RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PODXL2Q9NZ53 605 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 THSD7BQ9C0I4 1608 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 MYH3P11055 1940 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 COL4A1P02462 1669 aa16.88■□□□□ 0.29
SPG7-221ENST00000569720 LBX1P52954 281 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
SPG7-221ENST00000569720 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 GPR101Q96P66 508 aaPredicted RBP16.87■□□□□ 0.29
SPG7-221ENST00000569720 MAP3K2Q9Y2U5 619 aa16.87■□□□□ 0.29
SPG7-221ENST00000569720 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
SPG7-221ENST00000569720 UFL1O94874 794 aa16.86■□□□□ 0.29
SPG7-221ENST00000569720 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
SPG7-221ENST00000569720 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
SPG7-221ENST00000569720 ZNF408Q9H9D4 720 aa16.86■□□□□ 0.29
SPG7-221ENST00000569720 GGA1Q9UJY5 639 aa16.86■□□□□ 0.29
SPG7-221ENST00000569720 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
SPG7-221ENST00000569720 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
SPG7-221ENST00000569720 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
SPG7-221ENST00000569720 SAPCD2Q86UD0 394 aa16.85■□□□□ 0.29
SPG7-221ENST00000569720 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
SPG7-221ENST00000569720 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
SPG7-221ENST00000569720 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
SPG7-221ENST00000569720 HHIPL1Q96JK4 782 aa16.85■□□□□ 0.29
SPG7-221ENST00000569720 CCDC85AQ96PX6 553 aaPredicted RBP16.85■□□□□ 0.29
SPG7-221ENST00000569720 CACNA1FO60840 1977 aa16.84■□□□□ 0.29
SPG7-221ENST00000569720 HSPA8P11142 646 aaKnown RBP16.84■□□□□ 0.29
SPG7-221ENST00000569720 MAP2K2P36507 400 aa16.84■□□□□ 0.29
SPG7-221ENST00000569720 TBC1D10BQ4KMP7 808 aaPredicted RBP16.84■□□□□ 0.29
SPG7-221ENST00000569720 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
SPG7-221ENST00000569720 WWC1Q8IX03 1113 aa16.84■□□□□ 0.29
SPG7-221ENST00000569720 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
SPG7-221ENST00000569720 XDHP47989 1333 aa16.84■□□□□ 0.29
SPG7-221ENST00000569720 SCN9AQ15858 1988 aa16.84■□□□□ 0.29
SPG7-221ENST00000569720 IL16Q14005 1332 aa16.83■□□□□ 0.28
SPG7-221ENST00000569720 PSME4Q14997 1843 aa16.83■□□□□ 0.28
SPG7-221ENST00000569720 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
SPG7-221ENST00000569720 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
SPG7-221ENST00000569720 USP48Q86UV5 1035 aa16.83■□□□□ 0.28
SPG7-221ENST00000569720 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
SPG7-221ENST00000569720 DCPSQ96C86 337 aaKnown RBP16.83■□□□□ 0.28
SPG7-221ENST00000569720 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.28
SPG7-221ENST00000569720 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
SPG7-221ENST00000569720 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
SPG7-221ENST00000569720 VIL1P09327 827 aaKnown RBP16.82■□□□□ 0.28
SPG7-221ENST00000569720 CTSWP56202 376 aa16.82■□□□□ 0.28
SPG7-221ENST00000569720 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
SPG7-221ENST00000569720 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
SPG7-221ENST00000569720 KRT26Q7Z3Y9 468 aa16.82■□□□□ 0.28
SPG7-221ENST00000569720 AOC2O75106 756 aa16.81■□□□□ 0.28
SPG7-221ENST00000569720 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
SPG7-221ENST00000569720 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
SPG7-221ENST00000569720 KIF4BQ2VIQ3 1234 aa16.8■□□□□ 0.28
SPG7-221ENST00000569720 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
SPG7-221ENST00000569720 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
SPG7-221ENST00000569720 NEURL1BA8MQ27 555 aa16.79■□□□□ 0.28
SPG7-221ENST00000569720 ANP32CO43423 234 aa16.79■□□□□ 0.28
SPG7-221ENST00000569720 CA12O43570 354 aa16.79■□□□□ 0.28
SPG7-221ENST00000569720 HUNKP57058 714 aa16.79■□□□□ 0.28
SPG7-221ENST00000569720 CWF19L2Q2TBE0 894 aaKnown RBP16.79■□□□□ 0.28
SPG7-221ENST00000569720 RSBN1LQ6PCB5 846 aaPredicted RBP16.79■□□□□ 0.28
SPG7-221ENST00000569720 C2orf69Q8N8R5 385 aa16.79■□□□□ 0.28
SPG7-221ENST00000569720 TTLL11Q8NHH1 800 aa16.79■□□□□ 0.28
SPG7-221ENST00000569720 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
SPG7-221ENST00000569720 EGFRP00533 1210 aa16.78■□□□□ 0.28
SPG7-221ENST00000569720 G2E3Q7L622 706 aa16.78■□□□□ 0.28
SPG7-221ENST00000569720 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
SPG7-221ENST00000569720 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
SPG7-221ENST00000569720 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
SPG7-221ENST00000569720 ZNF609O15014 1411 aa16.78■□□□□ 0.28
SPG7-221ENST00000569720 H7C1W4 665 aa16.77■□□□□ 0.28
SPG7-221ENST00000569720 IGHMBP2P38935 993 aaKnown RBP16.77■□□□□ 0.28
SPG7-221ENST00000569720 BRPF1P55201 1214 aaPredicted RBP16.77■□□□□ 0.28
SPG7-221ENST00000569720 FLIIQ13045 1269 aa16.77■□□□□ 0.28
SPG7-221ENST00000569720 NOGQ13253 232 aa16.77■□□□□ 0.28
SPG7-221ENST00000569720 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
SPG7-221ENST00000569720 GREM2Q9H772 168 aa16.77■□□□□ 0.28
SPG7-221ENST00000569720 GBA2Q9HCG7 927 aaPredicted RBP16.77■□□□□ 0.28
SPG7-221ENST00000569720 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.28
SPG7-221ENST00000569720 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
SPG7-221ENST00000569720 USP17L3A6NCW0 530 aa16.76■□□□□ 0.27
SPG7-221ENST00000569720 USP17L4A6NCW7 530 aa16.76■□□□□ 0.27
SPG7-221ENST00000569720 ADM5C9JUS6 153 aa16.76■□□□□ 0.27
SPG7-221ENST00000569720 FKBP5Q13451 457 aaPredicted RBP16.76■□□□□ 0.27
SPG7-221ENST00000569720 USP17L1Q7RTZ2 530 aa16.76■□□□□ 0.27
SPG7-221ENST00000569720 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
SPG7-221ENST00000569720 GGA3Q9NZ52 723 aa16.76■□□□□ 0.27
SPG7-221ENST00000569720 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 USP17L8P0C7I0 530 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
SPG7-221ENST00000569720 ZNF280AP59817 542 aaPredicted RBP16.75■□□□□ 0.27
SPG7-221ENST00000569720 GCKRQ14397 625 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 RGMBQ6NW40 437 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
SPG7-221ENST00000569720 SCARF1Q14162 830 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms