RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 IER5Q5VY09 327 aa8.44□□□□□ -1.06
SF3B3-214ENST00000572365 ZFP42Q96MM3 310 aa8.44□□□□□ -1.06
SF3B3-214ENST00000572365 CFDP1Q9UEE9 299 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-214ENST00000572365 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 TGFBR3LH3BV60 316 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 ZAP70P43403 619 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 RBM25P49756 843 aaKnown RBP8.43□□□□□ -1.06
SF3B3-214ENST00000572365 AAMPQ13685 434 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 TMC7Q7Z402 723 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 ATCAYQ86WG3 371 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 TREML1Q86YW5 311 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 KLRG1Q96E93 195 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 TIMMDC1Q9NPL8 285 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 EP400Q96L91 3159 aa8.43□□□□□ -1.06
SF3B3-214ENST00000572365 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
SF3B3-214ENST00000572365 FIGNL2A6NMB9 653 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 IGHA2P01877 340 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 RHOQP17081 205 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 MZF1P28698 734 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-214ENST00000572365 SUSD3Q96L08 255 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 FAM129BQ96TA1 746 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 DMGDHQ9UI17 866 aaKnown RBP8.42□□□□□ -1.06
SF3B3-214ENST00000572365 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 JCADQ9P266 1359 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 PLXNC1O60486 1568 aa8.42□□□□□ -1.06
SF3B3-214ENST00000572365 SYNMO15061 1565 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 AFF2P51816 1311 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 MSX1P28360 303 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 GJD3Q8N144 294 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 DMRTB1Q96MA1 342 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 ZIC5Q96T25 663 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 DYRK1BQ9Y463 629 aa8.41□□□□□ -1.06
SF3B3-214ENST00000572365 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 TREHO43280 583 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 MICAL2O94851 1124 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 USP5P45974 858 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 PDE3BQ13370 1112 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 POLIQ9UNA4 740 aa8.4□□□□□ -1.06
SF3B3-214ENST00000572365 ADGBQ8N7X0 1667 aa8.4□□□□□ -1.07
SF3B3-214ENST00000572365 INO80Q9ULG1 1556 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-214ENST00000572365 GPATCH8Q9UKJ3 1502 aaKnown RBP8.39□□□□□ -1.07
SF3B3-214ENST00000572365 PZPP20742 1482 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 FMN1Q68DA7 1419 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 PDGFAP04085 211 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 ZNF16P17020 682 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-214ENST00000572365 DNM1Q05193 864 aaKnown RBP8.39□□□□□ -1.07
SF3B3-214ENST00000572365 DSC3Q14574 896 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.39□□□□□ -1.07
SF3B3-214ENST00000572365 ARSJQ5FYB0 599 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-214ENST00000572365 EDEM1Q92611 657 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 HSH2DQ96JZ2 352 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 C8orf37Q96NL8 207 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 CRISPLD1Q9H336 500 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
SF3B3-214ENST00000572365 DHX29Q7Z478 1369 aaKnown RBP8.38□□□□□ -1.07
SF3B3-214ENST00000572365 OPLAHO14841 1288 aa8.38□□□□□ -1.07
SF3B3-214ENST00000572365 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
SF3B3-214ENST00000572365 FMR1Q06787 632 aaKnown RBP eCLIP8.38□□□□□ -1.078e-7■■■■□ 22.3
SF3B3-214ENST00000572365 ALKBH8Q96BT7 664 aaKnown RBP8.38□□□□□ -1.07
SF3B3-214ENST00000572365 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 A0A1W2PNR3 127 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 UNCXA6NJT0 531 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 GPR182O15218 404 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 F11P03951 625 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 KCNA6P17658 529 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 TMC1Q8TDI8 760 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 GPR152Q8TDT2 470 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 GIPC2Q8TF65 315 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 DDX17Q92841 729 aaKnown RBP8.37□□□□□ -1.07
SF3B3-214ENST00000572365 EID1Q9Y6B2 187 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 SCAF11Q99590 1463 aaKnown RBP8.37□□□□□ -1.07
SF3B3-214ENST00000572365 NLRP1Q9C000 1473 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 UBR1Q8IWV7 1749 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 RGS12O14924 1447 aa8.37□□□□□ -1.07
SF3B3-214ENST00000572365 E9PSI1 815 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 MAN1A2O60476 641 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 ADAMTS2O95450 1211 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
SF3B3-214ENST00000572365 P4HBP07237 508 aaKnown RBP8.36□□□□□ -1.07
SF3B3-214ENST00000572365 PCSK2P16519 638 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 INPP5BP32019 993 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 IDH3AP50213 366 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 Q6ZNB5 142 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
SF3B3-214ENST00000572365 NEUROD4Q9HD90 331 aa8.36□□□□□ -1.07
SF3B3-214ENST00000572365 COL16A1Q07092 1604 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-214ENST00000572365 NCOA2Q15596 1464 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 ARSDP51689 593 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 EHHADHQ08426 723 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 EAPPQ56P03 285 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms