RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 GREM2Q9H772 168 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 GPRC5DQ9NZD1 345 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 ZNF521Q96K83 1311 aa14.38□□□□□ -0.11
GABPB1-210ENST00000560825 CDHR2Q9BYE9 1310 aa14.37□□□□□ -0.11
GABPB1-210ENST00000560825 PDE8AO60658 829 aa14.37□□□□□ -0.11
GABPB1-210ENST00000560825 UBE3BQ7Z3V4 1068 aa14.37□□□□□ -0.11
GABPB1-210ENST00000560825 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
GABPB1-210ENST00000560825 TTLL11Q8NHH1 800 aa14.37□□□□□ -0.11
GABPB1-210ENST00000560825 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
GABPB1-210ENST00000560825 C6orf229H3BNL8 230 aa14.36□□□□□ -0.11
GABPB1-210ENST00000560825 PSMD14O00487 310 aa14.36□□□□□ -0.11
GABPB1-210ENST00000560825 DDX58O95786 925 aaKnown RBP14.36□□□□□ -0.11
GABPB1-210ENST00000560825 WASHC4Q2M389 1173 aa14.36□□□□□ -0.11
GABPB1-210ENST00000560825 COL13A1Q5TAT6 717 aaPredicted RBP14.36□□□□□ -0.11
GABPB1-210ENST00000560825 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
GABPB1-210ENST00000560825 H7C1W4 665 aa14.35□□□□□ -0.11
GABPB1-210ENST00000560825 CTSWP56202 376 aa14.35□□□□□ -0.11
GABPB1-210ENST00000560825 CIAPIN1Q6FI81 312 aa14.35□□□□□ -0.11
GABPB1-210ENST00000560825 PNMA8AQ86V59 439 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-210ENST00000560825 SUPT20HQ8NEM7 779 aa14.35□□□□□ -0.11
GABPB1-210ENST00000560825 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
GABPB1-210ENST00000560825 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
GABPB1-210ENST00000560825 ECE2O60344 883 aa14.34□□□□□ -0.11
GABPB1-210ENST00000560825 FKBP5Q13451 457 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-210ENST00000560825 GCKRQ14397 625 aa14.34□□□□□ -0.11
GABPB1-210ENST00000560825 CST9Q5W186 159 aa14.34□□□□□ -0.11
GABPB1-210ENST00000560825 THSD7BQ9C0I4 1608 aa14.34□□□□□ -0.11
GABPB1-210ENST00000560825 ASTN2O75129 1339 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-210ENST00000560825 UFL1O94874 794 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 KLRK1P26718 216 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 LMOD1P29536 600 aaPredicted RBP14.33□□□□□ -0.11
GABPB1-210ENST00000560825 VEGFBP49765 207 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 SAMD7Q7Z3H4 446 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 TMC4Q7Z404 712 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 TMX4Q9H1E5 349 aaPredicted RBP14.33□□□□□ -0.11
GABPB1-210ENST00000560825 PODXL2Q9NZ53 605 aa14.33□□□□□ -0.11
GABPB1-210ENST00000560825 TMEM88BA6NKF7 163 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 HSPA1AP0DMV8 641 aaKnown RBP14.32□□□□□ -0.12
GABPB1-210ENST00000560825 HSPA1BP0DMV9 641 aaKnown RBP14.32□□□□□ -0.12
GABPB1-210ENST00000560825 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 EPHA10Q5JZY3 1008 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 GLIS2Q9BZE0 524 aaPredicted RBP14.32□□□□□ -0.12
GABPB1-210ENST00000560825 ADARB2Q9NS39 739 aaKnown RBP14.32□□□□□ -0.12
GABPB1-210ENST00000560825 CNOT7Q9UIV1 285 aaKnown RBP14.32□□□□□ -0.12
GABPB1-210ENST00000560825 SNAP23O00161 211 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 BEND3Q5T5X7 828 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
GABPB1-210ENST00000560825 MICALL2Q8IY33 904 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 MXD3Q9BW11 206 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 BCL2L13Q9BXK5 485 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 MINPP1Q9UNW1 487 aa14.32□□□□□ -0.12
GABPB1-210ENST00000560825 FOXO4P98177 505 aa14.31□□□□□ -0.12
GABPB1-210ENST00000560825 NEXNQ0ZGT2 675 aa14.31□□□□□ -0.12
GABPB1-210ENST00000560825 TBC1D10BQ4KMP7 808 aaPredicted RBP14.31□□□□□ -0.12
GABPB1-210ENST00000560825 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
GABPB1-210ENST00000560825 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
GABPB1-210ENST00000560825 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
GABPB1-210ENST00000560825 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
GABPB1-210ENST00000560825 GGA1Q9UJY5 639 aa14.3□□□□□ -0.12
GABPB1-210ENST00000560825 SCAF8Q9UPN6 1271 aaKnown RBP14.3□□□□□ -0.12
GABPB1-210ENST00000560825 CSF1RP07333 972 aa14.29□□□□□ -0.12
GABPB1-210ENST00000560825 ITGA6P23229 1130 aa14.29□□□□□ -0.12
GABPB1-210ENST00000560825 TNIP1Q15025 636 aa14.29□□□□□ -0.12
GABPB1-210ENST00000560825 LINS1Q8NG48 757 aa14.29□□□□□ -0.12
GABPB1-210ENST00000560825 XDHP47989 1333 aa14.28□□□□□ -0.12
GABPB1-210ENST00000560825 RASSF10A6NK89 507 aa14.28□□□□□ -0.12
GABPB1-210ENST00000560825 RBM26Q5T8P6 1007 aaKnown RBP14.28□□□□□ -0.12
GABPB1-210ENST00000560825 KAZALD1Q96I82 304 aa14.28□□□□□ -0.12
GABPB1-210ENST00000560825 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
GABPB1-210ENST00000560825 ZC3H12CQ9C0D7 883 aaKnown RBP14.28□□□□□ -0.12
GABPB1-210ENST00000560825 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-210ENST00000560825 FOXN1O15353 648 aa14.27□□□□□ -0.12
GABPB1-210ENST00000560825 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.12
GABPB1-210ENST00000560825 ZNF594Q96JF6 807 aaPredicted RBP14.27□□□□□ -0.12
GABPB1-210ENST00000560825 EYA3Q99504 573 aa14.27□□□□□ -0.12
GABPB1-210ENST00000560825 ABT1Q9ULW3 272 aaKnown RBP14.27□□□□□ -0.12
GABPB1-210ENST00000560825 IRS2Q9Y4H2 1338 aa14.27□□□□□ -0.13
GABPB1-210ENST00000560825 ADM5C9JUS6 153 aa14.26□□□□□ -0.13
GABPB1-210ENST00000560825 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
GABPB1-210ENST00000560825 CYP4F22Q6NT55 531 aa14.26□□□□□ -0.13
GABPB1-210ENST00000560825 USP48Q86UV5 1035 aa14.26□□□□□ -0.13
GABPB1-210ENST00000560825 MRPL50Q8N5N7 158 aaKnown RBP14.26□□□□□ -0.13
GABPB1-210ENST00000560825 HELBQ8NG08 1087 aaPredicted RBP14.26□□□□□ -0.13
GABPB1-210ENST00000560825 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
GABPB1-210ENST00000560825 AOC2O75106 756 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 TAF5LO75529 589 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 DEFB115Q30KQ5 88 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 DPF2Q92785 391 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 GMLQ99445 158 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 CDC5LQ99459 802 aaKnown RBP14.25□□□□□ -0.13
GABPB1-210ENST00000560825 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 MED23Q9ULK4 1368 aa14.25□□□□□ -0.13
GABPB1-210ENST00000560825 CELF2O95319 508 aaKnown RBP14.24□□□□□ -0.13
GABPB1-210ENST00000560825 NBPF7P0C2Y1 421 aaPredicted RBP14.24□□□□□ -0.13
GABPB1-210ENST00000560825 SLFN5Q08AF3 891 aa14.24□□□□□ -0.13
GABPB1-210ENST00000560825 GRM1Q13255 1194 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms