RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 VPS33BQ9H267 617 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 CHD4Q14839 1912 aa13.44□□□□□ -0.26
ABR-235ENST00000576964 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 GPSM2P81274 684 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 WASHC4Q2M389 1173 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 NIM1KQ8IY84 436 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
ABR-235ENST00000576964 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
ABR-235ENST00000576964 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
ABR-235ENST00000576964 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
ABR-235ENST00000576964 ZNF594Q96JF6 807 aaPredicted RBP13.42□□□□□ -0.26
ABR-235ENST00000576964 RTFDC1Q9BY42 306 aaPredicted RBP13.42□□□□□ -0.26
ABR-235ENST00000576964 ZC3H12CQ9C0D7 883 aaKnown RBP13.42□□□□□ -0.26
ABR-235ENST00000576964 ZBTB7BO15156 539 aaPredicted RBP13.41□□□□□ -0.26
ABR-235ENST00000576964 CHRNDQ07001 517 aa13.41□□□□□ -0.26
ABR-235ENST00000576964 AOC3Q16853 763 aa13.41□□□□□ -0.26
ABR-235ENST00000576964 TBC1D16Q8TBP0 767 aa13.41□□□□□ -0.26
ABR-235ENST00000576964 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
ABR-235ENST00000576964 MROH5Q6ZUA9 1318 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 KDM2BQ8NHM5 1336 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 TAF1P21675 1872 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 EIF6P56537 245 aaKnown RBP13.4□□□□□ -0.26
ABR-235ENST00000576964 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 METTL24Q5JXM2 366 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 SLC51AQ86UW1 340 aa13.4□□□□□ -0.26
ABR-235ENST00000576964 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 MTX1Q13505 466 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
ABR-235ENST00000576964 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
ABR-235ENST00000576964 POLLQ9UGP5 575 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
ABR-235ENST00000576964 PRELPP51888 382 aa13.38□□□□□ -0.27
ABR-235ENST00000576964 KLHDC4Q8TBB5 520 aa13.38□□□□□ -0.27
ABR-235ENST00000576964 SIL1Q9H173 461 aa13.38□□□□□ -0.27
ABR-235ENST00000576964 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
ABR-235ENST00000576964 COL4A1P02462 1669 aa13.37□□□□□ -0.27
ABR-235ENST00000576964 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
ABR-235ENST00000576964 EYA2O00167 538 aa13.37□□□□□ -0.27
ABR-235ENST00000576964 TAF5LO75529 589 aa13.37□□□□□ -0.27
ABR-235ENST00000576964 CIAO1O76071 339 aa13.37□□□□□ -0.27
ABR-235ENST00000576964 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
ABR-235ENST00000576964 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
ABR-235ENST00000576964 C20orf194Q5TEA3 1177 aa13.37□□□□□ -0.27
ABR-235ENST00000576964 HELBQ8NG08 1087 aaPredicted RBP13.37□□□□□ -0.27
ABR-235ENST00000576964 PUS3Q9BZE2 481 aaKnown RBP13.37□□□□□ -0.27
ABR-235ENST00000576964 SBF1O95248 1867 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 FZD9O00144 591 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 HMMRO75330 724 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 IL15P40933 162 aaPredicted RBP13.36□□□□□ -0.27
ABR-235ENST00000576964 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 G3BP1Q13283 466 aaKnown RBP eCLIP13.36□□□□□ -0.27
ABR-235ENST00000576964 TNIP1Q15025 636 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 ZNF784Q8NCA9 323 aaPredicted RBP13.36□□□□□ -0.27
ABR-235ENST00000576964 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
ABR-235ENST00000576964 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 RIPOR2Q9Y4F9 1068 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 GJA3Q9Y6H8 435 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
ABR-235ENST00000576964 ECE2O60344 883 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 RFX5P48382 616 aaPredicted RBP13.35□□□□□ -0.27
ABR-235ENST00000576964 UBE4AQ14139 1066 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 PUM3Q15397 648 aaKnown RBP13.35□□□□□ -0.27
ABR-235ENST00000576964 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 ZNF804AQ7Z570 1209 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 VPS37DQ86XT2 251 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 GPC2Q8N158 579 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 DBNDD1Q9H9R9 158 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 ZBTB40Q9NUA8 1239 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 DUOX1Q9NRD9 1551 aa13.35□□□□□ -0.27
ABR-235ENST00000576964 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
ABR-235ENST00000576964 PDE8BO95263 885 aa13.34□□□□□ -0.27
ABR-235ENST00000576964 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
ABR-235ENST00000576964 CAVIN4Q5BKX8 364 aa13.34□□□□□ -0.27
ABR-235ENST00000576964 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
ABR-235ENST00000576964 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
ABR-235ENST00000576964 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
ABR-235ENST00000576964 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
ABR-235ENST00000576964 COA1Q9GZY4 146 aa13.34□□□□□ -0.27
ABR-235ENST00000576964 PA2G4Q9UQ80 394 aaKnown RBP13.34□□□□□ -0.27
ABR-235ENST00000576964 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
ABR-235ENST00000576964 CCDC88AQ3V6T2 1871 aa13.33□□□□□ -0.27
ABR-235ENST00000576964 IQCA1LA6NCM1 817 aa13.33□□□□□ -0.28
ABR-235ENST00000576964 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
ABR-235ENST00000576964 RAD17O75943 681 aa13.33□□□□□ -0.28
ABR-235ENST00000576964 DDNO94850 711 aaPredicted RBP13.33□□□□□ -0.28
ABR-235ENST00000576964 SLC5A1P13866 664 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms