RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 CWC25Q9NXE8 425 aaPredicted RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 CHMP3Q9Y3E7 222 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 SALL3Q9BXA9 1300 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 MYH14Q7Z406 1995 aaKnown RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 FAM177BA6PVY3 158 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 MX1P20591 662 aa7.66□□□□□ -1.18
CHD9-217ENST00000565832 ZNF594Q96JF6 807 aaPredicted RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 NOP58Q9Y2X3 529 aaKnown RBP7.66□□□□□ -1.18
CHD9-217ENST00000565832 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.65□□□□□ -1.18
CHD9-217ENST00000565832 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
CHD9-217ENST00000565832 SEPT12Q8IYM1 358 aa7.65□□□□□ -1.18
CHD9-217ENST00000565832 RILPL2Q969X0 211 aa7.65□□□□□ -1.18
CHD9-217ENST00000565832 ISCA1Q9BUE6 129 aa7.65□□□□□ -1.18
CHD9-217ENST00000565832 CCDC8Q9H0W5 538 aaPredicted RBP7.65□□□□□ -1.18
CHD9-217ENST00000565832 PALLDQ8WX93 1383 aa7.65□□□□□ -1.19
CHD9-217ENST00000565832 RAB11FIP3O75154 756 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 RFX5P48382 616 aaPredicted RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 PTPN12Q05209 780 aaKnown RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 TYW1BQ6NUM6 668 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 GIGYF2Q6Y7W6 1299 aaKnown RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 DZIP3Q86Y13 1208 aaKnown RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 CCDC191Q8NCU4 936 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 EAF2Q96CJ1 260 aaPredicted RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 KIF1BPQ96EK5 621 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 TBC1D32Q96NH3 1257 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 C22orf23Q9BZE7 217 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 OSBPL3Q9H4L5 887 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 MAP3K15Q6ZN16 1313 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 SRCAPQ6ZRS2 3230 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 TRIM6-TRIM34B2RNG4 842 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 POTEJP0CG39 1038 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 EIF5P55010 431 aaKnown RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 G3BP1Q13283 466 aaKnown RBP eCLIP7.64□□□□□ -1.19
CHD9-217ENST00000565832 RABL6Q3YEC7 729 aaPredicted RBP7.64□□□□□ -1.19
CHD9-217ENST00000565832 AMIGO3Q86WK7 504 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 LINC00116Q8NCU8 138 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 CCDC87Q9NVE4 849 aa7.64□□□□□ -1.19
CHD9-217ENST00000565832 NUP188Q5SRE5 1749 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 IL6STP40189 918 aaPredicted RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 TFCP2Q12800 502 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 PI4K2BQ8TCG2 481 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 PUS3Q9BZE2 481 aaKnown RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 ONECUT3O60422 494 aaPredicted RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 CDC45O75419 566 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 LRRC24Q50LG9 513 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 AACSQ86V21 672 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 NLRP10Q86W26 655 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 CLASRPQ8N2M8 674 aaKnown RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 REPIN1Q9BWE0 567 aaKnown RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 IL25Q9H293 177 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 UPF2Q9HAU5 1272 aaKnown RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 STAP2Q9UGK3 403 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 TRPC5Q9UL62 973 aaPredicted RBP7.63□□□□□ -1.19
CHD9-217ENST00000565832 HDAC5Q9UQL6 1122 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 NDUFB9Q9Y6M9 179 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 UBN2Q6ZU65 1347 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 TJP1Q07157 1748 aa7.63□□□□□ -1.19
CHD9-217ENST00000565832 TIMM10P62072 90 aa7.62□□□□□ -1.19
CHD9-217ENST00000565832 KHSRPQ92945 711 aaKnown RBP eCLIP7.62□□□□□ -1.192e-7■■■■□ 24.3
CHD9-217ENST00000565832 FBXW7Q969H0 707 aa7.62□□□□□ -1.19
CHD9-217ENST00000565832 TRMT112Q9UI30 125 aaKnown RBP7.62□□□□□ -1.19
CHD9-217ENST00000565832 NUP98P52948 1817 aa7.62□□□□□ -1.19
CHD9-217ENST00000565832 IFIT2P09913 472 aaKnown RBP7.61□□□□□ -1.19
CHD9-217ENST00000565832 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
CHD9-217ENST00000565832 FOSBP53539 338 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 TRIM28Q13263 835 aaKnown RBP7.61□□□□□ -1.19
CHD9-217ENST00000565832 HSP90AB4PQ58FF6 505 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 SUSD4Q5VX71 490 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 ATG9AQ7Z3C6 839 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 ZBTB38Q8NAP3 1195 aaPredicted RBP7.61□□□□□ -1.19
CHD9-217ENST00000565832 PHOX2BQ99453 314 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 COPRSQ9NQ92 184 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 CAMTA2O94983 1202 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 NUDT7P0C024 238 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 ZNF34Q8IZ26 560 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
CHD9-217ENST00000565832 EDC3Q96F86 508 aaKnown RBP7.61□□□□□ -1.19
CHD9-217ENST00000565832 KIF2CQ99661 725 aa7.61□□□□□ -1.19
CHD9-217ENST00000565832 POTEB2H3BUK9 544 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 PCCAP05165 728 aaPredicted RBP7.6□□□□□ -1.19
CHD9-217ENST00000565832 BICDL1Q6ZP65 573 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 ZNF454Q8N9F8 522 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 BOLA2Q9H3K6 86 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 GREM2Q9H772 168 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 LRRC4BQ9NT99 713 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 ERVV-1B6SEH8 477 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 IRS4O14654 1257 aaPredicted RBP7.6□□□□□ -1.19
CHD9-217ENST00000565832 TRIM37O94972 964 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 CHGBP05060 677 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 HOXB3P14651 431 aaPredicted RBP7.6□□□□□ -1.19
CHD9-217ENST00000565832 CHMLP26374 656 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 ARSIQ5FYB1 569 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 ERC1Q8IUD2 1116 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 TTLL11Q8NHH1 800 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 USP26Q9BXU7 913 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 ECHDC1Q9NTX5 307 aa7.6□□□□□ -1.19
CHD9-217ENST00000565832 SRP68Q9UHB9 627 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms