RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ITGA6P23229 1130 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 TNIP1Q15025 636 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 CIAPIN1Q6FI81 312 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-225ENST00000569245 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-225ENST00000569245 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
COMMD4-225ENST00000569245 PTPRCP08575 1304 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 LDHDQ86WU2 507 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 DBNDD1Q9H9R9 158 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 RTL9Q8NET4 1388 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 COL4A1P02462 1669 aa18.28■□□□□ 0.52
COMMD4-225ENST00000569245 XDHP47989 1333 aa18.27■□□□□ 0.52
COMMD4-225ENST00000569245 ANKRD18BA2A2Z9 1011 aa18.27■□□□□ 0.52
COMMD4-225ENST00000569245 CSF1RP07333 972 aa18.27■□□□□ 0.52
COMMD4-225ENST00000569245 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-225ENST00000569245 CACNA1FO60840 1977 aa18.27■□□□□ 0.52
COMMD4-225ENST00000569245 YDJCA8MPS7 323 aa18.26■□□□□ 0.51
COMMD4-225ENST00000569245 ATP2B4P23634 1241 aa18.26■□□□□ 0.51
COMMD4-225ENST00000569245 EPS15P42566 896 aa18.26■□□□□ 0.51
COMMD4-225ENST00000569245 GMPSP49915 693 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-225ENST00000569245 SCNN1DP51172 638 aa18.26■□□□□ 0.51
COMMD4-225ENST00000569245 IFIT5Q13325 482 aaKnown RBP18.26■□□□□ 0.51
COMMD4-225ENST00000569245 MINPP1Q9UNW1 487 aa18.26■□□□□ 0.51
COMMD4-225ENST00000569245 ECE2O60344 883 aa18.25■□□□□ 0.51
COMMD4-225ENST00000569245 HTRA3P83110 453 aa18.25■□□□□ 0.51
COMMD4-225ENST00000569245 FOXO4P98177 505 aa18.25■□□□□ 0.51
COMMD4-225ENST00000569245 LMBR1LQ6UX01 489 aa18.25■□□□□ 0.51
COMMD4-225ENST00000569245 TAF7LQ5H9L4 462 aa18.24■□□□□ 0.51
COMMD4-225ENST00000569245 GPRC5DQ9NZD1 345 aa18.24■□□□□ 0.51
COMMD4-225ENST00000569245 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
COMMD4-225ENST00000569245 DUOX1Q9NRD9 1551 aa18.24■□□□□ 0.51
COMMD4-225ENST00000569245 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
COMMD4-225ENST00000569245 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
COMMD4-225ENST00000569245 EPHA10Q5JZY3 1008 aa18.23■□□□□ 0.51
COMMD4-225ENST00000569245 ANKRD2Q9GZV1 360 aa18.23■□□□□ 0.51
COMMD4-225ENST00000569245 PSMD14O00487 310 aa18.22■□□□□ 0.51
COMMD4-225ENST00000569245 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 KCNJ4P48050 445 aa18.22■□□□□ 0.51
COMMD4-225ENST00000569245 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 USP50Q70EL3 339 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
COMMD4-225ENST00000569245 ADARB2Q9NS39 739 aaKnown RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-225ENST00000569245 SCN4AP35499 1836 aa18.21■□□□□ 0.51
COMMD4-225ENST00000569245 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
COMMD4-225ENST00000569245 CNOT7Q9UIV1 285 aaKnown RBP18.21■□□□□ 0.51
COMMD4-225ENST00000569245 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-225ENST00000569245 H7C1D1 291 aa18.2■□□□□ 0.5
COMMD4-225ENST00000569245 CNTROBQ8N137 903 aa18.2■□□□□ 0.5
COMMD4-225ENST00000569245 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
COMMD4-225ENST00000569245 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
COMMD4-225ENST00000569245 CHRNDQ07001 517 aa18.19■□□□□ 0.5
COMMD4-225ENST00000569245 MICALL2Q8IY33 904 aa18.19■□□□□ 0.5
COMMD4-225ENST00000569245 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
COMMD4-225ENST00000569245 CNNM1Q9NRU3 951 aa18.19■□□□□ 0.5
COMMD4-225ENST00000569245 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
COMMD4-225ENST00000569245 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
COMMD4-225ENST00000569245 DPF2Q92785 391 aa18.18■□□□□ 0.5
COMMD4-225ENST00000569245 ZNF594Q96JF6 807 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-225ENST00000569245 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
COMMD4-225ENST00000569245 UTYO14607 1347 aa18.18■□□□□ 0.5
COMMD4-225ENST00000569245 ITGBL1O95965 494 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-225ENST00000569245 RPS12P25398 132 aaKnown RBP18.17■□□□□ 0.5
COMMD4-225ENST00000569245 PODNQ7Z5L7 613 aa18.17■□□□□ 0.5
COMMD4-225ENST00000569245 HELBQ8NG08 1087 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-225ENST00000569245 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
COMMD4-225ENST00000569245 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
COMMD4-225ENST00000569245 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
COMMD4-225ENST00000569245 MYH3P11055 1940 aa18.17■□□□□ 0.5
COMMD4-225ENST00000569245 MED23Q9ULK4 1368 aa18.17■□□□□ 0.5
COMMD4-225ENST00000569245 LTBP1Q14766 1721 aa18.16■□□□□ 0.5
COMMD4-225ENST00000569245 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
COMMD4-225ENST00000569245 PLIN1O60240 522 aa18.16■□□□□ 0.5
COMMD4-225ENST00000569245 TAF5LO75529 589 aa18.16■□□□□ 0.5
COMMD4-225ENST00000569245 VIL1P09327 827 aaKnown RBP18.16■□□□□ 0.5
COMMD4-225ENST00000569245 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
COMMD4-225ENST00000569245 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
COMMD4-225ENST00000569245 USP17L3A6NCW0 530 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 USP17L4A6NCW7 530 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-225ENST00000569245 RBM26Q5T8P6 1007 aaKnown RBP18.15■□□□□ 0.5
COMMD4-225ENST00000569245 USP17L1Q7RTZ2 530 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 COA1Q9GZY4 146 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
COMMD4-225ENST00000569245 KLRK1P26718 216 aa18.14■□□□□ 0.49
COMMD4-225ENST00000569245 TBC1D10BQ4KMP7 808 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-225ENST00000569245 RSBN1LQ6PCB5 846 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-225ENST00000569245 SAMD7Q7Z3H4 446 aa18.14■□□□□ 0.49
COMMD4-225ENST00000569245 TXNRD3Q86VQ6 643 aa18.14■□□□□ 0.49
COMMD4-225ENST00000569245 TRPM4Q8TD43 1214 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms