RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF831Q5JPB2 1677 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 COL15A1P39059 1388 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 FZD9O00144 591 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 FKBP4Q02790 459 aaKnown RBP eCLIP7.39□□□□□ -1.23
HERC1-213ENST00000561359 MAP2K5Q13163 448 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 NOGQ13253 232 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 STYK1Q6J9G0 422 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 ZNF530Q6P9A1 599 aaPredicted RBP7.39□□□□□ -1.23
HERC1-213ENST00000561359 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
HERC1-213ENST00000561359 NFATC2IPQ8NCF5 419 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 MASTLQ96GX5 879 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 HHIPL1Q96JK4 782 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 PUS7Q96PZ0 661 aaKnown RBP7.39□□□□□ -1.23
HERC1-213ENST00000561359 ZNF408Q9H9D4 720 aa7.39□□□□□ -1.23
HERC1-213ENST00000561359 DAXXQ9UER7 740 aaPredicted RBP7.39□□□□□ -1.23
HERC1-213ENST00000561359 FER1L6Q2WGJ9 1857 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 ADAMTSL1Q8N6G6 1762 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 DLEC1Q9Y238 1755 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 NCAPD2Q15021 1401 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 ST20-MTHFSA0A0A6YYL1 179 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 DDX11L8A8MPP1 907 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 TRPA1O75762 1119 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 SRGNP10124 158 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 EPS15P42566 896 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 MTHFSP49914 203 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
HERC1-213ENST00000561359 AKAP4Q5JQC9 854 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 PRR5LQ6MZQ0 368 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 SLC17A8Q8NDX2 589 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 JDP2Q8WYK2 163 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 ZIC5Q96T25 663 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 CARD11Q9BXL7 1154 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 ZBTB1Q9Y2K1 713 aa7.38□□□□□ -1.23
HERC1-213ENST00000561359 AFDNP55196 1824 aaKnown RBP7.38□□□□□ -1.23
HERC1-213ENST00000561359 RGS20O76081 388 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 SLC10A3P09131 477 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 CYP19A1P11511 503 aaPredicted RBP7.37□□□□□ -1.23
HERC1-213ENST00000561359 IARSP41252 1262 aaKnown RBP7.37□□□□□ -1.23
HERC1-213ENST00000561359 ST5P78524 1137 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 PLEKHO1Q53GL0 409 aaPredicted RBP7.37□□□□□ -1.23
HERC1-213ENST00000561359 C1orf141Q5JVX7 400 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 TBC1D9BQ66K14 1250 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 USP50Q70EL3 339 aaPredicted RBP7.37□□□□□ -1.23
HERC1-213ENST00000561359 RTKN2Q8IZC4 609 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 CNBD1Q8NA66 436 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 SAGE1Q9NXZ1 904 aa7.37□□□□□ -1.23
HERC1-213ENST00000561359 NRXN2Q9P2S2 1712 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 IRF6O14896 467 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 ACTN4O43707 911 aaKnown RBP7.36□□□□□ -1.23
HERC1-213ENST00000561359 CANXP27824 592 aaKnown RBP7.36□□□□□ -1.23
HERC1-213ENST00000561359 SCNN1DP51172 638 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 HUNKP57058 714 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 OLFM4Q6UX06 510 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 SYNE4Q8N205 404 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 KRI1Q8N9T8 703 aaKnown RBP7.36□□□□□ -1.23
HERC1-213ENST00000561359 C7orf43Q8WVR3 580 aa7.36□□□□□ -1.23
HERC1-213ENST00000561359 WASHC2AQ641Q2 1341 aa7.35□□□□□ -1.23
HERC1-213ENST00000561359 SETDB2Q96T68 719 aa7.35□□□□□ -1.23
HERC1-213ENST00000561359 PHOX2BQ99453 314 aa7.35□□□□□ -1.23
HERC1-213ENST00000561359 GLIS2Q9BZE0 524 aaPredicted RBP7.35□□□□□ -1.23
HERC1-213ENST00000561359 RNF186Q9NXI6 227 aa7.35□□□□□ -1.23
HERC1-213ENST00000561359 ZNF330Q9Y3S2 320 aaPredicted RBP7.35□□□□□ -1.23
HERC1-213ENST00000561359 SLX4Q8IY92 1834 aa7.35□□□□□ -1.23
HERC1-213ENST00000561359 SZT2Q5T011 3432 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 A0A087WZG4 1122 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 NPR1P16066 1061 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 GGCXP38435 758 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 PKN2Q16513 984 aaKnown RBP7.34□□□□□ -1.23
HERC1-213ENST00000561359 AMOTQ4VCS5 1084 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 NKX2-3Q8TAU0 364 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 ADARB2Q9NS39 739 aaKnown RBP7.34□□□□□ -1.23
HERC1-213ENST00000561359 HDAC9Q9UKV0 1011 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 TRIOBPQ9H2D6 2365 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 ADAMTS7Q9UKP4 1686 aa7.34□□□□□ -1.23
HERC1-213ENST00000561359 NR1I2O75469 434 aa7.33□□□□□ -1.24
HERC1-213ENST00000561359 KIF23Q02241 960 aaPredicted RBP7.33□□□□□ -1.24
HERC1-213ENST00000561359 SLC39A6Q13433 755 aa7.33□□□□□ -1.24
HERC1-213ENST00000561359 NEUROD1Q13562 356 aa7.33□□□□□ -1.24
HERC1-213ENST00000561359 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
HERC1-213ENST00000561359 PPP1R18Q6NYC8 613 aa7.33□□□□□ -1.24
HERC1-213ENST00000561359 NPM2Q86SE8 214 aaKnown RBP7.33□□□□□ -1.24
HERC1-213ENST00000561359 CCDC102AQ96A19 550 aa7.33□□□□□ -1.24
HERC1-213ENST00000561359 TBC1D2BQ9UPU7 963 aa7.33□□□□□ -1.24
HERC1-213ENST00000561359 TRPM7Q96QT4 1865 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 STARD3NLO95772 234 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 ZNF157P51786 506 aaPredicted RBP7.32□□□□□ -1.24
HERC1-213ENST00000561359 EIF5P55010 431 aaKnown RBP7.32□□□□□ -1.24
HERC1-213ENST00000561359 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
HERC1-213ENST00000561359 PUS10Q3MIT2 529 aaKnown RBP7.32□□□□□ -1.24
HERC1-213ENST00000561359 RGMBQ6NW40 437 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 CDC37L1Q7L3B6 337 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 NBPF5PQ86XG9 351 aaPredicted RBP7.32□□□□□ -1.24
HERC1-213ENST00000561359 LARGE2Q8N3Y3 721 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
HERC1-213ENST00000561359 TJP1Q07157 1748 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 ANKRD31Q8N7Z5 1873 aa7.32□□□□□ -1.24
HERC1-213ENST00000561359 FAM155AB1AL88 458 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms