RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
LYRM1-210ENST00000568820 PIP4K2BP78356 416 aa13.66□□□□□ -0.22
LYRM1-210ENST00000568820 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
LYRM1-210ENST00000568820 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
LYRM1-210ENST00000568820 USP42Q9H9J4 1324 aaKnown RBP13.65□□□□□ -0.22
LYRM1-210ENST00000568820 BCL9O00512 1426 aa13.65□□□□□ -0.22
LYRM1-210ENST00000568820 A0A087WZG4 1122 aa13.65□□□□□ -0.22
LYRM1-210ENST00000568820 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
LYRM1-210ENST00000568820 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
LYRM1-210ENST00000568820 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
LYRM1-210ENST00000568820 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
LYRM1-210ENST00000568820 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
LYRM1-210ENST00000568820 SEPT9Q9UHD8 586 aaPredicted RBP13.65□□□□□ -0.22
LYRM1-210ENST00000568820 GLRX3O76003 335 aaKnown RBP13.64□□□□□ -0.23
LYRM1-210ENST00000568820 DDB1Q16531 1140 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 FAM98CQ17RN3 349 aaKnown RBP13.64□□□□□ -0.23
LYRM1-210ENST00000568820 RABL6Q3YEC7 729 aaPredicted RBP13.64□□□□□ -0.23
LYRM1-210ENST00000568820 NUTM1Q86Y26 1132 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
LYRM1-210ENST00000568820 EPB41L2O43491 1005 aaKnown RBP13.63□□□□□ -0.23
LYRM1-210ENST00000568820 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 NUDT18Q6ZVK8 323 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 UBE3BQ7Z3V4 1068 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
LYRM1-210ENST00000568820 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
LYRM1-210ENST00000568820 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 ZMYND10O75800 440 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 RABEP1Q15276 862 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
LYRM1-210ENST00000568820 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 ECHDC1Q9NTX5 307 aa13.63□□□□□ -0.23
LYRM1-210ENST00000568820 H7C1W4 665 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 MCCP23508 829 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 TSHZ3Q63HK5 1081 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
LYRM1-210ENST00000568820 SPATA31A5Q5VU36 1347 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 SPATA31A7Q8IWB4 1347 aa13.62□□□□□ -0.23
LYRM1-210ENST00000568820 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 SMAPO00193 183 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 CHMLP26374 656 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
LYRM1-210ENST00000568820 KIF2CQ99661 725 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 SLIT2O94813 1529 aa13.61□□□□□ -0.23
LYRM1-210ENST00000568820 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 NWD2Q9ULI1 1742 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 CASP7P55210 303 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
LYRM1-210ENST00000568820 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 AACSQ86V21 672 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 ZBTB3Q9H5J0 574 aa13.6□□□□□ -0.23
LYRM1-210ENST00000568820 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
LYRM1-210ENST00000568820 RBM46Q8TBY0 533 aaKnown RBP13.59□□□□□ -0.23
LYRM1-210ENST00000568820 JCADQ9P266 1359 aa13.59□□□□□ -0.23
LYRM1-210ENST00000568820 SASH1O94885 1247 aa13.59□□□□□ -0.23
LYRM1-210ENST00000568820 OATP04181 439 aa13.59□□□□□ -0.23
LYRM1-210ENST00000568820 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
LYRM1-210ENST00000568820 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
LYRM1-210ENST00000568820 ISCA1Q9BUE6 129 aa13.59□□□□□ -0.23
LYRM1-210ENST00000568820 MAP3K15Q6ZN16 1313 aa13.58□□□□□ -0.24
LYRM1-210ENST00000568820 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
LYRM1-210ENST00000568820 PTPN12Q05209 780 aaKnown RBP13.58□□□□□ -0.24
LYRM1-210ENST00000568820 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
LYRM1-210ENST00000568820 RUFY2Q8WXA3 655 aa13.58□□□□□ -0.24
LYRM1-210ENST00000568820 RNF166Q96A37 237 aaPredicted RBP13.58□□□□□ -0.24
LYRM1-210ENST00000568820 ZFRQ96KR1 1074 aaKnown RBP13.58□□□□□ -0.24
LYRM1-210ENST00000568820 SIL1Q9H173 461 aa13.58□□□□□ -0.24
LYRM1-210ENST00000568820 SLKQ9H2G2 1235 aaPredicted RBP13.58□□□□□ -0.24
LYRM1-210ENST00000568820 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
LYRM1-210ENST00000568820 ITGB4P16144 1822 aa13.58□□□□□ -0.24
LYRM1-210ENST00000568820 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
LYRM1-210ENST00000568820 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
LYRM1-210ENST00000568820 HIP1O00291 1037 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 RFX5P48382 616 aaPredicted RBP13.57□□□□□ -0.24
LYRM1-210ENST00000568820 ANAPC15P60006 121 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 ANTXR1Q9H6X2 564 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
LYRM1-210ENST00000568820 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
LYRM1-210ENST00000568820 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
LYRM1-210ENST00000568820 FOXO4P98177 505 aa13.56□□□□□ -0.24
LYRM1-210ENST00000568820 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
LYRM1-210ENST00000568820 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
LYRM1-210ENST00000568820 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms