RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 SUPT20HQ8NEM7 779 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 CELF1Q92879 486 aaKnown RBP8.85□□□□□ -0.99
SPG11-224ENST00000561268 FAM89AQ96GI7 184 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 HACL1Q9UJ83 578 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 AKAP11Q9UKA4 1901 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 IRS4O14654 1257 aaPredicted RBP8.84□□□□□ -0.99
SPG11-224ENST00000561268 PPIP5K2O43314 1243 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
SPG11-224ENST00000561268 ITGBL1O95965 494 aaPredicted RBP8.84□□□□□ -0.99
SPG11-224ENST00000561268 EPHX2P34913 555 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 AOC3Q16853 763 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 KSR2Q6VAB6 950 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 JDP2Q8WYK2 163 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 PLA2G12BQ9BX93 195 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 CWC25Q9NXE8 425 aaPredicted RBP8.84□□□□□ -0.99
SPG11-224ENST00000561268 PODXL2Q9NZ53 605 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 CNTNAP1P78357 1384 aa8.84□□□□□ -0.99
SPG11-224ENST00000561268 OTOFQ9HC10 1997 aa8.83□□□□□ -1
SPG11-224ENST00000561268 PI4KAP2A4QPH2 592 aa8.83□□□□□ -1
SPG11-224ENST00000561268 YDJCA8MPS7 323 aa8.83□□□□□ -1
SPG11-224ENST00000561268 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
SPG11-224ENST00000561268 ELL2O00472 640 aaPredicted RBP8.83□□□□□ -1
SPG11-224ENST00000561268 PDE8AO60658 829 aa8.83□□□□□ -1
SPG11-224ENST00000561268 VAMP4O75379 141 aa8.83□□□□□ -1
SPG11-224ENST00000561268 NEFLP07196 543 aa8.83□□□□□ -1
SPG11-224ENST00000561268 HSP90B1P14625 803 aaKnown RBP8.83□□□□□ -1
SPG11-224ENST00000561268 CASP7P55210 303 aa8.83□□□□□ -1
SPG11-224ENST00000561268 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
SPG11-224ENST00000561268 HTRA3P83110 453 aa8.83□□□□□ -1
SPG11-224ENST00000561268 FLIIQ13045 1269 aa8.83□□□□□ -1
SPG11-224ENST00000561268 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
SPG11-224ENST00000561268 G2E3Q7L622 706 aa8.83□□□□□ -1
SPG11-224ENST00000561268 PNMA8AQ86V59 439 aaPredicted RBP8.83□□□□□ -1
SPG11-224ENST00000561268 NIM1KQ8IY84 436 aa8.83□□□□□ -1
SPG11-224ENST00000561268 MPNDQ8N594 471 aa8.83□□□□□ -1
SPG11-224ENST00000561268 PI4KAP1Q8N8J0 262 aa8.83□□□□□ -1
SPG11-224ENST00000561268 MYD88Q99836 296 aa8.83□□□□□ -1
SPG11-224ENST00000561268 MAP3K2Q9Y2U5 619 aa8.83□□□□□ -1
SPG11-224ENST00000561268 CTSWP56202 376 aa8.82□□□□□ -1
SPG11-224ENST00000561268 CXCL9Q07325 125 aa8.82□□□□□ -1
SPG11-224ENST00000561268 DPP8Q6V1X1 898 aaPredicted RBP8.82□□□□□ -1
SPG11-224ENST00000561268 STK31Q9BXU1 1019 aa8.82□□□□□ -1
SPG11-224ENST00000561268 GPRC5DQ9NZD1 345 aa8.82□□□□□ -1
SPG11-224ENST00000561268 PCDH10Q9P2E7 1040 aa8.82□□□□□ -1
SPG11-224ENST00000561268 ZNRF3Q9ULT6 936 aa8.82□□□□□ -1
SPG11-224ENST00000561268 MED23Q9ULK4 1368 aa8.82□□□□□ -1
SPG11-224ENST00000561268 H7C1W4 665 aa8.81□□□□□ -1
SPG11-224ENST00000561268 CCDC152Q4G0S7 254 aa8.81□□□□□ -1
SPG11-224ENST00000561268 USP50Q70EL3 339 aaPredicted RBP8.81□□□□□ -1
SPG11-224ENST00000561268 TSPYL2Q9H2G4 693 aaPredicted RBP8.81□□□□□ -1
SPG11-224ENST00000561268 SEC31BQ9NQW1 1179 aa8.81□□□□□ -1
SPG11-224ENST00000561268 POLLQ9UGP5 575 aa8.81□□□□□ -1
SPG11-224ENST00000561268 EPS15P42566 896 aa8.8□□□□□ -1
SPG11-224ENST00000561268 RPS8P62241 208 aaKnown RBP8.8□□□□□ -1
SPG11-224ENST00000561268 GPSM2P81274 684 aa8.8□□□□□ -1
SPG11-224ENST00000561268 EXOSC9Q06265 439 aaKnown RBP8.8□□□□□ -1
SPG11-224ENST00000561268 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
SPG11-224ENST00000561268 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
SPG11-224ENST00000561268 LINS1Q8NG48 757 aa8.8□□□□□ -1
SPG11-224ENST00000561268 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
SPG11-224ENST00000561268 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
SPG11-224ENST00000561268 DNAAF4Q8WXU2 420 aa8.8□□□□□ -1
SPG11-224ENST00000561268 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
SPG11-224ENST00000561268 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
SPG11-224ENST00000561268 XDHP47989 1333 aa8.8□□□□□ -1
SPG11-224ENST00000561268 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
SPG11-224ENST00000561268 RASSF10A6NK89 507 aa8.79□□□□□ -1
SPG11-224ENST00000561268 LMOD1P29536 600 aaPredicted RBP8.79□□□□□ -1
SPG11-224ENST00000561268 ATN1P54259 1190 aaPredicted RBP8.79□□□□□ -1
SPG11-224ENST00000561268 NEXNQ0ZGT2 675 aa8.79□□□□□ -1
SPG11-224ENST00000561268 GCKRQ14397 625 aa8.79□□□□□ -1
SPG11-224ENST00000561268 RTL5Q5HYW3 569 aaPredicted RBP8.79□□□□□ -1
SPG11-224ENST00000561268 CIAPIN1Q6FI81 312 aa8.79□□□□□ -1
SPG11-224ENST00000561268 DPF2Q92785 391 aa8.79□□□□□ -1
SPG11-224ENST00000561268 FAM163AQ96GL9 167 aaPredicted RBP8.79□□□□□ -1
SPG11-224ENST00000561268 TMX4Q9H1E5 349 aaPredicted RBP8.79□□□□□ -1
SPG11-224ENST00000561268 MYH16Q9H6N6 1097 aa8.79□□□□□ -1
SPG11-224ENST00000561268 ADARB2Q9NS39 739 aaKnown RBP8.79□□□□□ -1
SPG11-224ENST00000561268 TCERG1O14776 1098 aaKnown RBP8.78□□□□□ -1
SPG11-224ENST00000561268 ECE2O60344 883 aa8.78□□□□□ -1
SPG11-224ENST00000561268 CSF1RP07333 972 aa8.78□□□□□ -1
SPG11-224ENST00000561268 RPS12P25398 132 aaKnown RBP8.78□□□□□ -1
SPG11-224ENST00000561268 GMPSP49915 693 aaPredicted RBP8.78□□□□□ -1
SPG11-224ENST00000561268 WASHC4Q2M389 1173 aa8.78□□□□□ -1
SPG11-224ENST00000561268 BEND3Q5T5X7 828 aa8.78□□□□□ -1
SPG11-224ENST00000561268 UBE3BQ7Z3V4 1068 aa8.78□□□□□ -1
SPG11-224ENST00000561268 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
SPG11-224ENST00000561268 ZNF428Q96B54 188 aa8.78□□□□□ -1
SPG11-224ENST00000561268 CDC5LQ99459 802 aaKnown RBP8.78□□□□□ -1
SPG11-224ENST00000561268 GREM2Q9H772 168 aa8.78□□□□□ -1
SPG11-224ENST00000561268 BSDC1Q9NW68 430 aaPredicted RBP8.78□□□□□ -1
SPG11-224ENST00000561268 UTYO14607 1347 aa8.78□□□□□ -1
SPG11-224ENST00000561268 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 PSMD14O00487 310 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1.01
SPG11-224ENST00000561268 TNIP1Q15025 636 aa8.77□□□□□ -1.01
SPG11-224ENST00000561268 EAPPQ56P03 285 aaPredicted RBP8.77□□□□□ -1.01
SPG11-224ENST00000561268 MAP1SQ66K74 1059 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms