RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TSGA10IPQ3SY00 556 aa21.73■■□□□ 1.07
SMPD3-211ENST00000568373 RIC1Q4ADV7 1423 aa21.72■■□□□ 1.07
SMPD3-211ENST00000568373 PDE8AO60658 829 aa21.72■■□□□ 1.07
SMPD3-211ENST00000568373 ITPK1Q13572 414 aa21.72■■□□□ 1.07
SMPD3-211ENST00000568373 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
SMPD3-211ENST00000568373 CCDC158Q5M9N0 1113 aa21.71■■□□□ 1.07
SMPD3-211ENST00000568373 XAGE2Q96GT9 111 aa21.71■■□□□ 1.07
SMPD3-211ENST00000568373 SEC62Q99442 399 aaKnown RBP21.71■■□□□ 1.07
SMPD3-211ENST00000568373 RIPOR2Q9Y4F9 1068 aa21.71■■□□□ 1.07
SMPD3-211ENST00000568373 MYH14Q7Z406 1995 aaKnown RBP21.71■■□□□ 1.07
SMPD3-211ENST00000568373 LDHAL6AQ6ZMR3 332 aa21.71■■□□□ 1.07
SMPD3-211ENST00000568373 CCDC129Q6ZRS4 1044 aa21.71■■□□□ 1.07
SMPD3-211ENST00000568373 SMARCC1Q92922 1105 aaPredicted RBP21.71■■□□□ 1.07
SMPD3-211ENST00000568373 LARP6Q9BRS8 491 aaKnown RBP21.71■■□□□ 1.07
SMPD3-211ENST00000568373 ADORA1P30542 326 aa21.7■■□□□ 1.06
SMPD3-211ENST00000568373 GORABQ5T7V8 394 aa21.7■■□□□ 1.06
SMPD3-211ENST00000568373 MEX3CQ5U5Q3 659 aaKnown RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 ZSCAN31Q96LW9 406 aaPredicted RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 HELLSQ9NRZ9 838 aa21.7■■□□□ 1.06
SMPD3-211ENST00000568373 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 U3KPZ7 1027 aaPredicted RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 FSD2A1L4K1 749 aa21.7■■□□□ 1.06
SMPD3-211ENST00000568373 FAM98CQ17RN3 349 aaKnown RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 L1TD1Q5T7N2 865 aaKnown RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 SH2B1Q9NRF2 756 aaPredicted RBP21.7■■□□□ 1.06
SMPD3-211ENST00000568373 BCL9LQ86UU0 1499 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 VPS72Q15906 364 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 KLHL40Q2TBA0 621 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 METTL24Q5JXM2 366 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 TTC39AQ5SRH9 613 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 AK7Q96M32 723 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 TAF6LQ9Y6J9 622 aa21.69■■□□□ 1.06
SMPD3-211ENST00000568373 KCNQ2O43526 872 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 LARGE1O95461 756 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 KRT32Q14532 448 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 ZMYM1Q5SVZ6 1142 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 LMBRD1Q9NUN5 540 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 GOLGA6L3A6NEY3 463 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 CAMTA2O94983 1202 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 ATP2B3Q16720 1220 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 FOXD4L5Q5VV16 416 aaPredicted RBP21.68■■□□□ 1.06
SMPD3-211ENST00000568373 FOXD4L4Q8WXT5 416 aaPredicted RBP21.68■■□□□ 1.06
SMPD3-211ENST00000568373 CNNM1Q9NRU3 951 aa21.68■■□□□ 1.06
SMPD3-211ENST00000568373 DDX49Q9Y6V7 483 aaKnown RBP21.68■■□□□ 1.06
SMPD3-211ENST00000568373 RPS6KB1P23443 525 aa21.67■■□□□ 1.06
SMPD3-211ENST00000568373 ALDH8A1Q9H2A2 487 aaPredicted RBP21.67■■□□□ 1.06
SMPD3-211ENST00000568373 WDR33Q9C0J8 1336 aaKnown RBP21.67■■□□□ 1.06
SMPD3-211ENST00000568373 ABCC12Q96J65 1359 aa21.67■■□□□ 1.06
SMPD3-211ENST00000568373 SUSD4Q5VX71 490 aa21.67■■□□□ 1.06
SMPD3-211ENST00000568373 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
SMPD3-211ENST00000568373 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
SMPD3-211ENST00000568373 RNF113AO15541 343 aaKnown RBP21.66■■□□□ 1.06
SMPD3-211ENST00000568373 FKBP4Q02790 459 aaKnown RBP eCLIP21.66■■□□□ 1.06
SMPD3-211ENST00000568373 COL9A3Q14050 684 aaPredicted RBP21.66■■□□□ 1.06
SMPD3-211ENST00000568373 ANKRD1Q15327 319 aa21.66■■□□□ 1.06
SMPD3-211ENST00000568373 VGLL2Q8N8G2 317 aa21.66■■□□□ 1.06
SMPD3-211ENST00000568373 LRP5O75197 1615 aa21.66■■□□□ 1.06
SMPD3-211ENST00000568373 SLFNL1Q499Z3 407 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 PARP10Q53GL7 1025 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 FNBP4Q8N3X1 1017 aaPredicted RBP21.65■■□□□ 1.06
SMPD3-211ENST00000568373 UTP14AQ9BVJ6 771 aaKnown RBP21.65■■□□□ 1.06
SMPD3-211ENST00000568373 SMC3Q9UQE7 1217 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 ME3Q16798 604 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 LRRFIP1Q32MZ4 808 aaKnown RBP21.65■■□□□ 1.06
SMPD3-211ENST00000568373 CCDC83Q8IWF9 413 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 DSCC1Q9BVC3 393 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 TPCN1Q9ULQ1 816 aa21.65■■□□□ 1.06
SMPD3-211ENST00000568373 USP21Q9UK80 565 aa21.64■■□□□ 1.05
SMPD3-211ENST00000568373 PRPF40AO75400 957 aaKnown RBP21.64■■□□□ 1.05
SMPD3-211ENST00000568373 CYP21A2P08686 494 aa21.64■■□□□ 1.05
SMPD3-211ENST00000568373 SCARF1Q14162 830 aa21.64■■□□□ 1.05
SMPD3-211ENST00000568373 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.05
SMPD3-211ENST00000568373 ISY1Q9ULR0 285 aaKnown RBP21.64■■□□□ 1.05
SMPD3-211ENST00000568373 MAST3O60307 1309 aa21.63■■□□□ 1.05
SMPD3-211ENST00000568373 PDE8BO95263 885 aa21.63■■□□□ 1.05
SMPD3-211ENST00000568373 AFF2P51816 1311 aa21.62■■□□□ 1.05
SMPD3-211ENST00000568373 HCLS1P14317 486 aaPredicted RBP21.62■■□□□ 1.05
SMPD3-211ENST00000568373 ST3GAL1Q11201 340 aa21.62■■□□□ 1.05
SMPD3-211ENST00000568373 NEK1Q96PY6 1258 aa21.62■■□□□ 1.05
SMPD3-211ENST00000568373 ZFYP08048 801 aaPredicted RBP21.62■■□□□ 1.05
SMPD3-211ENST00000568373 ZNF512BQ96KM6 892 aaPredicted RBP21.62■■□□□ 1.05
SMPD3-211ENST00000568373 TCEANC2Q96MN5 208 aa21.62■■□□□ 1.05
SMPD3-211ENST00000568373 ZAP70P43403 619 aa21.61■■□□□ 1.05
SMPD3-211ENST00000568373 TOB2Q14106 344 aaPredicted RBP21.61■■□□□ 1.05
SMPD3-211ENST00000568373 NIP7Q9Y221 180 aaKnown RBP eCLIP21.61■■□□□ 1.05
SMPD3-211ENST00000568373 DDX60Q8IY21 1712 aaKnown RBP21.61■■□□□ 1.05
SMPD3-211ENST00000568373 AKAP11Q9UKA4 1901 aa21.61■■□□□ 1.05
SMPD3-211ENST00000568373 BCORQ6W2J9 1755 aa21.61■■□□□ 1.05
SMPD3-211ENST00000568373 MROH5Q6ZUA9 1318 aa21.61■■□□□ 1.05
SMPD3-211ENST00000568373 FAM177BA6PVY3 158 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 STX6O43752 255 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 HSPD1P10809 573 aaKnown RBP21.6■■□□□ 1.05
SMPD3-211ENST00000568373 SYT1P21579 422 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 NTSR2O95665 410 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 HSP90B1P14625 803 aaKnown RBP21.6■■□□□ 1.05
SMPD3-211ENST00000568373 GJB2P29033 226 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 NECAB1Q8N987 351 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 OSBP2Q969R2 916 aa21.6■■□□□ 1.05
SMPD3-211ENST00000568373 ZNF652Q9Y2D9 606 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms