RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CACNA1FO60840 1977 aa23.84■■□□□ 1.41
LINC01238-205ENST00000567549 YDJCA8MPS7 323 aa23.84■■□□□ 1.41
LINC01238-205ENST00000567549 UFL1O94874 794 aa23.84■■□□□ 1.41
LINC01238-205ENST00000567549 TWISTNBQ3B726 338 aaPredicted RBP23.84■■□□□ 1.41
LINC01238-205ENST00000567549 CAPNS2Q96L46 248 aa23.84■■□□□ 1.41
LINC01238-205ENST00000567549 MRS2Q9HD23 443 aa23.84■■□□□ 1.41
LINC01238-205ENST00000567549 XDHP47989 1333 aa23.84■■□□□ 1.41
LINC01238-205ENST00000567549 PSMD14O00487 310 aa23.83■■□□□ 1.41
LINC01238-205ENST00000567549 CELF2O95319 508 aaKnown RBP23.83■■□□□ 1.41
LINC01238-205ENST00000567549 PI4KAP2A4QPH2 592 aa23.82■■□□□ 1.4
LINC01238-205ENST00000567549 TRAF5O00463 557 aa23.82■■□□□ 1.4
LINC01238-205ENST00000567549 MAP2K2P36507 400 aa23.82■■□□□ 1.4
LINC01238-205ENST00000567549 PI4KAP1Q8N8J0 262 aa23.82■■□□□ 1.4
LINC01238-205ENST00000567549 MYH3P11055 1940 aa23.82■■□□□ 1.4
LINC01238-205ENST00000567549 ATP2B4P23634 1241 aa23.81■■□□□ 1.4
LINC01238-205ENST00000567549 CTSWP56202 376 aa23.81■■□□□ 1.4
LINC01238-205ENST00000567549 TSR2Q969E8 191 aaKnown RBP23.81■■□□□ 1.4
LINC01238-205ENST00000567549 DCPSQ96C86 337 aaKnown RBP23.81■■□□□ 1.4
LINC01238-205ENST00000567549 GPR101Q96P66 508 aaPredicted RBP23.81■■□□□ 1.4
LINC01238-205ENST00000567549 MYH16Q9H6N6 1097 aa23.81■■□□□ 1.4
LINC01238-205ENST00000567549 SEC31BQ9NQW1 1179 aa23.81■■□□□ 1.4
LINC01238-205ENST00000567549 CST9Q5W186 159 aa23.8■■□□□ 1.4
LINC01238-205ENST00000567549 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
LINC01238-205ENST00000567549 GLIS2Q9BZE0 524 aaPredicted RBP23.8■■□□□ 1.4
LINC01238-205ENST00000567549 CA12O43570 354 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 CAPN15O75808 1086 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 SLC4A2P04920 1241 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 GRM1Q13255 1194 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 DOK7Q18PE1 504 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 SAPCD2Q86UD0 394 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 TRPM4Q8TD43 1214 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 ZBTB12Q9Y330 459 aaPredicted RBP23.79■■□□□ 1.4
LINC01238-205ENST00000567549 THSD7BQ9C0I4 1608 aa23.79■■□□□ 1.4
LINC01238-205ENST00000567549 WDR63Q8IWG1 891 aa23.78■■□□□ 1.4
LINC01238-205ENST00000567549 AGBL3Q8NEM8 1001 aa23.78■■□□□ 1.4
LINC01238-205ENST00000567549 ZNF408Q9H9D4 720 aa23.78■■□□□ 1.4
LINC01238-205ENST00000567549 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
LINC01238-205ENST00000567549 VIL1P09327 827 aaKnown RBP23.77■■□□□ 1.4
LINC01238-205ENST00000567549 PODNQ7Z5L7 613 aa23.77■■□□□ 1.4
LINC01238-205ENST00000567549 BSDC1Q9NW68 430 aaPredicted RBP23.77■■□□□ 1.4
LINC01238-205ENST00000567549 ZNF609O15014 1411 aa23.76■■□□□ 1.39
LINC01238-205ENST00000567549 IGHMBP2P38935 993 aaKnown RBP23.76■■□□□ 1.39
LINC01238-205ENST00000567549 LBX1P52954 281 aa23.76■■□□□ 1.39
LINC01238-205ENST00000567549 HIRAP54198 1017 aaPredicted RBP23.76■■□□□ 1.39
LINC01238-205ENST00000567549 CYP4F22Q6NT55 531 aa23.76■■□□□ 1.39
LINC01238-205ENST00000567549 KRT26Q7Z3Y9 468 aa23.76■■□□□ 1.39
LINC01238-205ENST00000567549 NEURL1BA8MQ27 555 aa23.75■■□□□ 1.39
LINC01238-205ENST00000567549 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
LINC01238-205ENST00000567549 FLIIQ13045 1269 aa23.75■■□□□ 1.39
LINC01238-205ENST00000567549 FKBP5Q13451 457 aaPredicted RBP23.75■■□□□ 1.39
LINC01238-205ENST00000567549 KIF4BQ2VIQ3 1234 aa23.75■■□□□ 1.39
LINC01238-205ENST00000567549 TBC1D10BQ4KMP7 808 aaPredicted RBP23.75■■□□□ 1.39
LINC01238-205ENST00000567549 SULF1Q8IWU6 871 aa23.75■■□□□ 1.39
LINC01238-205ENST00000567549 CCDC85AQ96PX6 553 aaPredicted RBP23.75■■□□□ 1.39
LINC01238-205ENST00000567549 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
LINC01238-205ENST00000567549 MMP14P50281 582 aa23.74■■□□□ 1.39
LINC01238-205ENST00000567549 FMR1Q06787 632 aaKnown RBP eCLIP23.74■■□□□ 1.39
LINC01238-205ENST00000567549 SAMD7Q7Z3H4 446 aa23.74■■□□□ 1.39
LINC01238-205ENST00000567549 C2orf69Q8N8R5 385 aa23.74■■□□□ 1.39
LINC01238-205ENST00000567549 TTLL11Q8NHH1 800 aa23.74■■□□□ 1.39
LINC01238-205ENST00000567549 NOGQ13253 232 aa23.73■■□□□ 1.39
LINC01238-205ENST00000567549 RSBN1LQ6PCB5 846 aaPredicted RBP23.73■■□□□ 1.39
LINC01238-205ENST00000567549 UBE3BQ7Z3V4 1068 aa23.73■■□□□ 1.39
LINC01238-205ENST00000567549 USP48Q86UV5 1035 aa23.73■■□□□ 1.39
LINC01238-205ENST00000567549 MED23Q9ULK4 1368 aa23.73■■□□□ 1.39
LINC01238-205ENST00000567549 USP17L3A6NCW0 530 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 USP17L4A6NCW7 530 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 HSPA8P11142 646 aaKnown RBP23.72■■□□□ 1.39
LINC01238-205ENST00000567549 BRPF1P55201 1214 aaPredicted RBP23.72■■□□□ 1.39
LINC01238-205ENST00000567549 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 RBM26Q5T8P6 1007 aaKnown RBP23.72■■□□□ 1.39
LINC01238-205ENST00000567549 USP17L1Q7RTZ2 530 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 LINS1Q8NG48 757 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 DNAAF4Q8WXU2 420 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 ANKRD2Q9GZV1 360 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 MYO3BQ8WXR4 1341 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 FANCIQ9NVI1 1328 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 PSME4Q14997 1843 aa23.72■■□□□ 1.39
LINC01238-205ENST00000567549 H7C1W4 665 aa23.71■■□□□ 1.39
LINC01238-205ENST00000567549 HUNKP57058 714 aa23.71■■□□□ 1.39
LINC01238-205ENST00000567549 GCKRQ14397 625 aa23.71■■□□□ 1.39
LINC01238-205ENST00000567549 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
LINC01238-205ENST00000567549 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
LINC01238-205ENST00000567549 MPHOSPH8Q99549 860 aa23.71■■□□□ 1.39
LINC01238-205ENST00000567549 PLA2G12BQ9BX93 195 aa23.71■■□□□ 1.39
LINC01238-205ENST00000567549 LEMD3Q9Y2U8 911 aa23.71■■□□□ 1.39
LINC01238-205ENST00000567549 OGFOD1Q8N543 542 aa23.7■■□□□ 1.38
LINC01238-205ENST00000567549 GREM2Q9H772 168 aa23.7■■□□□ 1.38
LINC01238-205ENST00000567549 GBA2Q9HCG7 927 aaPredicted RBP23.7■■□□□ 1.38
LINC01238-205ENST00000567549 COL4A1P02462 1669 aa23.7■■□□□ 1.38
LINC01238-205ENST00000567549 SHTN1A0MZ66 631 aa23.69■■□□□ 1.38
LINC01238-205ENST00000567549 USP17L8P0C7I0 530 aa23.69■■□□□ 1.38
LINC01238-205ENST00000567549 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
LINC01238-205ENST00000567549 ZNF280AP59817 542 aaPredicted RBP23.69■■□□□ 1.38
LINC01238-205ENST00000567549 CCDC102AQ96A19 550 aa23.69■■□□□ 1.38
LINC01238-205ENST00000567549 MINPP1Q9UNW1 487 aa23.69■■□□□ 1.38
LINC01238-205ENST00000567549 SCN9AQ15858 1988 aa23.69■■□□□ 1.38
LINC01238-205ENST00000567549 COA1Q9GZY4 146 aa23.68■■□□□ 1.38
LINC01238-205ENST00000567549 KCNQ5Q9NR82 932 aa23.68■■□□□ 1.38
LINC01238-205ENST00000567549 GGA3Q9NZ52 723 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms