RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 RAD17O75943 681 aa25.76■■□□□ 1.71
CLK3-225ENST00000569063 UFL1O94874 794 aa25.76■■□□□ 1.71
CLK3-225ENST00000569063 HTRA3P83110 453 aa25.76■■□□□ 1.71
CLK3-225ENST00000569063 ZC3H12CQ9C0D7 883 aaKnown RBP25.76■■□□□ 1.71
CLK3-225ENST00000569063 GPRC5DQ9NZD1 345 aa25.76■■□□□ 1.71
CLK3-225ENST00000569063 XDHP47989 1333 aa25.76■■□□□ 1.71
CLK3-225ENST00000569063 SLC4A10Q6U841 1118 aa25.75■■□□□ 1.71
CLK3-225ENST00000569063 SSH1Q8WYL5 1049 aa25.75■■□□□ 1.71
CLK3-225ENST00000569063 DBNDD1Q9H9R9 158 aa25.75■■□□□ 1.71
CLK3-225ENST00000569063 MINPP1Q9UNW1 487 aa25.75■■□□□ 1.71
CLK3-225ENST00000569063 CLEC11AQ9Y240 323 aa25.75■■□□□ 1.71
CLK3-225ENST00000569063 PTPRCP08575 1304 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 GRM8O00222 908 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 ITGA6P23229 1130 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 GMPSP49915 693 aaPredicted RBP25.74■■□□□ 1.71
CLK3-225ENST00000569063 FOXO4P98177 505 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 FAM161AQ3B820 660 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 USP50Q70EL3 339 aaPredicted RBP25.74■■□□□ 1.71
CLK3-225ENST00000569063 MIER1Q8N108 512 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 GPR101Q96P66 508 aaPredicted RBP25.74■■□□□ 1.71
CLK3-225ENST00000569063 SRCIN1Q9C0H9 1055 aa25.74■■□□□ 1.71
CLK3-225ENST00000569063 ECE2O60344 883 aa25.73■■□□□ 1.71
CLK3-225ENST00000569063 ITGBL1O95965 494 aaPredicted RBP25.73■■□□□ 1.71
CLK3-225ENST00000569063 ATP2B4P23634 1241 aa25.73■■□□□ 1.71
CLK3-225ENST00000569063 IGHMBP2P38935 993 aaKnown RBP25.73■■□□□ 1.71
CLK3-225ENST00000569063 ALDH1L2Q3SY69 923 aa25.73■■□□□ 1.71
CLK3-225ENST00000569063 PASKQ96RG2 1323 aa25.72■■□□□ 1.71
CLK3-225ENST00000569063 CT47B1P0C2W7 299 aaPredicted RBP25.72■■□□□ 1.71
CLK3-225ENST00000569063 DOK7Q18PE1 504 aa25.72■■□□□ 1.71
CLK3-225ENST00000569063 ADARB2Q9NS39 739 aaKnown RBP25.72■■□□□ 1.71
CLK3-225ENST00000569063 C9orf78Q9NZ63 289 aaPredicted RBP25.71■■□□□ 1.71
CLK3-225ENST00000569063 CNTROBQ8N137 903 aa25.7■■□□□ 1.7
CLK3-225ENST00000569063 KLRG1Q96E93 195 aa25.7■■□□□ 1.7
CLK3-225ENST00000569063 BCL2L13Q9BXK5 485 aa25.7■■□□□ 1.7
CLK3-225ENST00000569063 ANKRD18BA2A2Z9 1011 aa25.69■■□□□ 1.7
CLK3-225ENST00000569063 PSMD14O00487 310 aa25.69■■□□□ 1.7
CLK3-225ENST00000569063 MAP1SQ66K74 1059 aaPredicted RBP25.69■■□□□ 1.7
CLK3-225ENST00000569063 MPHOSPH8Q99549 860 aa25.69■■□□□ 1.7
CLK3-225ENST00000569063 DPF2Q92785 391 aa25.68■■□□□ 1.7
CLK3-225ENST00000569063 KCNQ5Q9NR82 932 aa25.68■■□□□ 1.7
CLK3-225ENST00000569063 CREBZFQ9NS37 354 aa25.68■■□□□ 1.7
CLK3-225ENST00000569063 SPEF2Q9C093 1822 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 UTYO14607 1347 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 WTIPA6NIX2 430 aaPredicted RBP25.67■■□□□ 1.7
CLK3-225ENST00000569063 G3V3G9 751 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 CCT4P50991 539 aaKnown RBP25.67■■□□□ 1.7
CLK3-225ENST00000569063 IFIT5Q13325 482 aaKnown RBP25.67■■□□□ 1.7
CLK3-225ENST00000569063 EPHA10Q5JZY3 1008 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 DCAF8Q5TAQ9 597 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 LMBR1LQ6UX01 489 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 ANKRD2Q9GZV1 360 aa25.67■■□□□ 1.7
CLK3-225ENST00000569063 CNOT7Q9UIV1 285 aaKnown RBP25.67■■□□□ 1.7
CLK3-225ENST00000569063 ZBTB12Q9Y330 459 aaPredicted RBP25.67■■□□□ 1.7
CLK3-225ENST00000569063 RPS12P25398 132 aaKnown RBP25.66■■□□□ 1.7
CLK3-225ENST00000569063 SMC4Q9NTJ3 1288 aa25.66■■□□□ 1.7
CLK3-225ENST00000569063 LEMD3Q9Y2U8 911 aa25.66■■□□□ 1.7
CLK3-225ENST00000569063 MED23Q9ULK4 1368 aa25.66■■□□□ 1.7
CLK3-225ENST00000569063 VIL1P09327 827 aaKnown RBP25.65■■□□□ 1.7
CLK3-225ENST00000569063 H7C1D1 291 aa25.64■■□□□ 1.7
CLK3-225ENST00000569063 NBPF7P0C2Y1 421 aaPredicted RBP25.64■■□□□ 1.7
CLK3-225ENST00000569063 PODNQ7Z5L7 613 aa25.64■■□□□ 1.7
CLK3-225ENST00000569063 MICALL2Q8IY33 904 aa25.64■■□□□ 1.7
CLK3-225ENST00000569063 JMYQ8N9B5 988 aa25.64■■□□□ 1.7
CLK3-225ENST00000569063 PGAP2Q9UHJ9 254 aa25.64■■□□□ 1.7
CLK3-225ENST00000569063 CHMP3Q9Y3E7 222 aa25.64■■□□□ 1.7
CLK3-225ENST00000569063 BRPF1P55201 1214 aaPredicted RBP25.63■■□□□ 1.69
CLK3-225ENST00000569063 CCDC57Q2TAC2 916 aa25.63■■□□□ 1.69
CLK3-225ENST00000569063 KAZALD1Q96I82 304 aa25.63■■□□□ 1.69
CLK3-225ENST00000569063 SHTN1A0MZ66 631 aa25.62■■□□□ 1.69
CLK3-225ENST00000569063 CHRNDQ07001 517 aa25.62■■□□□ 1.69
CLK3-225ENST00000569063 ZC3H15Q8WU90 426 aaKnown RBP25.62■■□□□ 1.69
CLK3-225ENST00000569063 SUCLG2Q96I99 432 aa25.62■■□□□ 1.69
CLK3-225ENST00000569063 SCN9AQ15858 1988 aa25.62■■□□□ 1.69
CLK3-225ENST00000569063 ZNF804BA4D1E1 1349 aa25.62■■□□□ 1.69
CLK3-225ENST00000569063 TMEM88BA6NKF7 163 aa25.61■■□□□ 1.69
CLK3-225ENST00000569063 HIRAP54198 1017 aaPredicted RBP25.61■■□□□ 1.69
CLK3-225ENST00000569063 TRPM4Q8TD43 1214 aa25.6■■□□□ 1.69
CLK3-225ENST00000569063 ZNF609O15014 1411 aa25.6■■□□□ 1.69
CLK3-225ENST00000569063 TXNRD3Q86VQ6 643 aa25.59■■□□□ 1.69
CLK3-225ENST00000569063 COA1Q9GZY4 146 aa25.59■■□□□ 1.69
CLK3-225ENST00000569063 USP44Q9H0E7 712 aa25.59■■□□□ 1.69
CLK3-225ENST00000569063 USP17L3A6NCW0 530 aa25.58■■□□□ 1.69
CLK3-225ENST00000569063 USP17L4A6NCW7 530 aa25.58■■□□□ 1.69
CLK3-225ENST00000569063 RARSP54136 660 aaKnown RBP25.58■■□□□ 1.69
CLK3-225ENST00000569063 RABL6Q3YEC7 729 aaPredicted RBP25.58■■□□□ 1.69
CLK3-225ENST00000569063 TAF7LQ5H9L4 462 aa25.58■■□□□ 1.69
CLK3-225ENST00000569063 RSBN1LQ6PCB5 846 aaPredicted RBP25.58■■□□□ 1.69
CLK3-225ENST00000569063 LDHAL6AQ6ZMR3 332 aa25.58■■□□□ 1.69
CLK3-225ENST00000569063 USP17L1Q7RTZ2 530 aa25.58■■□□□ 1.69
CLK3-225ENST00000569063 AGBL3Q8NEM8 1001 aa25.58■■□□□ 1.69
CLK3-225ENST00000569063 ZNF594Q96JF6 807 aaPredicted RBP25.58■■□□□ 1.69
CLK3-225ENST00000569063 NOB1Q9ULX3 412 aaKnown RBP25.58■■□□□ 1.69
CLK3-225ENST00000569063 SAMD7Q7Z3H4 446 aa25.57■■□□□ 1.68
CLK3-225ENST00000569063 PSME4Q14997 1843 aa25.56■■□□□ 1.68
CLK3-225ENST00000569063 KCNJ4P48050 445 aa25.56■■□□□ 1.68
CLK3-225ENST00000569063 GMLQ99445 158 aa25.56■■□□□ 1.68
CLK3-225ENST00000569063 BICC1Q9H694 974 aaKnown RBP25.56■■□□□ 1.68
CLK3-225ENST00000569063 TAF5LO75529 589 aa25.55■■□□□ 1.68
CLK3-225ENST00000569063 EGFRP00533 1210 aa25.55■■□□□ 1.68
CLK3-225ENST00000569063 KLRK1P26718 216 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms