RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 SKOR2Q2VWA4 1001 aaPredicted RBP15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 EDC3Q96F86 508 aaKnown RBP15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 HELLSQ9NRZ9 838 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 CYP46A1Q9Y6A2 500 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 RTL9Q8NET4 1388 aa15.18■□□□□ 0.02
AC055717.2-201ENST00000561864 SLC27A2O14975 620 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 TAF5LO75529 589 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 IFIT1P09914 478 aaKnown RBP15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 KRT32Q14532 448 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 TSGA10IPQ3SY00 556 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 USPL1Q5W0Q7 1092 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 GJD4Q96KN9 370 aaPredicted RBP15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 GREM2Q9H772 168 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 RIPOR2Q9Y4F9 1068 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
AC055717.2-201ENST00000561864 BTAF1O14981 1849 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 GOLIM4O00461 696 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 TRAK2O60296 914 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 RXRBP28702 533 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 ATP2B3Q16720 1220 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 METTL24Q5JXM2 366 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 ZSCAN31Q96LW9 406 aaPredicted RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 LIMCH1Q9UPQ0 1083 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 MYH14Q7Z406 1995 aaKnown RBP15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 ATRNO75882 1429 aa15.16■□□□□ 0.02
AC055717.2-201ENST00000561864 AK2P54819 239 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 RBM6P78332 1123 aaKnown RBP15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 GORABQ5T7V8 394 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 LDHAL6AQ6ZMR3 332 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 ALDH8A1Q9H2A2 487 aaPredicted RBP15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 SH2B1Q9NRF2 756 aaPredicted RBP15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 PDRG1Q9NUG6 133 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 KAT6BQ8WYB5 2073 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 MROH5Q6ZUA9 1318 aa15.15■□□□□ 0.02
AC055717.2-201ENST00000561864 KCNQ2O43526 872 aa15.14■□□□□ 0.01
AC055717.2-201ENST00000561864 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
AC055717.2-201ENST00000561864 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
AC055717.2-201ENST00000561864 SYNE4Q8N205 404 aa15.14■□□□□ 0.01
AC055717.2-201ENST00000561864 VGLL2Q8N8G2 317 aa15.14■□□□□ 0.01
AC055717.2-201ENST00000561864 CCDC85AQ96PX6 553 aaPredicted RBP15.14■□□□□ 0.01
AC055717.2-201ENST00000561864 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 ADORA1P30542 326 aa15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 ANKRD1Q15327 319 aa15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 CLEC4GQ6UXB4 293 aa15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 LINC00116Q8NCU8 138 aa15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 DSCC1Q9BVC3 393 aa15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
AC055717.2-201ENST00000561864 LY75O60449 1722 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 COL24A1Q17RW2 1714 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 NTSR2O95665 410 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 BRD1O95696 1058 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 RPS6KB1P23443 525 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 ZDHHC9Q9Y397 364 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 NDUFB9Q9Y6M9 179 aa15.12■□□□□ 0.01
AC055717.2-201ENST00000561864 MYH7P12883 1935 aa15.11■□□□□ 0.01
AC055717.2-201ENST00000561864 PDE8BO95263 885 aa15.11■□□□□ 0.01
AC055717.2-201ENST00000561864 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
AC055717.2-201ENST00000561864 CCDC152Q4G0S7 254 aa15.11■□□□□ 0.01
AC055717.2-201ENST00000561864 NIP7Q9Y221 180 aaKnown RBP eCLIP15.11■□□□□ 0.01
AC055717.2-201ENST00000561864 UQCRFS1P1P0C7P4 283 aa15.1■□□□□ 0.01
AC055717.2-201ENST00000561864 PKP1Q13835 747 aa15.1■□□□□ 0.01
AC055717.2-201ENST00000561864 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
AC055717.2-201ENST00000561864 MAST3O60307 1309 aa15.1■□□□□ 0.01
AC055717.2-201ENST00000561864 WDR33Q9C0J8 1336 aaKnown RBP15.1■□□□□ 0.01
AC055717.2-201ENST00000561864 HCLS1P14317 486 aaPredicted RBP15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 CPA1P15085 419 aa15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 TTF1Q15361 905 aaPredicted RBP15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 CCDC129Q6ZRS4 1044 aa15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 LPIN2Q92539 896 aa15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 SEC62Q99442 399 aaKnown RBP15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 ISY1Q9ULR0 285 aaKnown RBP15.09■□□□□ 0.01
AC055717.2-201ENST00000561864 SBF2Q86WG5 1849 aa15.08■□□□□ 0.01
AC055717.2-201ENST00000561864 AKAP11Q9UKA4 1901 aa15.08■□□□□ 0
AC055717.2-201ENST00000561864 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
AC055717.2-201ENST00000561864 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
AC055717.2-201ENST00000561864 PDIA4P13667 645 aaKnown RBP15.08■□□□□ 0
AC055717.2-201ENST00000561864 SLC5A1P13866 664 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms