RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 NEUROD6Q96NK8 337 aa10.62□□□□□ -0.71
CLUHP3-206ENST00000562354 CYP27B1O15528 508 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 SYT1P21579 422 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 PROSER3Q2NL68 480 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 SRRTQ9BXP5 876 aaKnown RBP10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 RGPD8O14715 1765 aaPredicted RBP10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 PRAMEF22A3QJZ6 481 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 AKAP17AQ02040 695 aaKnown RBP10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 GBP3Q9H0R5 595 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 ERBB4Q15303 1308 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
CLUHP3-206ENST00000562354 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 CDKL5O76039 1030 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 SERPINC1P01008 464 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 HSPA4P34932 840 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 AK2P54819 239 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 SMARCE1Q969G3 411 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 ZNF830Q96NB3 372 aaPredicted RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 FILIP1LQ4L180 1135 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 CKAP2LQ8IYA6 745 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 JARID2Q92833 1246 aaPredicted RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 GTF2E1P29083 439 aaPredicted RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 STK3Q13188 491 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 SOS2Q07890 1332 aaPredicted RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 DDIT3P35638 169 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 DNM1Q05193 864 aaKnown RBP10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 ANO6Q4KMQ2 910 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 TIGD1Q96MW7 591 aa10.6□□□□□ -0.71
CLUHP3-206ENST00000562354 KIF1AQ12756 1690 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 SLU7O95391 586 aaKnown RBP10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 CD2BP2O95400 341 aaKnown RBP10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 SNW1Q13573 536 aaKnown RBP10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 SYCP1Q15431 976 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 POTEB2H3BUK9 544 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 SGSM2O43147 1006 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 DDB1Q16531 1140 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 SSH3Q8TE77 659 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 PA2G4Q9UQ80 394 aaKnown RBP10.59□□□□□ -0.71
CLUHP3-206ENST00000562354 KCNA4P22459 653 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 TMEM87AQ8NBN3 555 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 ERO1AQ96HE7 468 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 DACT1Q9NYF0 836 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 BICC1Q9H694 974 aaKnown RBP10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 CPDO75976 1380 aa10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 CEBPZQ03701 1054 aaKnown RBP10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
CLUHP3-206ENST00000562354 NFAT5O94916 1531 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 SKILP12757 684 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 FAM177BA6PVY3 158 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 A1BGP04217 495 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 CYP2E1P05181 493 aaPredicted RBP10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 TUBB4BP68371 445 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 JAKMIP3Q5VZ66 844 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 PDILTQ8N807 584 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 DDX11Q96FC9 970 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 SUCLG2Q96I99 432 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 NOL10Q9BSC4 688 aaKnown RBP10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 XBP1P17861 261 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 PTGS1P23219 599 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 GCKRQ14397 625 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 HSP90AB3PQ58FF7 597 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 RUFY3Q7L099 469 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 FBXW7Q969H0 707 aa10.57□□□□□ -0.72
CLUHP3-206ENST00000562354 DMTNQ08495 405 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 FSIP1Q8NA03 581 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 FOSBP53539 338 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 NFXL1Q6ZNB6 911 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 TXLNBQ8N3L3 684 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 CCDC85AQ96PX6 553 aaPredicted RBP10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 CLSTN2Q9H4D0 955 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 SNX14Q9Y5W7 946 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 LMBR1LQ6UX01 489 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 KIF2CQ99661 725 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 BOLA2Q9H3K6 86 aa10.56□□□□□ -0.72
CLUHP3-206ENST00000562354 ERICH2A1L162 156 aa10.55□□□□□ -0.72
CLUHP3-206ENST00000562354 GPTP24298 496 aa10.55□□□□□ -0.72
CLUHP3-206ENST00000562354 WASHC4Q2M389 1173 aa10.55□□□□□ -0.72
CLUHP3-206ENST00000562354 TFIP11Q9UBB9 837 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms