RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 DDX17Q92841 729 aaKnown RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 PHACTR3Q96KR7 559 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 AGBL1Q96MI9 1066 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 LMO7Q8WWI1 1683 aa7.5□□□□□ -1.21
SF3B3-210ENST00000567654 FAM208AQ9UK61 1670 aaKnown RBP7.5□□□□□ -1.21
SF3B3-210ENST00000567654 USP17L5A8MUK1 530 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 PLIN1O60240 522 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 STAU1O95793 577 aaKnown RBP7.49□□□□□ -1.21
SF3B3-210ENST00000567654 AVPP01185 164 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 DHX9Q08211 1270 aaKnown RBP7.49□□□□□ -1.21
SF3B3-210ENST00000567654 NCOA4Q13772 614 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 LAPTM4AQ15012 233 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 CCDC27Q2M243 656 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 PPP1R12CQ9BZL4 782 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 NCOA3Q9Y6Q9 1424 aa7.49□□□□□ -1.21
SF3B3-210ENST00000567654 SIPA1L3O60292 1781 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-210ENST00000567654 FLT4P35916 1363 aa7.48□□□□□ -1.21
SF3B3-210ENST00000567654 FOXO3O43524 673 aa7.48□□□□□ -1.21
SF3B3-210ENST00000567654 ATP9BO43861 1147 aa7.48□□□□□ -1.21
SF3B3-210ENST00000567654 C19orf44Q9H6X5 657 aa7.48□□□□□ -1.21
SF3B3-210ENST00000567654 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
SF3B3-210ENST00000567654 MAPK8IP3Q9UPT6 1336 aa7.48□□□□□ -1.21
SF3B3-210ENST00000567654 KDM3BQ7LBC6 1761 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 E9PSI1 815 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 AXIN1O15169 862 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 LMOD1P29536 600 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-210ENST00000567654 HOXC9P31274 260 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 PSME1Q06323 249 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 C20orf194Q5TEA3 1177 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 USP17L2Q6R6M4 530 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 CCDC97Q96F63 343 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-210ENST00000567654 MAFBQ9Y5Q3 323 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-210ENST00000567654 LTBP4Q8N2S1 1624 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 ROBO1Q9Y6N7 1651 aa7.47□□□□□ -1.21
SF3B3-210ENST00000567654 ARHGEF10O15013 1369 aa7.46□□□□□ -1.21
SF3B3-210ENST00000567654 SCN11AQ9UI33 1791 aa7.46□□□□□ -1.21
SF3B3-210ENST00000567654 RIPK4P57078 832 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 ERVK-9P63128 1117 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 RELBQ01201 579 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 C6orf118Q5T5N4 469 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 SULT6B1Q6IMI4 303 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 KRT28Q7Z3Y7 464 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 TRIM46Q7Z4K8 759 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 WDR63Q8IWG1 891 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 NGEFQ8N5V2 710 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 EXOC6Q8TAG9 804 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
SF3B3-210ENST00000567654 THUMPD2Q9BTF0 503 aaKnown RBP7.46□□□□□ -1.22
SF3B3-210ENST00000567654 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 SHANK3Q9BYB0 1731 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 USP19O94966 1318 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 FANCIQ9NVI1 1328 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 CACNA1FO60840 1977 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 RTL1A6NKG5 1358 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 KDRP35968 1356 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 MSH6P52701 1360 aa7.46□□□□□ -1.22
SF3B3-210ENST00000567654 FAM83GA6ND36 823 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 BCAR3O75815 825 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 ATF3P18847 181 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 MEIOBQ8N635 442 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 ZNF395Q9H8N7 513 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-210ENST00000567654 RAB6BQ9NRW1 208 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 PPP4R2Q9NY27 417 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 IGSF1Q8N6C5 1336 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 KIF24Q5T7B8 1368 aa7.45□□□□□ -1.22
SF3B3-210ENST00000567654 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 TNS3Q68CZ2 1445 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 PKD1L3Q7Z443 1732 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 WNK3Q9BYP7 1800 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 AMPHP49418 695 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 DCTN1Q14203 1278 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 EML3Q32P44 896 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 MAP7D1Q3KQU3 841 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 Q6ZVU0 165 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 KDF1Q8NAX2 398 aaPredicted RBP7.44□□□□□ -1.22
SF3B3-210ENST00000567654 NFATC2IPQ8NCF5 419 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 PURBQ96QR8 312 aaKnown RBP7.44□□□□□ -1.22
SF3B3-210ENST00000567654 CRBNQ96SW2 442 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 TNNQ9UQP3 1299 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 NCAPD2Q15021 1401 aa7.44□□□□□ -1.22
SF3B3-210ENST00000567654 N4BP2Q86UW6 1770 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-210ENST00000567654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-210ENST00000567654 ZBTB7CA1YPR0 619 aa7.43□□□□□ -1.22
SF3B3-210ENST00000567654 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-210ENST00000567654 ADH1AP07327 375 aa7.43□□□□□ -1.22
SF3B3-210ENST00000567654 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
SF3B3-210ENST00000567654 CTC1Q2NKJ3 1217 aa7.43□□□□□ -1.22
SF3B3-210ENST00000567654 ERICH6BQ5W0A0 696 aa7.43□□□□□ -1.22
SF3B3-210ENST00000567654 BRINP3Q76B58 766 aa7.43□□□□□ -1.22
SF3B3-210ENST00000567654 USHBP1Q8N6Y0 703 aa7.43□□□□□ -1.22
SF3B3-210ENST00000567654 LTV1Q96GA3 475 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms