BRIP1-202ENST00000577598 IPO4Q8TEX9 1081 aaKnown RBP6.34□□□□□ -1.39
BRIP1-202ENST00000577598 TBC1D31Q96DN5 1066 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 HOOK2Q96ED9 719 aa6.34□□□□□ -1.39
BRIP1-202ENST00000577598 NUDT7P0C024 238 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 SOX11P35716 441 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 SQSTM1Q13501 440 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 HOMER1Q86YM7 354 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 PNISRQ8TF01 805 aaKnown RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 PPM1EQ8WY54 764 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 EDEM1Q92611 657 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 CDC23Q9UJX2 597 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 PYGLP06737 847 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 MYBL2P10244 700 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 ESRRAP11474 423 aaPredicted RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 NEK4P51957 841 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 MEX3CQ5U5Q3 659 aaKnown RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 CRBNQ96SW2 442 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 ZBTB21Q9ULJ3 1066 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 ZCCHC8Q6NZY4 707 aaKnown RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 RABEP2Q9H5N1 569 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 CWC25Q9NXE8 425 aaPredicted RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 RABL2BQ9UNT1 228 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 APAF1O14727 1248 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 LZTS3O60299 673 aaPredicted RBP6.33□□□□□ -1.4
BRIP1-202ENST00000577598 ELF2Q15723 593 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 SWI5Q1ZZU3 235 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 XRRA1Q6P2D8 792 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 SLC7A3Q8WY07 619 aa6.33□□□□□ -1.4
BRIP1-202ENST00000577598 CFAP69A5D8W1 941 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 MBD4O95243 580 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 RENBPP51606 427 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 MTMR1Q13613 665 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 TMCO3Q6UWJ1 677 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 USP33Q8TEY7 942 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 BARD1Q99728 777 aaKnown RBP6.32□□□□□ -1.4
BRIP1-202ENST00000577598 BSDC1Q9NW68 430 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-202ENST00000577598 ZSCAN20P17040 1043 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-202ENST00000577598 DNAJB2P25686 324 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 SH3PXD2AQ5TCZ1 1133 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 RNF19BQ6ZMZ0 732 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 CHAC2Q8WUX2 184 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 JAG2Q9Y219 1238 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 BOLA1Q9Y3E2 137 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
BRIP1-202ENST00000577598 EIF1AYO14602 144 aaKnown RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 FYB1O15117 783 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 CNTFP26441 200 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 SEPT2Q15019 361 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 PLCB4Q15147 1175 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 C6orf15Q6UXA7 325 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 GPSM2P81274 684 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 HMGN5P82970 282 aaKnown RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 NUDT16Q96DE0 195 aaKnown RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 LUZP4Q9P127 313 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 PES1O00541 588 aaKnown RBP6.31□□□□□ -1.4
BRIP1-202ENST00000577598 NR1I2O75469 434 aa6.31□□□□□ -1.4
BRIP1-202ENST00000577598 FAM13AO94988 1023 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms