RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TAF7LQ5H9L4 462 aa22.44■■□□□ 1.18
COMMD4-222ENST00000568034 MPHOSPH8Q99549 860 aa22.44■■□□□ 1.18
COMMD4-222ENST00000568034 COPRSQ9NQ92 184 aa22.44■■□□□ 1.18
COMMD4-222ENST00000568034 RIPOR2Q9Y4F9 1068 aa22.44■■□□□ 1.18
COMMD4-222ENST00000568034 PRELPP51888 382 aa22.43■■□□□ 1.18
COMMD4-222ENST00000568034 GPSM2P81274 684 aa22.43■■□□□ 1.18
COMMD4-222ENST00000568034 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
COMMD4-222ENST00000568034 GRIN3BO60391 1043 aa22.42■■□□□ 1.18
COMMD4-222ENST00000568034 LDHAL6AQ6ZMR3 332 aa22.42■■□□□ 1.18
COMMD4-222ENST00000568034 RPAP2Q8IXW5 612 aaPredicted RBP22.42■■□□□ 1.18
COMMD4-222ENST00000568034 PCDHB15Q9Y5E8 787 aa22.42■■□□□ 1.18
COMMD4-222ENST00000568034 LTBP3Q9NS15 1303 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 EYA2O00167 538 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 RASSF7Q02833 373 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 CHRNDQ07001 517 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 ATG9AQ7Z3C6 839 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 RTKN2Q8IZC4 609 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 RTFDC1Q9BY42 306 aaPredicted RBP22.41■■□□□ 1.18
COMMD4-222ENST00000568034 PODXL2Q9NZ53 605 aa22.41■■□□□ 1.18
COMMD4-222ENST00000568034 FKBP4Q02790 459 aaKnown RBP eCLIP22.4■■□□□ 1.18
COMMD4-222ENST00000568034 GRIPAP1Q4V328 841 aa22.4■■□□□ 1.18
COMMD4-222ENST00000568034 ARHGAP27Q6ZUM4 889 aa22.4■■□□□ 1.18
COMMD4-222ENST00000568034 MPNDQ8N594 471 aa22.4■■□□□ 1.18
COMMD4-222ENST00000568034 PSMD1Q99460 953 aa22.4■■□□□ 1.18
COMMD4-222ENST00000568034 CNNM1Q9NRU3 951 aa22.4■■□□□ 1.18
COMMD4-222ENST00000568034 XDHP47989 1333 aa22.39■■□□□ 1.18
COMMD4-222ENST00000568034 CIAO1O76071 339 aa22.39■■□□□ 1.17
COMMD4-222ENST00000568034 VGLL2Q8N8G2 317 aa22.39■■□□□ 1.17
COMMD4-222ENST00000568034 SIL1Q9H173 461 aa22.39■■□□□ 1.17
COMMD4-222ENST00000568034 TAOK3Q9H2K8 898 aa22.39■■□□□ 1.17
COMMD4-222ENST00000568034 FBXO3Q9UK99 471 aa22.39■■□□□ 1.17
COMMD4-222ENST00000568034 NSFL1CQ9UNZ2 370 aaKnown RBP22.39■■□□□ 1.17
COMMD4-222ENST00000568034 WTIPA6NIX2 430 aaPredicted RBP22.38■■□□□ 1.17
COMMD4-222ENST00000568034 AAMPQ13685 434 aa22.38■■□□□ 1.17
COMMD4-222ENST00000568034 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
COMMD4-222ENST00000568034 POLLQ9UGP5 575 aa22.38■■□□□ 1.17
COMMD4-222ENST00000568034 SBF1O95248 1867 aa22.38■■□□□ 1.17
COMMD4-222ENST00000568034 HELBQ8NG08 1087 aaPredicted RBP22.37■■□□□ 1.17
COMMD4-222ENST00000568034 TBC1D16Q8TBP0 767 aa22.37■■□□□ 1.17
COMMD4-222ENST00000568034 ANKRD2Q9GZV1 360 aa22.37■■□□□ 1.17
COMMD4-222ENST00000568034 TMX4Q9H1E5 349 aaPredicted RBP22.37■■□□□ 1.17
COMMD4-222ENST00000568034 NOP58Q9Y2X3 529 aaKnown RBP22.37■■□□□ 1.17
COMMD4-222ENST00000568034 COL4A5P29400 1685 aa22.36■■□□□ 1.17
COMMD4-222ENST00000568034 MROH5Q6ZUA9 1318 aa22.36■■□□□ 1.17
COMMD4-222ENST00000568034 TAF5LO75529 589 aa22.36■■□□□ 1.17
COMMD4-222ENST00000568034 ANKIB1Q9P2G1 1089 aa22.36■■□□□ 1.17
COMMD4-222ENST00000568034 SNAP23O00161 211 aa22.35■■□□□ 1.17
COMMD4-222ENST00000568034 IL15P40933 162 aaPredicted RBP22.35■■□□□ 1.17
COMMD4-222ENST00000568034 GPR101Q96P66 508 aaPredicted RBP22.35■■□□□ 1.17
COMMD4-222ENST00000568034 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
COMMD4-222ENST00000568034 GGA1Q9UJY5 639 aa22.35■■□□□ 1.17
COMMD4-222ENST00000568034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.35■■□□□ 1.17
COMMD4-222ENST00000568034 IRS2Q9Y4H2 1338 aa22.34■■□□□ 1.17
COMMD4-222ENST00000568034 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
COMMD4-222ENST00000568034 HMMRO75330 724 aa22.34■■□□□ 1.17
COMMD4-222ENST00000568034 UFL1O94874 794 aa22.34■■□□□ 1.17
COMMD4-222ENST00000568034 ATP2B4P23634 1241 aa22.34■■□□□ 1.17
COMMD4-222ENST00000568034 METTL24Q5JXM2 366 aa22.34■■□□□ 1.17
COMMD4-222ENST00000568034 CCDC88AQ3V6T2 1871 aa22.33■■□□□ 1.17
COMMD4-222ENST00000568034 SURF6O75683 361 aaKnown RBP22.33■■□□□ 1.17
COMMD4-222ENST00000568034 LEMD3Q9Y2U8 911 aa22.33■■□□□ 1.17
COMMD4-222ENST00000568034 ZNF804BA4D1E1 1349 aa22.32■■□□□ 1.16
COMMD4-222ENST00000568034 SASH1O94885 1247 aa22.32■■□□□ 1.16
COMMD4-222ENST00000568034 PDE8BO95263 885 aa22.32■■□□□ 1.16
COMMD4-222ENST00000568034 KLRK1P26718 216 aa22.32■■□□□ 1.16
COMMD4-222ENST00000568034 IARSP41252 1262 aaKnown RBP22.32■■□□□ 1.16
COMMD4-222ENST00000568034 SUPT20HQ8NEM7 779 aa22.32■■□□□ 1.16
COMMD4-222ENST00000568034 EXOC6BQ9Y2D4 811 aa22.32■■□□□ 1.16
COMMD4-222ENST00000568034 DICER1Q9UPY3 1922 aaKnown RBP22.31■■□□□ 1.16
COMMD4-222ENST00000568034 MED23Q9ULK4 1368 aa22.31■■□□□ 1.16
COMMD4-222ENST00000568034 C6orf229H3BNL8 230 aa22.31■■□□□ 1.16
COMMD4-222ENST00000568034 LMNB1P20700 586 aa22.31■■□□□ 1.16
COMMD4-222ENST00000568034 FGFR2P21802 821 aa22.31■■□□□ 1.16
COMMD4-222ENST00000568034 KIAA2012Q0VF49 1180 aa22.31■■□□□ 1.16
COMMD4-222ENST00000568034 TFCP2Q12800 502 aa22.3■■□□□ 1.16
COMMD4-222ENST00000568034 G3BP1Q13283 466 aaKnown RBP eCLIP22.3■■□□□ 1.16
COMMD4-222ENST00000568034 AOC3Q16853 763 aa22.3■■□□□ 1.16
COMMD4-222ENST00000568034 TXNRD3Q86VQ6 643 aa22.3■■□□□ 1.16
COMMD4-222ENST00000568034 PPIP5K2O43314 1243 aa22.29■■□□□ 1.16
COMMD4-222ENST00000568034 HDAC1Q13547 482 aaPredicted RBP22.29■■□□□ 1.16
COMMD4-222ENST00000568034 UBE4AQ14139 1066 aa22.29■■□□□ 1.16
COMMD4-222ENST00000568034 C9orf131Q5VYM1 1079 aa22.29■■□□□ 1.16
COMMD4-222ENST00000568034 C15orf52Q6ZUT6 534 aaKnown RBP22.29■■□□□ 1.16
COMMD4-222ENST00000568034 VPS33BQ9H267 617 aa22.29■■□□□ 1.16
COMMD4-222ENST00000568034 CEP126Q9P2H0 1117 aa22.29■■□□□ 1.16
COMMD4-222ENST00000568034 TIAM2Q8IVF5 1701 aa22.28■■□□□ 1.16
COMMD4-222ENST00000568034 WASHC4Q2M389 1173 aa22.28■■□□□ 1.16
COMMD4-222ENST00000568034 EYA3Q99504 573 aa22.28■■□□□ 1.16
COMMD4-222ENST00000568034 DCTPP1Q9H773 170 aa22.28■■□□□ 1.16
COMMD4-222ENST00000568034 ZNF609O15014 1411 aa22.28■■□□□ 1.16
COMMD4-222ENST00000568034 RIMBP2O15034 1052 aa22.27■■□□□ 1.16
COMMD4-222ENST00000568034 KCNJ4P48050 445 aa22.27■■□□□ 1.16
COMMD4-222ENST00000568034 PUM3Q15397 648 aaKnown RBP22.27■■□□□ 1.16
COMMD4-222ENST00000568034 ARAP2Q8WZ64 1704 aa22.27■■□□□ 1.16
COMMD4-222ENST00000568034 RNF181Q9P0P0 153 aa22.27■■□□□ 1.16
COMMD4-222ENST00000568034 CHD4Q14839 1912 aa22.27■■□□□ 1.16
COMMD4-222ENST00000568034 YY1P25490 414 aa22.26■■□□□ 1.15
COMMD4-222ENST00000568034 LARGE2Q8N3Y3 721 aa22.26■■□□□ 1.15
COMMD4-222ENST00000568034 OS9Q13438 667 aaPredicted RBP22.25■■□□□ 1.15
COMMD4-222ENST00000568034 ATP2B3Q16720 1220 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms