RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-216ENST00000574344 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
NPLOC4-216ENST00000574344 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
NPLOC4-216ENST00000574344 YDJCA8MPS7 323 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 ECE2O60344 883 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 DOK7Q18PE1 504 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 UBE3BQ7Z3V4 1068 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 ZC3H12CQ9C0D7 883 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
NPLOC4-216ENST00000574344 CNTNAP1P78357 1384 aa12.31□□□□□ -0.44
NPLOC4-216ENST00000574344 PSMD14O00487 310 aa12.31□□□□□ -0.44
NPLOC4-216ENST00000574344 HSPA1AP0DMV8 641 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-216ENST00000574344 HSPA1BP0DMV9 641 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-216ENST00000574344 H7C1D1 291 aa12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 VAMP4O75379 141 aa12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 GREM2Q9H772 168 aa12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 XDHP47989 1333 aa12.3□□□□□ -0.44
NPLOC4-216ENST00000574344 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-216ENST00000574344 GCKRQ14397 625 aa12.29□□□□□ -0.44
NPLOC4-216ENST00000574344 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
NPLOC4-216ENST00000574344 TTLL11Q8NHH1 800 aa12.29□□□□□ -0.44
NPLOC4-216ENST00000574344 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
NPLOC4-216ENST00000574344 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
NPLOC4-216ENST00000574344 TRAF5O00463 557 aa12.28□□□□□ -0.44
NPLOC4-216ENST00000574344 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPLOC4-216ENST00000574344 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
NPLOC4-216ENST00000574344 TRPM4Q8TD43 1214 aa12.28□□□□□ -0.44
NPLOC4-216ENST00000574344 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
NPLOC4-216ENST00000574344 F6X3S4 739 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 H7C1W4 665 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 ATP2B4P23634 1241 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 VEGFBP49765 207 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 GRM1Q13255 1194 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 DEFB115Q30KQ5 88 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 MPHOSPH8Q99549 860 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 GLIS2Q9BZE0 524 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 KCNQ5Q9NR82 932 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-216ENST00000574344 ITGA6P23229 1130 aa12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 TBC1D10BQ4KMP7 808 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 DPF2Q92785 391 aa12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 BSDC1Q9NW68 430 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-216ENST00000574344 RASSF10A6NK89 507 aa12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 KCNJ4P48050 445 aa12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 HIRAP54198 1017 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 PLA2G12BQ9BX93 195 aa12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 MINPP1Q9UNW1 487 aa12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 MED23Q9ULK4 1368 aa12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
NPLOC4-216ENST00000574344 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 CASP7P55210 303 aa12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 KIF4BQ2VIQ3 1234 aa12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 BEND3Q5T5X7 828 aa12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 COL13A1Q5TAT6 717 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 C9orf78Q9NZ63 289 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-216ENST00000574344 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 EGFRP00533 1210 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 VIL1P09327 827 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 ECE1P42892 770 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 USP48Q86UV5 1035 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 SRCIN1Q9C0H9 1055 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 ANKRD2Q9GZV1 360 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
NPLOC4-216ENST00000574344 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 E9PSI1 815 aa12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 GRM8O00222 908 aa12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 CSF1RP07333 972 aa12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 IFIT5Q13325 482 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-216ENST00000574344 CST9Q5W186 159 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 577.8 ms