RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 MASTLQ96GX5 879 aa15.74■□□□□ 0.11
CLK3-214ENST00000564096 CRAMP1Q96RY5 1269 aa15.74■□□□□ 0.11
CLK3-214ENST00000564096 FPGT-TNNI3KV9GXZ4 949 aa15.74■□□□□ 0.11
CLK3-214ENST00000564096 ANKRD31Q8N7Z5 1873 aa15.74■□□□□ 0.11
CLK3-214ENST00000564096 H0YIN7 160 aa15.73■□□□□ 0.11
CLK3-214ENST00000564096 PDE4AP27815 886 aa15.73■□□□□ 0.11
CLK3-214ENST00000564096 PUM3Q15397 648 aaKnown RBP15.73■□□□□ 0.11
CLK3-214ENST00000564096 C2CD5Q86YS7 1000 aa15.73■□□□□ 0.11
CLK3-214ENST00000564096 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
CLK3-214ENST00000564096 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
CLK3-214ENST00000564096 TMX4Q9H1E5 349 aaPredicted RBP15.73■□□□□ 0.11
CLK3-214ENST00000564096 RIPOR2Q9Y4F9 1068 aa15.73■□□□□ 0.11
CLK3-214ENST00000564096 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
CLK3-214ENST00000564096 COL11A2P13942 1736 aaPredicted RBP15.72■□□□□ 0.11
CLK3-214ENST00000564096 SRGNP10124 158 aa15.72■□□□□ 0.11
CLK3-214ENST00000564096 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
CLK3-214ENST00000564096 STYK1Q6J9G0 422 aa15.72■□□□□ 0.11
CLK3-214ENST00000564096 ANKRD2Q9GZV1 360 aa15.72■□□□□ 0.11
CLK3-214ENST00000564096 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
CLK3-214ENST00000564096 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
CLK3-214ENST00000564096 ERC2O15083 957 aa15.71■□□□□ 0.11
CLK3-214ENST00000564096 BBOX1O75936 387 aa15.71■□□□□ 0.11
CLK3-214ENST00000564096 PDE8BO95263 885 aa15.71■□□□□ 0.11
CLK3-214ENST00000564096 CHRNDQ07001 517 aa15.71■□□□□ 0.11
CLK3-214ENST00000564096 ATP2B3Q16720 1220 aa15.71■□□□□ 0.11
CLK3-214ENST00000564096 SPEF2Q9C093 1822 aa15.71■□□□□ 0.1
CLK3-214ENST00000564096 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
CLK3-214ENST00000564096 SLC5A1P13866 664 aa15.7■□□□□ 0.1
CLK3-214ENST00000564096 KCNJ4P48050 445 aa15.7■□□□□ 0.1
CLK3-214ENST00000564096 PLEKHM2Q8IWE5 1019 aa15.7■□□□□ 0.1
CLK3-214ENST00000564096 CNKSR1Q969H4 720 aa15.7■□□□□ 0.1
CLK3-214ENST00000564096 SALL3Q9BXA9 1300 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 A0A1B0GUL7 405 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 IFIT1P09914 478 aaKnown RBP15.69■□□□□ 0.1
CLK3-214ENST00000564096 PDE1AP54750 535 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 SKAP1Q86WV1 359 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 LPIN2Q92539 896 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.13e-15■□□□□ 10.1
CLK3-214ENST00000564096 EAF2Q96CJ1 260 aaPredicted RBP15.69■□□□□ 0.1
CLK3-214ENST00000564096 NEUROD6Q96NK8 337 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 OSBPL3Q9H4L5 887 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 ECHDC1Q9NTX5 307 aa15.69■□□□□ 0.1
CLK3-214ENST00000564096 COL4A1P02462 1669 aa15.68■□□□□ 0.1
CLK3-214ENST00000564096 GLRX3O76003 335 aaKnown RBP15.68■□□□□ 0.1
CLK3-214ENST00000564096 OTUD7AQ8TE49 926 aaPredicted RBP15.68■□□□□ 0.1
CLK3-214ENST00000564096 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
CLK3-214ENST00000564096 MINPP1Q9UNW1 487 aa15.68■□□□□ 0.1
CLK3-214ENST00000564096 KIF13BQ9NQT8 1826 aa15.68■□□□□ 0.1
CLK3-214ENST00000564096 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
CLK3-214ENST00000564096 XDHP47989 1333 aa15.68■□□□□ 0.1
CLK3-214ENST00000564096 TGFB2P61812 414 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 UBE4AQ14139 1066 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 CCDC158Q5M9N0 1113 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 TTC22Q5TAA0 569 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 C16orf71Q8IYS4 520 aaPredicted RBP15.67■□□□□ 0.1
CLK3-214ENST00000564096 CCDC8Q9H0W5 538 aaPredicted RBP15.67■□□□□ 0.1
CLK3-214ENST00000564096 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 DBNLQ9UJU6 430 aaKnown RBP15.67■□□□□ 0.1
CLK3-214ENST00000564096 ARAP2Q8WZ64 1704 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 DLEC1Q9Y238 1755 aa15.67■□□□□ 0.1
CLK3-214ENST00000564096 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
CLK3-214ENST00000564096 TLR7Q9NYK1 1049 aaKnown RBP15.66■□□□□ 0.1
CLK3-214ENST00000564096 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
CLK3-214ENST00000564096 CD2APQ9Y5K6 639 aa15.66■□□□□ 0.1
CLK3-214ENST00000564096 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 TAF5LO75529 589 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 CHRNA5P30532 468 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 PTGER2P43116 358 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 TTC39AQ5SRH9 613 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 PRPF40BQ6NWY9 871 aaKnown RBP15.65■□□□□ 0.1
CLK3-214ENST00000564096 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
CLK3-214ENST00000564096 XAGE2Q96GT9 111 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 DBNDD2Q9BQY9 259 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 LEMD3Q9Y2U8 911 aa15.65■□□□□ 0.1
CLK3-214ENST00000564096 FGFR2P21802 821 aa15.64■□□□□ 0.09
CLK3-214ENST00000564096 ATP2B4P23634 1241 aa15.64■□□□□ 0.09
CLK3-214ENST00000564096 CC2D2BQ6DHV5 1058 aa15.64■□□□□ 0.09
CLK3-214ENST00000564096 PPP1R1BQ9UD71 204 aaPredicted RBP15.64■□□□□ 0.09
CLK3-214ENST00000564096 GGA1Q9UJY5 639 aa15.64■□□□□ 0.09
CLK3-214ENST00000564096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.64■□□□□ 0.09
CLK3-214ENST00000564096 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
CLK3-214ENST00000564096 UQCRFS1P1P0C7P4 283 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 ATP5JP18859 108 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 TIMM10P62072 90 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 GRIPAP1Q4V328 841 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 CAVIN4Q5BKX8 364 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 SOGA3Q5TF21 947 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 CNTROBQ8N137 903 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 PI4K2BQ8TCG2 481 aa15.63■□□□□ 0.09
CLK3-214ENST00000564096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLK3-214ENST00000564096 GNL3LQ9NVN8 582 aaKnown RBP15.63■□□□□ 0.09
CLK3-214ENST00000564096 PODXL2Q9NZ53 605 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms