RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SPEF2Q9C093 1822 aa23.23■■□□□ 1.31
SYNGR3-204ENST00000564642 ITGA6P23229 1130 aa23.22■■□□□ 1.31
SYNGR3-204ENST00000564642 LMOD1P29536 600 aaPredicted RBP23.22■■□□□ 1.31
SYNGR3-204ENST00000564642 CXCL9Q07325 125 aa23.22■■□□□ 1.31
SYNGR3-204ENST00000564642 ZC3H12CQ9C0D7 883 aaKnown RBP23.22■■□□□ 1.31
SYNGR3-204ENST00000564642 BSDC1Q9NW68 430 aaPredicted RBP23.22■■□□□ 1.31
SYNGR3-204ENST00000564642 UFL1O94874 794 aa23.21■■□□□ 1.31
SYNGR3-204ENST00000564642 EPHX2P34913 555 aa23.21■■□□□ 1.31
SYNGR3-204ENST00000564642 HNRNPUQ00839 825 aaKnown RBP eCLIP23.21■■□□□ 1.31
SYNGR3-204ENST00000564642 CIAPIN1Q6FI81 312 aa23.21■■□□□ 1.31
SYNGR3-204ENST00000564642 LTBP1Q14766 1721 aa23.21■■□□□ 1.31
SYNGR3-204ENST00000564642 XDHP47989 1333 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 G3V3G9 751 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 TNIP1Q15025 636 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 FAM161AQ3B820 660 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 EAPPQ56P03 285 aaPredicted RBP23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 DCAF8Q5TAQ9 597 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 CHADLQ6NUI6 762 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 PNMA8AQ86V59 439 aaPredicted RBP23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 MPHOSPH8Q99549 860 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 CHMP3Q9Y3E7 222 aa23.2■■□□□ 1.3
SYNGR3-204ENST00000564642 ANKRD18BA2A2Z9 1011 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 RAD17O75943 681 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 ATP2B4P23634 1241 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 FOXO4P98177 505 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 DBNDD1Q9H9R9 158 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 MINPP1Q9UNW1 487 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 CLEC11AQ9Y240 323 aa23.19■■□□□ 1.3
SYNGR3-204ENST00000564642 POTEIP0CG38 1075 aa23.18■■□□□ 1.3
SYNGR3-204ENST00000564642 POTEJP0CG39 1038 aa23.18■■□□□ 1.3
SYNGR3-204ENST00000564642 IFIT5Q13325 482 aaKnown RBP23.18■■□□□ 1.3
SYNGR3-204ENST00000564642 DOK7Q18PE1 504 aa23.18■■□□□ 1.3
SYNGR3-204ENST00000564642 LDHDQ86WU2 507 aa23.18■■□□□ 1.3
SYNGR3-204ENST00000564642 GPR101Q96P66 508 aaPredicted RBP23.18■■□□□ 1.3
SYNGR3-204ENST00000564642 YDJCA8MPS7 323 aa23.17■■□□□ 1.3
SYNGR3-204ENST00000564642 SCNN1DP51172 638 aa23.17■■□□□ 1.3
SYNGR3-204ENST00000564642 LMBR1LQ6UX01 489 aa23.17■■□□□ 1.3
SYNGR3-204ENST00000564642 ECE2O60344 883 aa23.16■■□□□ 1.3
SYNGR3-204ENST00000564642 EPS15P42566 896 aa23.16■■□□□ 1.3
SYNGR3-204ENST00000564642 CCDC57Q2TAC2 916 aa23.15■■□□□ 1.3
SYNGR3-204ENST00000564642 NOB1Q9ULX3 412 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-204ENST00000564642 NBPF7P0C2Y1 421 aaPredicted RBP23.14■■□□□ 1.29
SYNGR3-204ENST00000564642 GMPSP49915 693 aaPredicted RBP23.14■■□□□ 1.29
SYNGR3-204ENST00000564642 TAF7LQ5H9L4 462 aa23.14■■□□□ 1.29
SYNGR3-204ENST00000564642 EPHA10Q5JZY3 1008 aa23.14■■□□□ 1.29
SYNGR3-204ENST00000564642 ANKRD2Q9GZV1 360 aa23.14■■□□□ 1.29
SYNGR3-204ENST00000564642 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.29
SYNGR3-204ENST00000564642 UTYO14607 1347 aa23.13■■□□□ 1.29
SYNGR3-204ENST00000564642 CCT4P50991 539 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-204ENST00000564642 RARSP54136 660 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-204ENST00000564642 BRPF1P55201 1214 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-204ENST00000564642 SUCLG2Q96I99 432 aa23.13■■□□□ 1.29
SYNGR3-204ENST00000564642 PSMD14O00487 310 aa23.12■■□□□ 1.29
SYNGR3-204ENST00000564642 USP50Q70EL3 339 aaPredicted RBP23.12■■□□□ 1.29
SYNGR3-204ENST00000564642 API5Q9BZZ5 524 aaKnown RBP23.12■■□□□ 1.29
SYNGR3-204ENST00000564642 LEMD3Q9Y2U8 911 aa23.12■■□□□ 1.29
SYNGR3-204ENST00000564642 HTRA3P83110 453 aa23.11■■□□□ 1.29
SYNGR3-204ENST00000564642 ADARB2Q9NS39 739 aaKnown RBP23.11■■□□□ 1.29
SYNGR3-204ENST00000564642 CHRNDQ07001 517 aa23.1■■□□□ 1.29
SYNGR3-204ENST00000564642 JMYQ8N9B5 988 aa23.1■■□□□ 1.29
SYNGR3-204ENST00000564642 KCNQ5Q9NR82 932 aa23.1■■□□□ 1.29
SYNGR3-204ENST00000564642 PCDH10Q9P2E7 1040 aa23.1■■□□□ 1.29
SYNGR3-204ENST00000564642 ZBTB12Q9Y330 459 aaPredicted RBP23.1■■□□□ 1.29
SYNGR3-204ENST00000564642 ADAMTSL1Q8N6G6 1762 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 WTIPA6NIX2 430 aaPredicted RBP23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 H7C1D1 291 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 KCNJ4P48050 445 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 LDHAL6AQ6ZMR3 332 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 KLRG1Q96E93 195 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 KAZALD1Q96I82 304 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 USP44Q9H0E7 712 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 CNOT7Q9UIV1 285 aaKnown RBP23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 MED23Q9ULK4 1368 aa23.09■■□□□ 1.29
SYNGR3-204ENST00000564642 ZNF804BA4D1E1 1349 aa23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 KIF16BQ96L93 1317 aa23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 MAP1SQ66K74 1059 aaPredicted RBP23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 CNTROBQ8N137 903 aa23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 DPF2Q92785 391 aa23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 ZNF594Q96JF6 807 aaPredicted RBP23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 BICC1Q9H694 974 aaKnown RBP23.08■■□□□ 1.29
SYNGR3-204ENST00000564642 RPS12P25398 132 aaKnown RBP23.07■■□□□ 1.28
SYNGR3-204ENST00000564642 ARHGAP45Q92619 1136 aa23.07■■□□□ 1.28
SYNGR3-204ENST00000564642 CNNM1Q9NRU3 951 aa23.07■■□□□ 1.28
SYNGR3-204ENST00000564642 SCN9AQ15858 1988 aa23.07■■□□□ 1.28
SYNGR3-204ENST00000564642 VIL1P09327 827 aaKnown RBP23.06■■□□□ 1.28
SYNGR3-204ENST00000564642 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
SYNGR3-204ENST00000564642 IPO8O15397 1037 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-204ENST00000564642 TAF5LO75529 589 aa23.05■■□□□ 1.28
SYNGR3-204ENST00000564642 ITGBL1O95965 494 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-204ENST00000564642 HELBQ8NG08 1087 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-204ENST00000564642 COA1Q9GZY4 146 aa23.05■■□□□ 1.28
SYNGR3-204ENST00000564642 ZBED9Q6R2W3 1325 aa23.05■■□□□ 1.28
SYNGR3-204ENST00000564642 PLIN1O60240 522 aa23.04■■□□□ 1.28
SYNGR3-204ENST00000564642 RABL6Q3YEC7 729 aaPredicted RBP23.04■■□□□ 1.28
SYNGR3-204ENST00000564642 PASKQ96RG2 1323 aa23.04■■□□□ 1.28
SYNGR3-204ENST00000564642 PSME4Q14997 1843 aa23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
SYNGR3-204ENST00000564642 BCAR3O75815 825 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms