RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 MPHOSPH8Q99549 860 aa17.32■□□□□ 0.36
CCNDBP1-206ENST00000565296 LRRC37AA6NMS7 1700 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 ATP8B2P98198 1209 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 LDHAL6AQ6ZMR3 332 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 RTKN2Q8IZC4 609 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
CCNDBP1-206ENST00000565296 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 POLA2Q14181 598 aa17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 SIRT2Q8IXJ6 389 aa17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 CHMP4BQ9H444 224 aaKnown RBP17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 COPRSQ9NQ92 184 aa17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 LTBP3Q9NS15 1303 aa17.3■□□□□ 0.36
CCNDBP1-206ENST00000565296 DUOX1Q9NRD9 1551 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 MPNDQ8N594 471 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 SSH3Q8TE77 659 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 PSMD1Q99460 953 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
CCNDBP1-206ENST00000565296 CHRNDQ07001 517 aa17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 CNNM1Q9NRU3 951 aa17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 LTBP1Q14766 1721 aa17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
CCNDBP1-206ENST00000565296 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
CCNDBP1-206ENST00000565296 EYA2O00167 538 aa17.27■□□□□ 0.36
CCNDBP1-206ENST00000565296 HELBQ8NG08 1087 aaPredicted RBP17.27■□□□□ 0.36
CCNDBP1-206ENST00000565296 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.36
CCNDBP1-206ENST00000565296 CCDC136Q96JN2 1154 aa17.27■□□□□ 0.36
CCNDBP1-206ENST00000565296 SIL1Q9H173 461 aa17.27■□□□□ 0.36
CCNDBP1-206ENST00000565296 XDHP47989 1333 aa17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 SNAP23O00161 211 aa17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 TAF5LO75529 589 aa17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 SPEF2Q9C093 1822 aa17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
CCNDBP1-206ENST00000565296 CIAO1O76071 339 aa17.25■□□□□ 0.35
CCNDBP1-206ENST00000565296 LMNB1P20700 586 aa17.25■□□□□ 0.35
CCNDBP1-206ENST00000565296 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
CCNDBP1-206ENST00000565296 MROH5Q6ZUA9 1318 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 UFL1O94874 794 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 COL4A5P29400 1685 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 C6orf229H3BNL8 230 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
CCNDBP1-206ENST00000565296 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 KLRK1P26718 216 aa17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 AOC3Q16853 763 aa17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 LEMD3Q9Y2U8 911 aa17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-206ENST00000565296 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
CCNDBP1-206ENST00000565296 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
CCNDBP1-206ENST00000565296 PDE8BO95263 885 aa17.22■□□□□ 0.35
CCNDBP1-206ENST00000565296 IL15P40933 162 aaPredicted RBP17.22■□□□□ 0.35
CCNDBP1-206ENST00000565296 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
CCNDBP1-206ENST00000565296 RNF181Q9P0P0 153 aa17.22■□□□□ 0.35
CCNDBP1-206ENST00000565296 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 TXNRD3Q86VQ6 643 aa17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 SASH1O94885 1247 aa17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
CCNDBP1-206ENST00000565296 HMMRO75330 724 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 FGFR2P21802 821 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 TFCP2Q12800 502 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 AAMPQ13685 434 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 EYA3Q99504 573 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 SBF1O95248 1867 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 A0A1B0GUL6 1792 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 KCNJ4P48050 445 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 G3BP1Q13283 466 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 ZC3H12CQ9C0D7 883 aaKnown RBP17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
CCNDBP1-206ENST00000565296 UBE4AQ14139 1066 aa17.18■□□□□ 0.34
CCNDBP1-206ENST00000565296 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
CCNDBP1-206ENST00000565296 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms