RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 L3MBTL3Q96JM7 780 aaPredicted RBP19.23■□□□□ 0.67
SMG6-220ENST00000576218 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
SMG6-220ENST00000576218 POLLQ9UGP5 575 aa19.23■□□□□ 0.67
SMG6-220ENST00000576218 COL4A5P29400 1685 aa19.23■□□□□ 0.67
SMG6-220ENST00000576218 KCNJ4P48050 445 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
SMG6-220ENST00000576218 FSTL1Q12841 308 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 TNIP1Q15025 636 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 LMBR1LQ6UX01 489 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 GPR101Q96P66 508 aaPredicted RBP19.22■□□□□ 0.67
SMG6-220ENST00000576218 DBNDD1Q9H9R9 158 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 PODXL2Q9NZ53 605 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 ZBED9Q6R2W3 1325 aa19.22■□□□□ 0.67
SMG6-220ENST00000576218 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 RAD17O75943 681 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 CSF1RP07333 972 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 HSPA6P17066 643 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 ATP2B4P23634 1241 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 CIAPIN1Q6FI81 312 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 CLEC11AQ9Y240 323 aa19.21■□□□□ 0.67
SMG6-220ENST00000576218 POTECB2RU33 542 aa19.2■□□□□ 0.66
SMG6-220ENST00000576218 EPHX2P34913 555 aa19.2■□□□□ 0.66
SMG6-220ENST00000576218 CCT4P50991 539 aaKnown RBP19.2■□□□□ 0.66
SMG6-220ENST00000576218 FOXO4P98177 505 aa19.2■□□□□ 0.66
SMG6-220ENST00000576218 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
SMG6-220ENST00000576218 FRAT1Q92837 279 aaPredicted RBP19.2■□□□□ 0.66
SMG6-220ENST00000576218 MINPP1Q9UNW1 487 aa19.2■□□□□ 0.66
SMG6-220ENST00000576218 IPO8O15397 1037 aaKnown RBP19.19■□□□□ 0.66
SMG6-220ENST00000576218 ECE2O60344 883 aa19.19■□□□□ 0.66
SMG6-220ENST00000576218 NBPF7P0C2Y1 421 aaPredicted RBP19.19■□□□□ 0.66
SMG6-220ENST00000576218 CXCL9Q07325 125 aa19.19■□□□□ 0.66
SMG6-220ENST00000576218 SUCLG2Q96I99 432 aa19.19■□□□□ 0.66
SMG6-220ENST00000576218 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
SMG6-220ENST00000576218 TAF1DQ9H5J8 278 aaPredicted RBP19.19■□□□□ 0.66
SMG6-220ENST00000576218 SCN4AP35499 1836 aa19.18■□□□□ 0.66
SMG6-220ENST00000576218 PNMA8AQ86V59 439 aaPredicted RBP19.18■□□□□ 0.66
SMG6-220ENST00000576218 EPHA10Q5JZY3 1008 aa19.17■□□□□ 0.66
SMG6-220ENST00000576218 CHADLQ6NUI6 762 aa19.17■□□□□ 0.66
SMG6-220ENST00000576218 LDHDQ86WU2 507 aa19.17■□□□□ 0.66
SMG6-220ENST00000576218 CNNM1Q9NRU3 951 aa19.17■□□□□ 0.66
SMG6-220ENST00000576218 GMPSP49915 693 aaPredicted RBP19.16■□□□□ 0.66
SMG6-220ENST00000576218 APLP1P51693 650 aa19.16■□□□□ 0.66
SMG6-220ENST00000576218 BRPF1P55201 1214 aaPredicted RBP19.16■□□□□ 0.66
SMG6-220ENST00000576218 LDHAL6AQ6ZMR3 332 aa19.16■□□□□ 0.66
SMG6-220ENST00000576218 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
SMG6-220ENST00000576218 LTBP1Q14766 1721 aa19.15■□□□□ 0.66
SMG6-220ENST00000576218 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
SMG6-220ENST00000576218 CHRNDQ07001 517 aa19.15■□□□□ 0.66
SMG6-220ENST00000576218 FBXW7Q969H0 707 aa19.15■□□□□ 0.66
SMG6-220ENST00000576218 ZNF594Q96JF6 807 aaPredicted RBP19.15■□□□□ 0.66
SMG6-220ENST00000576218 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
SMG6-220ENST00000576218 LEMD3Q9Y2U8 911 aa19.15■□□□□ 0.66
SMG6-220ENST00000576218 UTYO14607 1347 aa19.15■□□□□ 0.66
SMG6-220ENST00000576218 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 PLIN1O60240 522 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 BCAR3O75815 825 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 POTEIP0CG38 1075 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 POTEJP0CG39 1038 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 EPS15P42566 896 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 SCNN1DP51172 638 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 ARHGAP45Q92619 1136 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 ZNF804BA4D1E1 1349 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 MED23Q9ULK4 1368 aa19.14■□□□□ 0.65
SMG6-220ENST00000576218 PSMD14O00487 310 aa19.13■□□□□ 0.65
SMG6-220ENST00000576218 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
SMG6-220ENST00000576218 GPRC5DQ9NZD1 345 aa19.13■□□□□ 0.65
SMG6-220ENST00000576218 H7C1D1 291 aa19.12■□□□□ 0.65
SMG6-220ENST00000576218 HELBQ8NG08 1087 aaPredicted RBP19.12■□□□□ 0.65
SMG6-220ENST00000576218 ADARB2Q9NS39 739 aaKnown RBP19.12■□□□□ 0.65
SMG6-220ENST00000576218 TAF5LO75529 589 aa19.11■□□□□ 0.65
SMG6-220ENST00000576218 ZKSCAN2Q63HK3 967 aa19.11■□□□□ 0.65
SMG6-220ENST00000576218 ATF7IPQ6VMQ6 1270 aa19.11■□□□□ 0.65
SMG6-220ENST00000576218 USP50Q70EL3 339 aaPredicted RBP19.11■□□□□ 0.65
SMG6-220ENST00000576218 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
SMG6-220ENST00000576218 CLUAP1Q96AJ1 413 aa19.11■□□□□ 0.65
SMG6-220ENST00000576218 ZBTB12Q9Y330 459 aaPredicted RBP19.11■□□□□ 0.65
SMG6-220ENST00000576218 PODNQ7Z5L7 613 aa19.1■□□□□ 0.65
SMG6-220ENST00000576218 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
SMG6-220ENST00000576218 KAZALD1Q96I82 304 aa19.1■□□□□ 0.65
SMG6-220ENST00000576218 CNOT7Q9UIV1 285 aaKnown RBP19.1■□□□□ 0.65
SMG6-220ENST00000576218 TRIM27P14373 513 aa19.09■□□□□ 0.65
SMG6-220ENST00000576218 RPS12P25398 132 aaKnown RBP19.09■□□□□ 0.65
SMG6-220ENST00000576218 RABL6Q3YEC7 729 aaPredicted RBP19.09■□□□□ 0.65
SMG6-220ENST00000576218 ANKRD44Q8N8A2 993 aa19.09■□□□□ 0.65
SMG6-220ENST00000576218 COA1Q9GZY4 146 aa19.09■□□□□ 0.65
SMG6-220ENST00000576218 KCNQ5Q9NR82 932 aa19.09■□□□□ 0.65
SMG6-220ENST00000576218 USP17L3A6NCW0 530 aa19.08■□□□□ 0.64
SMG6-220ENST00000576218 USP17L4A6NCW7 530 aa19.08■□□□□ 0.64
SMG6-220ENST00000576218 WTIPA6NIX2 430 aaPredicted RBP19.08■□□□□ 0.64
SMG6-220ENST00000576218 GNAI3P08754 354 aa19.08■□□□□ 0.64
SMG6-220ENST00000576218 MAP1SQ66K74 1059 aaPredicted RBP19.08■□□□□ 0.64
SMG6-220ENST00000576218 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.64
SMG6-220ENST00000576218 ZNF804AQ7Z570 1209 aa19.08■□□□□ 0.64
SMG6-220ENST00000576218 MROH5Q6ZUA9 1318 aa19.07■□□□□ 0.64
SMG6-220ENST00000576218 METTL24Q5JXM2 366 aa19.07■□□□□ 0.64
SMG6-220ENST00000576218 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
SMG6-220ENST00000576218 DPF2Q92785 391 aa19.07■□□□□ 0.64
SMG6-220ENST00000576218 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
SMG6-220ENST00000576218 KLRK1P26718 216 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms