RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
KARS-207ENST00000566560 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 LRRC37AA6NMS7 1700 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 A0A0G2JLW4 131 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 STK25O00506 426 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 STYK1Q6J9G0 422 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 DDX46Q7L014 1031 aaKnown RBP14.36□□□□□ -0.11
KARS-207ENST00000566560 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 TTLL11Q8NHH1 800 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
KARS-207ENST00000566560 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.11
KARS-207ENST00000566560 RBM17Q96I25 401 aaKnown RBP14.36□□□□□ -0.11
KARS-207ENST00000566560 GREM2Q9H772 168 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
KARS-207ENST00000566560 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
KARS-207ENST00000566560 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
KARS-207ENST00000566560 LMBR1LQ6UX01 489 aa14.35□□□□□ -0.11
KARS-207ENST00000566560 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
KARS-207ENST00000566560 CSF1RP07333 972 aa14.34□□□□□ -0.11
KARS-207ENST00000566560 HOXA10P31260 410 aaPredicted RBP14.34□□□□□ -0.11
KARS-207ENST00000566560 CNKSR1Q969H4 720 aa14.34□□□□□ -0.11
KARS-207ENST00000566560 A0A1B0GUL6 1792 aa14.34□□□□□ -0.11
KARS-207ENST00000566560 KCNA3P22001 575 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 ITGA6P23229 1130 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 GRAPQ13588 217 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
KARS-207ENST00000566560 GRAPLQ8TC17 118 aaPredicted RBP14.33□□□□□ -0.12
KARS-207ENST00000566560 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 CRAMP1Q96RY5 1269 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 CDC5LQ99459 802 aaKnown RBP14.33□□□□□ -0.12
KARS-207ENST00000566560 SEC31BQ9NQW1 1179 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
KARS-207ENST00000566560 ANKRD18BA2A2Z9 1011 aa14.32□□□□□ -0.12
KARS-207ENST00000566560 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
KARS-207ENST00000566560 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
KARS-207ENST00000566560 PSEN1P49768 467 aa14.32□□□□□ -0.12
KARS-207ENST00000566560 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
KARS-207ENST00000566560 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
KARS-207ENST00000566560 TTLL6Q8N841 843 aa14.32□□□□□ -0.12
KARS-207ENST00000566560 CELF1Q92879 486 aaKnown RBP14.32□□□□□ -0.12
KARS-207ENST00000566560 SRGAP3O43295 1099 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 NEFLP07196 543 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 MTX1Q13505 466 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 DALRD3Q5D0E6 543 aaKnown RBP14.31□□□□□ -0.12
KARS-207ENST00000566560 TAF7LQ5H9L4 462 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
KARS-207ENST00000566560 IGHMBP2P38935 993 aaKnown RBP14.3□□□□□ -0.12
KARS-207ENST00000566560 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
KARS-207ENST00000566560 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
KARS-207ENST00000566560 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
KARS-207ENST00000566560 SRCAPQ6ZRS2 3230 aa14.3□□□□□ -0.12
KARS-207ENST00000566560 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
KARS-207ENST00000566560 TMC4Q7Z404 712 aa14.29□□□□□ -0.12
KARS-207ENST00000566560 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
KARS-207ENST00000566560 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
KARS-207ENST00000566560 LTBP1Q14766 1721 aa14.29□□□□□ -0.12
KARS-207ENST00000566560 BBOX1O75936 387 aa14.28□□□□□ -0.12
KARS-207ENST00000566560 RFX5P48382 616 aaPredicted RBP14.28□□□□□ -0.12
KARS-207ENST00000566560 RPS8P62241 208 aaKnown RBP14.28□□□□□ -0.12
KARS-207ENST00000566560 AAMPQ13685 434 aa14.28□□□□□ -0.12
KARS-207ENST00000566560 FER1L6Q2WGJ9 1857 aa14.28□□□□□ -0.12
KARS-207ENST00000566560 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
KARS-207ENST00000566560 MPHOSPH8Q99549 860 aa14.28□□□□□ -0.12
KARS-207ENST00000566560 ATP8B2P98198 1209 aa14.27□□□□□ -0.13
KARS-207ENST00000566560 SLC51AQ86UW1 340 aa14.27□□□□□ -0.13
KARS-207ENST00000566560 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.13
KARS-207ENST00000566560 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.13
KARS-207ENST00000566560 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
KARS-207ENST00000566560 DUOX1Q9NRD9 1551 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 C21orf2O43822 256 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 HMMRO75330 724 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 CCDC93Q567U6 631 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 CNNM1Q9NRU3 951 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 BSDC1Q9NW68 430 aaPredicted RBP14.26□□□□□ -0.13
KARS-207ENST00000566560 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
KARS-207ENST00000566560 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
KARS-207ENST00000566560 YBX3P16989 372 aaKnown RBP eCLIP14.25□□□□□ -0.137e-13■■□□□ 13.1
KARS-207ENST00000566560 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
KARS-207ENST00000566560 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 LDHAL6AQ6ZMR3 332 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 SP8Q8IXZ3 490 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 SSH3Q8TE77 659 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 C7orf43Q8WVR3 580 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 SIL1Q9H173 461 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
KARS-207ENST00000566560 GALR2O43603 387 aaPredicted RBP14.24□□□□□ -0.13
KARS-207ENST00000566560 GPR162Q16538 588 aa14.24□□□□□ -0.13
KARS-207ENST00000566560 CC2D2BQ6DHV5 1058 aa14.24□□□□□ -0.13
KARS-207ENST00000566560 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
KARS-207ENST00000566560 PUS3Q9BZE2 481 aaKnown RBP14.24□□□□□ -0.13
KARS-207ENST00000566560 PCDHB15Q9Y5E8 787 aa14.24□□□□□ -0.13
KARS-207ENST00000566560 XDHP47989 1333 aa14.23□□□□□ -0.13
KARS-207ENST00000566560 EYA2O00167 538 aa14.23□□□□□ -0.13
KARS-207ENST00000566560 CIAO1O76071 339 aa14.23□□□□□ -0.13
KARS-207ENST00000566560 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms